RNA–Protein interactions for RNA: ENSMUST00000115537.1

Col28a1-201, Transcript of Collagen alpha-1(XXVIII) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col28a1, Length 4,230 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col28a1-201ENSMUST00000115537 Gm15557A6PWY0 234 aa6.66□□□□□ -1.34
Col28a1-201ENSMUST00000115537 P01748 117 aa6.66□□□□□ -1.34
Col28a1-201ENSMUST00000115537 Hoxd3P09027 433 aa6.66□□□□□ -1.34
Col28a1-201ENSMUST00000115537 Brk1Q91VR8 75 aa6.66□□□□□ -1.34
Col28a1-201ENSMUST00000115537 Timm17aQ9Z0V8 171 aa6.66□□□□□ -1.34
Col28a1-201ENSMUST00000115537 Bub3Q9WVA3 326 aa6.65□□□□□ -1.34
Col28a1-201ENSMUST00000115537 Kmt2bO08550 2713 aa6.65□□□□□ -1.34
Col28a1-201ENSMUST00000115537 Ang2Q64438 145 aa6.65□□□□□ -1.34
Col28a1-201ENSMUST00000115537 Atp5g1Q9CR84 136 aa6.65□□□□□ -1.34
Col28a1-201ENSMUST00000115537 Trav14d-3-dv8A0A075B619 120 aa6.65□□□□□ -1.35
Col28a1-201ENSMUST00000115537 Igkv4-71A0A0G2JEH0 117 aa6.65□□□□□ -1.35
Col28a1-201ENSMUST00000115537 4930432M17RikQ3V0W9 174 aa6.65□□□□□ -1.35
Col28a1-201ENSMUST00000115537 Arhgap32Q811P8 2089 aa6.64□□□□□ -1.35
Col28a1-201ENSMUST00000115537 Ighv1-52A0A0A6YXC3 117 aa6.64□□□□□ -1.35
Col28a1-201ENSMUST00000115537 Tmem263Q9DAM7 115 aa6.64□□□□□ -1.35
Col28a1-201ENSMUST00000115537 MsmbO08540 113 aa6.64□□□□□ -1.35
Col28a1-201ENSMUST00000115537 Spry2Q9QXV8 315 aa6.64□□□□□ -1.35
Col28a1-201ENSMUST00000115537 Cxcl14Q9WUQ5 99 aa6.64□□□□□ -1.35
Col28a1-201ENSMUST00000115537 Chd6A3KFM7 2711 aa6.64□□□□□ -1.35
Col28a1-201ENSMUST00000115537 Ighv1-80A0A075B5Y3 117 aa6.64□□□□□ -1.35
Col28a1-201ENSMUST00000115537 Minos1Q7TNS2 76 aa6.64□□□□□ -1.35
Col28a1-201ENSMUST00000115537 Col5a1O88207 1838 aa6.63□□□□□ -1.35
Col28a1-201ENSMUST00000115537 Igkv6-13A0A0G2JGY3 119 aa6.63□□□□□ -1.35
Col28a1-201ENSMUST00000115537 E030018B13RikJ3QMS9 113 aa6.63□□□□□ -1.35
Col28a1-201ENSMUST00000115537 Fhl1P97447 280 aaKnown RBP6.63□□□□□ -1.35
Col28a1-201ENSMUST00000115537 Gata4Q08369 441 aa6.63□□□□□ -1.35
Col28a1-201ENSMUST00000115537 Sslp1Q3UN54 99 aa6.63□□□□□ -1.35
Col28a1-201ENSMUST00000115537 1520401A03RikA0A0J9YVH6 598 aa6.63□□□□□ -1.35
Col28a1-201ENSMUST00000115537 TshbP12656 138 aa6.63□□□□□ -1.35
Col28a1-201ENSMUST00000115537 Lyzl4Q9D925 145 aa6.63□□□□□ -1.35
Col28a1-201ENSMUST00000115537 Notch1Q01705 2531 aa6.62□□□□□ -1.35
