RNA–Protein interactions for RNA: ENSMUST00000113335.3

Ubr2-201, Transcript of E3 ubiquitin-protein ligase UBR2, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ubr2, Length 5,691 nt, Biotype protein coding, Subcellular localisation Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr2-201ENSMUST00000113335 Pde6gP09174 87 aa11.78□□□□□ -0.52
Ubr2-201ENSMUST00000113335 Igkv4-92A0A0B4J1I2 117 aa11.77□□□□□ -0.52
Ubr2-201ENSMUST00000113335 FcorP0DJI6 106 aa11.77□□□□□ -0.52
Ubr2-201ENSMUST00000113335 Ypel4Q65Z93 127 aa11.77□□□□□ -0.52
Ubr2-201ENSMUST00000113335 Sorl1O88307 2215 aaKnown RBP11.77□□□□□ -0.52
Ubr2-201ENSMUST00000113335 Gm5629P06327 117 aa11.77□□□□□ -0.52
Ubr2-201ENSMUST00000113335 Ndufs5Q99LY9 106 aa11.77□□□□□ -0.52
Ubr2-201ENSMUST00000113335 Gm28539A0A087WSL9 92 aa11.77□□□□□ -0.53
Ubr2-201ENSMUST00000113335 Gm17521F6QAC8 156 aa11.77□□□□□ -0.53
Ubr2-201ENSMUST00000113335 Q9CX25 107 aa11.77□□□□□ -0.53
Ubr2-201ENSMUST00000113335 Tcf20Q9EPQ8 1987 aa11.76□□□□□ -0.53
Ubr2-201ENSMUST00000113335 Ighv1-82A0A0G2JEU7 117 aa11.76□□□□□ -0.53
Ubr2-201ENSMUST00000113335 Ufsp1Q9CZP0 217 aa11.76□□□□□ -0.53
Ubr2-201ENSMUST00000113335 Sprr3O09116 238 aa11.76□□□□□ -0.53
Ubr2-201ENSMUST00000113335 Prr15lQ8JZM2 100 aa11.76□□□□□ -0.53
Ubr2-201ENSMUST00000113335 2010109I03RikQ9CQ11 111 aa11.75□□□□□ -0.53
Ubr2-201ENSMUST00000113335 Col24a1Q30D77 1733 aa11.75□□□□□ -0.53
Ubr2-201ENSMUST00000113335 Eif4ebp1Q60876 117 aa11.75□□□□□ -0.53
Ubr2-201ENSMUST00000113335 Gphb5Q812B2 130 aa11.75□□□□□ -0.53
Ubr2-201ENSMUST00000113335 Eml6Q5SQM0 1958 aa11.75□□□□□ -0.53
Ubr2-201ENSMUST00000113335 Esm1Q9QYY7 184 aa11.75□□□□□ -0.53
Ubr2-201ENSMUST00000113335 Col4a6B1AVK5 1691 aa11.75□□□□□ -0.53
Ubr2-201ENSMUST00000113335 Ly6hQ9WUC3 139 aa11.74□□□□□ -0.53
Ubr2-201ENSMUST00000113335 Gm10401E9Q3K6 71 aa11.74□□□□□ -0.53
Ubr2-201ENSMUST00000113335 Klk9Q32M27 251 aa11.74□□□□□ -0.53
Ubr2-201ENSMUST00000113335 PtprsB0V2N1 1907 aa11.73□□□□□ -0.53
Ubr2-201ENSMUST00000113335 Gm1968Q3T9I3 115 aa11.73□□□□□ -0.53
Ubr2-201ENSMUST00000113335 Rnf185Q91YT2 192 aa11.73□□□□□ -0.53
Ubr2-201ENSMUST00000113335 Dido1Q8C9B9 2256 aaKnown RBP11.73□□□□□ -0.53
Ubr2-201ENSMUST00000113335 EnhoQ8K1D8 76 aa11.73□□□□□ -0.53
Ubr2-201ENSMUST00000113335 Plxnb3Q9QY40 1902 aa11.73□□□□□ -0.53
