RNA–Protein interactions for RNA: ENSMUST00000108362.7

Sptbn4-202, Transcript of Spectrin beta chain, mousemouse

TSL 1 (best) BASIC

Gene Sptbn4, Length 4,861 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sptbn4-202ENSMUST00000108362 Tcf20Q9EPQ8 1987 aa12.29□□□□□ -0.44
Sptbn4-202ENSMUST00000108362 Usp9xP70398 2559 aaKnown RBP12.29□□□□□ -0.44
Sptbn4-202ENSMUST00000108362 Piezo1E2JF22 2547 aa12.28□□□□□ -0.44
Sptbn4-202ENSMUST00000108362 BtcQ05928 177 aa12.28□□□□□ -0.44
Sptbn4-202ENSMUST00000108362 Ppp1r32Q148A4 427 aa12.28□□□□□ -0.44
Sptbn4-202ENSMUST00000108362 9130230L23RikQ8CC80 163 aa12.28□□□□□ -0.44
Sptbn4-202ENSMUST00000108362 P18527 97 aa12.28□□□□□ -0.44
Sptbn4-202ENSMUST00000108362 Vpreb2P13373 142 aa12.27□□□□□ -0.44
Sptbn4-202ENSMUST00000108362 Gm14137Q8CE97 175 aa12.27□□□□□ -0.44
Sptbn4-202ENSMUST00000108362 Tmem213Q08EA8 116 aa12.26□□□□□ -0.45
Sptbn4-202ENSMUST00000108362 Cfc1P97766 202 aa12.26□□□□□ -0.45
Sptbn4-202ENSMUST00000108362 Gm9958Q8C9U4 106 aa12.26□□□□□ -0.45
Sptbn4-202ENSMUST00000108362 CtrlQ9ER05 264 aa12.26□□□□□ -0.45
Sptbn4-202ENSMUST00000108362 Gm3618D3Z4P5 127 aa12.25□□□□□ -0.45
Sptbn4-202ENSMUST00000108362 Gm1968Q3T9I3 115 aa12.25□□□□□ -0.45
Sptbn4-202ENSMUST00000108362 Zfand3Q497H0 227 aa12.25□□□□□ -0.45
Sptbn4-202ENSMUST00000108362 Wdr38Q9D994 303 aa12.25□□□□□ -0.45
Sptbn4-202ENSMUST00000108362 Gm42715A0A087WP63 3095 aaKnown RBP12.25□□□□□ -0.45
Sptbn4-202ENSMUST00000108362 Gm5878E9PUB3 99 aa12.24□□□□□ -0.45
Sptbn4-202ENSMUST00000108362 Odf3Q920N1 254 aa12.24□□□□□ -0.45
Sptbn4-202ENSMUST00000108362 P01747 120 aa12.23□□□□□ -0.45
Sptbn4-202ENSMUST00000108362 Znf239P24399 201 aa12.23□□□□□ -0.45
Sptbn4-202ENSMUST00000108362 Rpl39lQ9CQD0 51 aa12.23□□□□□ -0.45
Sptbn4-202ENSMUST00000108362 Ankhd1E9PUR0 2548 aaKnown RBP12.23□□□□□ -0.45
Sptbn4-202ENSMUST00000108362 A230072I06RikQ3UUJ8 172 aa12.23□□□□□ -0.45
Sptbn4-202ENSMUST00000108362 Wipf1Q8K1I7 493 aa12.23□□□□□ -0.45
Sptbn4-202ENSMUST00000108362 Cox7b2Q9D2H1 82 aa12.22□□□□□ -0.45
Sptbn4-202ENSMUST00000108362 Gm12057A0A087WR21 115 aa12.22□□□□□ -0.45
Sptbn4-202ENSMUST00000108362 FcorP0DJI6 106 aa12.22□□□□□ -0.45
Sptbn4-202ENSMUST00000108362 Sh2d1aO88890 126 aa12.22□□□□□ -0.45
Sptbn4-202ENSMUST00000108362 Gm5629P06327 117 aa12.21□□□□□ -0.45
Sptbn4-202ENSMUST00000108362 Fxyd5P97808 178 aa12.21□□□□□ -0.45
Sptbn4-202ENSMUST00000108362 9530003J23RikQ8BM26 151 aa12.21□□□□□ -0.45
Sptbn4-202ENSMUST00000108362 Rpl18aP62717 176 aaKnown RBP12.21□□□□□ -0.45
Sptbn4-202ENSMUST00000108362 4930470P17RikQ9D542 155 aa12.21□□□□□ -0.45
Sptbn4-202ENSMUST00000108362 Ighv12-3A0A075B5T1 117 aa12.21□□□□□ -0.46
Sptbn4-202ENSMUST00000108362 Ighv1-82A0A0G2JEU7 117 aa12.21□□□□□ -0.46
Sptbn4-202ENSMUST00000108362 Gm37389A0A0A6YW05 95 aa12.2□□□□□ -0.46
Sptbn4-202ENSMUST00000108362 Ighv8-5A0A0A6YY60 119 aa12.2□□□□□ -0.46
Sptbn4-202ENSMUST00000108362 Vpreb3D3Z6J4 130 aa12.2□□□□□ -0.46
Sptbn4-202ENSMUST00000108362 Gm17577J3QNF7 156 aa12.2□□□□□ -0.46
Sptbn4-202ENSMUST00000108362 Vpreb1P13372 142 aa12.2□□□□□ -0.46