Col28a1-201ENSMUST00000115537 Rpl35aO55142 110 aa6.62□□□□□ -1.35
Col28a1-201ENSMUST00000115537 Tmem86bQ497J1 226 aa6.62□□□□□ -1.35
Col28a1-201ENSMUST00000115537 Dpm3Q9D1Q4 92 aa6.62□□□□□ -1.35
Col28a1-201ENSMUST00000115537 4930442H23RikQ9D5G7 103 aa6.62□□□□□ -1.35
Col28a1-201ENSMUST00000115537 Trav11A0A0B4J1J9 114 aa6.62□□□□□ -1.35
Col28a1-201ENSMUST00000115537 Gm10553J3QPF1 123 aa6.62□□□□□ -1.35
Col28a1-201ENSMUST00000115537 CrygdP04342 174 aa6.62□□□□□ -1.35
Col28a1-201ENSMUST00000115537 Gm21748Q3UE70 102 aa6.62□□□□□ -1.35
Col28a1-201ENSMUST00000115537 Fam19a4Q7TPG5 135 aa6.62□□□□□ -1.35
Col28a1-201ENSMUST00000115537 Rbm3O89086 153 aaKnown RBP6.62□□□□□ -1.35
Col28a1-201ENSMUST00000115537 GhrhP16043 103 aa6.61□□□□□ -1.35
Col28a1-201ENSMUST00000115537 AW146154Q3TPQ7 468 aa6.61□□□□□ -1.35
Col28a1-201ENSMUST00000115537 Cd99Q8VCN6 175 aa6.61□□□□□ -1.35
Col28a1-201ENSMUST00000115537 Smim26Q3V460 107 aa6.61□□□□□ -1.35
Col28a1-201ENSMUST00000115537 Hivep1Q03172 2688 aa6.61□□□□□ -1.35
Col28a1-201ENSMUST00000115537 Ighv12-3A0A075B5T1 117 aa6.61□□□□□ -1.35
Col28a1-201ENSMUST00000115537 SbsponQ3UPR9 264 aa6.61□□□□□ -1.35
Col28a1-201ENSMUST00000115537 9430069I07RikQ9CX21 111 aa6.61□□□□□ -1.35
Col28a1-201ENSMUST00000115537 Ighv1-4A0A075B5T4 117 aa6.61□□□□□ -1.35
Col28a1-201ENSMUST00000115537 Gm26661M0QWV4 156 aa6.61□□□□□ -1.35
Col28a1-201ENSMUST00000115537 Wdfy3Q6VNB8 3508 aa6.6□□□□□ -1.35
Col28a1-201ENSMUST00000115537 Ss18Q62280 418 aa6.6□□□□□ -1.35
Col28a1-201ENSMUST00000115537 Cfap126Q6P8X9 189 aa6.6□□□□□ -1.35
Col28a1-201ENSMUST00000115537 CenpwQ3URR0 86 aa6.6□□□□□ -1.35
Col28a1-201ENSMUST00000115537 Trdv5A0A075B661 115 aa6.6□□□□□ -1.35
Col28a1-201ENSMUST00000115537 FcorP0DJI6 106 aa6.6□□□□□ -1.35
Col28a1-201ENSMUST00000115537 C1qcQ02105 246 aa6.6□□□□□ -1.35
Col28a1-201ENSMUST00000115537 Crlf1Q9JM58 425 aa6.6□□□□□ -1.35
Col28a1-201ENSMUST00000115537 Gm4861Q8C5A4 106 aa6.59□□□□□ -1.35
Col28a1-201ENSMUST00000115537 Ighv1-53A0A075B5W3 117 aa6.59□□□□□ -1.35
Col28a1-201ENSMUST00000115537 Igkv4-74A0A0B4J1I3 119 aa6.59□□□□□ -1.35
Col28a1-201ENSMUST00000115537 AngP21570 145 aa6.59□□□□□ -1.35
Col28a1-201ENSMUST00000115537 SelenowP63300 88 aa6.59□□□□□ -1.35
Col28a1-201ENSMUST00000115537 Ube2e2Q91W82 201 aa6.59□□□□□ -1.35
Col28a1-201ENSMUST00000115537 Gm5878E9PUB3 99 aa6.59□□□□□ -1.35