Ubr2-201ENSMUST00000113335 Wipf1Q8K1I7 493 aa11.73□□□□□ -0.53
Ubr2-201ENSMUST00000113335 CtrlQ9ER05 264 aa11.73□□□□□ -0.53
Ubr2-201ENSMUST00000113335 Ighv8-5A0A0A6YY60 119 aa11.72□□□□□ -0.53
Ubr2-201ENSMUST00000113335 Znf239P24399 201 aa11.72□□□□□ -0.53
Ubr2-201ENSMUST00000113335 4930535I16RikQ9CUI2 172 aa11.72□□□□□ -0.53
Ubr2-201ENSMUST00000113335 Fam19a1Q7TPG8 133 aa11.72□□□□□ -0.53
Ubr2-201ENSMUST00000113335 Vpreb1P13372 142 aa11.72□□□□□ -0.53
Ubr2-201ENSMUST00000113335 Igkv3-4A0A140T8Q4 119 aa11.71□□□□□ -0.53
Ubr2-201ENSMUST00000113335 Ndufc1Q9CQY9 76 aa11.71□□□□□ -0.53
Ubr2-201ENSMUST00000113335 Tcte2E9PY37 120 aa11.71□□□□□ -0.53
Ubr2-201ENSMUST00000113335 Lmo4P61969 165 aa11.71□□□□□ -0.54
Ubr2-201ENSMUST00000113335 Ighv2-3A0A075B696 115 aa11.7□□□□□ -0.54
Ubr2-201ENSMUST00000113335 Rnf152Q8BG47 203 aa11.7□□□□□ -0.54
Ubr2-201ENSMUST00000113335 BtcQ05928 177 aa11.69□□□□□ -0.54
Ubr2-201ENSMUST00000113335 Ube2d4D3YUH6 135 aa11.69□□□□□ -0.54
Ubr2-201ENSMUST00000113335 Wdr38Q9D994 303 aa11.69□□□□□ -0.54
Ubr2-201ENSMUST00000113335 P01729 129 aa11.69□□□□□ -0.54
Ubr2-201ENSMUST00000113335 TshbP12656 138 aa11.69□□□□□ -0.54
Ubr2-201ENSMUST00000113335 Rbx1P62878 108 aa11.69□□□□□ -0.54
Ubr2-201ENSMUST00000113335 Arhgef17Q80U35 2057 aa11.69□□□□□ -0.54
Ubr2-201ENSMUST00000113335 Gm12689Q8BQU9 117 aa11.69□□□□□ -0.54
Ubr2-201ENSMUST00000113335 Brwd1Q921C3 2304 aa11.69□□□□□ -0.54
Ubr2-201ENSMUST00000113335 Wisp2Q9Z0G4 251 aa11.68□□□□□ -0.54
Ubr2-201ENSMUST00000113335 Igkv3-3A0A140T8Q0 119 aa11.68□□□□□ -0.54
Ubr2-201ENSMUST00000113335 1700074P13RikQ9D9G7 251 aa11.68□□□□□ -0.54
Ubr2-201ENSMUST00000113335 Sec61gP60060 68 aa11.67□□□□□ -0.54
Ubr2-201ENSMUST00000113335 C1qcQ02105 246 aa11.67□□□□□ -0.54
Ubr2-201ENSMUST00000113335 E130116L18RikQ8BMV6 101 aa11.67□□□□□ -0.54
Ubr2-201ENSMUST00000113335 Lypd6Q8BPP5 171 aa11.67□□□□□ -0.54
Ubr2-201ENSMUST00000113335 1520401A03RikA0A0J9YVH6 598 aa11.67□□□□□ -0.54
Ubr2-201ENSMUST00000113335 Ighv1-63A0A075B5X2 117 aa11.67□□□□□ -0.54
Ubr2-201ENSMUST00000113335 Ighv1-61P01749 117 aa11.67□□□□□ -0.54
Ubr2-201ENSMUST00000113335 Pla2g2dQ9WVF6 144 aa11.67□□□□□ -0.54
Ubr2-201ENSMUST00000113335 Igkv1-117A0A140T8M0 119 aa11.66□□□□□ -0.54
Ubr2-201ENSMUST00000113335 Pip4p1Q3TWL2 284 aa11.66□□□□□ -0.54