Col28a1-201ENSMUST00000115537 Gm3250E9Q1M3 230 aa6.59□□□□□ -1.35
Col28a1-201ENSMUST00000115537 Socs3O35718 225 aa6.59□□□□□ -1.35
Col28a1-201ENSMUST00000115537 Ndufb4Q9CQC7 129 aa6.59□□□□□ -1.35
Col28a1-201ENSMUST00000115537 MplkipQ9D011 178 aa6.59□□□□□ -1.35
Col28a1-201ENSMUST00000115537 Wfdc15bQ9JHY4 80 aa6.59□□□□□ -1.35
Col28a1-201ENSMUST00000115537 Trav13d-1A0A075B606 110 aa6.58□□□□□ -1.36
Col28a1-201ENSMUST00000115537 OdaphJ3QNT8 126 aa6.58□□□□□ -1.36
Col28a1-201ENSMUST00000115537 1500011B03RikQ3TTH7 73 aa6.58□□□□□ -1.36
Col28a1-201ENSMUST00000115537 Naa38Q9D2U5 125 aa6.58□□□□□ -1.36
Col28a1-201ENSMUST00000115537 Hcfc1Q61191 2045 aaKnown RBP6.58□□□□□ -1.36
Col28a1-201ENSMUST00000115537 Fn1P11276 2477 aaKnown RBP6.58□□□□□ -1.36
Col28a1-201ENSMUST00000115537 Adgrg4B7ZCC9 3073 aa6.58□□□□□ -1.36
Col28a1-201ENSMUST00000115537 Trbv30A0A0B4J1P1 111 aa6.58□□□□□ -1.36
Col28a1-201ENSMUST00000115537 Gm20499D3Z4G5 72 aa6.58□□□□□ -1.36
Col28a1-201ENSMUST00000115537 MifP34884 115 aaKnown RBP6.58□□□□□ -1.36
Col28a1-201ENSMUST00000115537 Tmem258P61166 79 aa6.58□□□□□ -1.36
Col28a1-201ENSMUST00000115537 Spag11Q8K4N2 71 aa6.58□□□□□ -1.36
Col28a1-201ENSMUST00000115537 FlncQ8VHX6 2726 aaKnown RBP6.58□□□□□ -1.36
Col28a1-201ENSMUST00000115537 Gm16381A0A1Y7VKT9 73 aa6.57□□□□□ -1.36
Col28a1-201ENSMUST00000115537 Gm9513B3GLJ6 99 aa6.57□□□□□ -1.36
Col28a1-201ENSMUST00000115537 Zzef1Q5SSH7 2924 aa6.57□□□□□ -1.36
Col28a1-201ENSMUST00000115537 Trav4-3A0A0B4J1K1 110 aa6.57□□□□□ -1.36
Col28a1-201ENSMUST00000115537 Igkv4-53A0A0G2JFC6 119 aa6.57□□□□□ -1.36
Col28a1-201ENSMUST00000115537 P84751 237 aa6.57□□□□□ -1.36
Col28a1-201ENSMUST00000115537 Klk1b4P00757 256 aa6.57□□□□□ -1.36
Col28a1-201ENSMUST00000115537 Dand5Q76LW6 185 aa6.57□□□□□ -1.36
Col28a1-201ENSMUST00000115537 Ifitm1Q9D103 106 aa6.57□□□□□ -1.36
Col28a1-201ENSMUST00000115537 Spink12Q9D256 87 aa6.57□□□□□ -1.36
Col28a1-201ENSMUST00000115537 Ighv1-74A0A0G2JGK2 117 aa6.56□□□□□ -1.36
Col28a1-201ENSMUST00000115537 P01747 120 aa6.56□□□□□ -1.36
Col28a1-201ENSMUST00000115537 PlaurP35456 327 aa6.56□□□□□ -1.36
Col28a1-201ENSMUST00000115537 Zfand3Q497H0 227 aa6.56□□□□□ -1.36
Col28a1-201ENSMUST00000115537 PemtQ61907 199 aa6.56□□□□□ -1.36
Col28a1-201ENSMUST00000115537 Polr2kQ63871 58 aa6.56□□□□□ -1.36
Retrieved 100 of 22,080 RNA–protein pairs in 34.7 ms