Ubr2-201ENSMUST00000113335 Q9D8Q6 235 aa11.66□□□□□ -0.54
Ubr2-201ENSMUST00000113335 Dopey1Q8BL99 2399 aa11.66□□□□□ -0.54
Ubr2-201ENSMUST00000113335 Ighv1-62-1A0A075B5U3 116 aa11.66□□□□□ -0.54
Ubr2-201ENSMUST00000113335 Spry2Q9QXV8 315 aa11.66□□□□□ -0.54
Ubr2-201ENSMUST00000113335 HelzQ6DFV5 1964 aaKnown RBP11.66□□□□□ -0.54
Ubr2-201ENSMUST00000113335 Igkv1-110A0A0B4J1I0 119 aa11.66□□□□□ -0.54
Ubr2-201ENSMUST00000113335 Cox7bP56393 80 aa11.65□□□□□ -0.54
Ubr2-201ENSMUST00000113335 Plac8l1Q08EJ0 177 aa11.65□□□□□ -0.54
Ubr2-201ENSMUST00000113335 ScxQ64124 207 aa11.65□□□□□ -0.54
Ubr2-201ENSMUST00000113335 Psmb8P28063 276 aa11.65□□□□□ -0.54
Ubr2-201ENSMUST00000113335 Pou2af1Q64693 256 aa11.65□□□□□ -0.54
Ubr2-201ENSMUST00000113335 P06320 134 aa11.65□□□□□ -0.54
Ubr2-201ENSMUST00000113335 H2al1bA0A087WP11 105 aa11.64□□□□□ -0.55
Ubr2-201ENSMUST00000113335 A130051J06RikQ8CAU1 227 aa11.64□□□□□ -0.55
Ubr2-201ENSMUST00000113335 Gm9805F6YK59 57 aa11.63□□□□□ -0.55
Ubr2-201ENSMUST00000113335 Defb13Q8R2I4 64 aa11.63□□□□□ -0.55
Ubr2-201ENSMUST00000113335 Notch4P31695 1964 aa11.63□□□□□ -0.55
Ubr2-201ENSMUST00000113335 1110002E22RikE0CYV9 1786 aa11.63□□□□□ -0.55
Ubr2-201ENSMUST00000113335 Ly6c2P0CW03 131 aa11.62□□□□□ -0.55
Ubr2-201ENSMUST00000113335 Timm17bQ9Z0V7 172 aa11.62□□□□□ -0.55
Ubr2-201ENSMUST00000113335 Ighv1-72P01751 139 aa11.62□□□□□ -0.55
Ubr2-201ENSMUST00000113335 H2al1aQ5M8Q2 105 aa11.62□□□□□ -0.55
Ubr2-201ENSMUST00000113335 H2al1eQ810S6 105 aa11.62□□□□□ -0.55
Ubr2-201ENSMUST00000113335 Gm16223Q8CBM3 117 aa11.62□□□□□ -0.55
Ubr2-201ENSMUST00000113335 A830005F24RikQ8BRT5 167 aa11.62□□□□□ -0.55
Ubr2-201ENSMUST00000113335 Fgf23Q9EPC2 251 aa11.62□□□□□ -0.55
Ubr2-201ENSMUST00000113335 9430015G10RikA2ASP7 199 aa11.61□□□□□ -0.55
Ubr2-201ENSMUST00000113335 Nup210Q9QY81 1886 aaKnown RBP11.61□□□□□ -0.55
Ubr2-201ENSMUST00000113335 NpwA0A1L1STR8 176 aa11.61□□□□□ -0.55
Ubr2-201ENSMUST00000113335 Fgfbp3Q1HCM0 245 aa11.61□□□□□ -0.55
Ubr2-201ENSMUST00000113335 Trav14-1A0A0G2JF94 121 aa11.61□□□□□ -0.55
Ubr2-201ENSMUST00000113335 Ighv10-1A0A0B4J1J6 119 aa11.6□□□□□ -0.55
Ubr2-201ENSMUST00000113335 U90926O08546 118 aa11.6□□□□□ -0.55
Ubr2-201ENSMUST00000113335 Gm12057A0A087WR21 115 aa11.6□□□□□ -0.55
Retrieved 100 of 22,080 RNA–protein pairs in 48.4 ms