Sptbn4-202ENSMUST00000108362 Zc2hc1bQ9D534 172 aa12.2□□□□□ -0.46
Sptbn4-202ENSMUST00000108362 Igkv8-18A0A0B4J1J3 123 aa12.2□□□□□ -0.46
Sptbn4-202ENSMUST00000108362 Fhl1P97447 280 aaKnown RBP12.19□□□□□ -0.46
Sptbn4-202ENSMUST00000108362 Tet2Q4JK59 1912 aaKnown RBP12.19□□□□□ -0.46
Sptbn4-202ENSMUST00000108362 Igkv3-10A0A0G2JGN0 119 aa12.18□□□□□ -0.46
Sptbn4-202ENSMUST00000108362 Tmem223Q9CQE2 199 aaKnown RBP12.18□□□□□ -0.46
Sptbn4-202ENSMUST00000108362 Setd2E9Q5F9 2537 aa12.18□□□□□ -0.46
Sptbn4-202ENSMUST00000108362 Pde6gP09174 87 aa12.17□□□□□ -0.46
Sptbn4-202ENSMUST00000108362 Flg2Q2VIS4 2362 aa12.17□□□□□ -0.46
Sptbn4-202ENSMUST00000108362 Usp34Q6ZQ93 3582 aa12.17□□□□□ -0.46
Sptbn4-202ENSMUST00000108362 Ly6hQ9WUC3 139 aa12.17□□□□□ -0.46
Sptbn4-202ENSMUST00000108362 AgrnA2ASQ1 1950 aa12.17□□□□□ -0.46
Sptbn4-202ENSMUST00000108362 Reg3bP35230 175 aa12.16□□□□□ -0.46
Sptbn4-202ENSMUST00000108362 Q9CX25 107 aa12.16□□□□□ -0.46
Sptbn4-202ENSMUST00000108362 C1qcQ02105 246 aa12.16□□□□□ -0.46
Sptbn4-202ENSMUST00000108362 Ufsp1Q9CZP0 217 aa12.16□□□□□ -0.46
Sptbn4-202ENSMUST00000108362 Notch4P31695 1964 aa12.16□□□□□ -0.46
Sptbn4-202ENSMUST00000108362 Ebi3O35228 228 aa12.16□□□□□ -0.46
Sptbn4-202ENSMUST00000108362 Pla2g2eQ9QUL3 142 aa12.15□□□□□ -0.46
Sptbn4-202ENSMUST00000108362 CrygcQ61597 174 aa12.15□□□□□ -0.46
Sptbn4-202ENSMUST00000108362 B9d2Q3UK10 175 aa12.15□□□□□ -0.46
Sptbn4-202ENSMUST00000108362 EnhoQ8K1D8 76 aa12.15□□□□□ -0.46
Sptbn4-202ENSMUST00000108362 Rnf185Q91YT2 192 aa12.15□□□□□ -0.47
Sptbn4-202ENSMUST00000108362 4930535I16RikQ9CUI2 172 aa12.15□□□□□ -0.47
Sptbn4-202ENSMUST00000108362 Trav9n-4A0A075B631 113 aa12.14□□□□□ -0.47
Sptbn4-202ENSMUST00000108362 Prr15lQ8JZM2 100 aa12.14□□□□□ -0.47
Sptbn4-202ENSMUST00000108362 P01745 121 aa12.14□□□□□ -0.47
Sptbn4-202ENSMUST00000108362 Higd2aQ9CQJ1 106 aa12.14□□□□□ -0.47
Sptbn4-202ENSMUST00000108362 Wdr90Q6ZPG2 1874 aa12.14□□□□□ -0.47
Sptbn4-202ENSMUST00000108362 Fer1l4A3KGK3 1992 aa12.14□□□□□ -0.47
Sptbn4-202ENSMUST00000108362 Klk9Q32M27 251 aa12.13□□□□□ -0.47
Sptbn4-202ENSMUST00000108362 Ighv1-75A0A075B5Y2 117 aa12.13□□□□□ -0.47
Sptbn4-202ENSMUST00000108362 2010109I03RikQ9CQ11 111 aa12.12□□□□□ -0.47
Sptbn4-202ENSMUST00000108362 Ptpn13Q64512 2453 aa12.12□□□□□ -0.47
Sptbn4-202ENSMUST00000108362 Psmb8P28063 276 aa12.12□□□□□ -0.47
Sptbn4-202ENSMUST00000108362 Lypd6Q8BPP5 171 aa12.12□□□□□ -0.47
Sptbn4-202ENSMUST00000108362 Ighv1-85A0A075B5Y6 117 aa12.12□□□□□ -0.47
Sptbn4-202ENSMUST00000108362 Tfpi2O35536 230 aa12.12□□□□□ -0.47
Sptbn4-202ENSMUST00000108362 Gm12353A2AGJ4 60 aa12.11□□□□□ -0.47
Sptbn4-202ENSMUST00000108362 Nsun4C4P6S0 806 aaKnown RBP12.11□□□□□ -0.47
Sptbn4-202ENSMUST00000108362 Gm10401E9Q3K6 71 aa12.11□□□□□ -0.47
Sptbn4-202ENSMUST00000108362 P01820 115 aa12.11□□□□□ -0.47
Sptbn4-202ENSMUST00000108362 Gm17521F6QAC8 156 aa12.11□□□□□ -0.47
Sptbn4-202ENSMUST00000108362 SptssbQ925E8 76 aa12.11□□□□□ -0.47
Sptbn4-202ENSMUST00000108362 Gm9913Q8BQQ2 135 aa12.1□□□□□ -0.47
Sptbn4-202ENSMUST00000108362 Ube2aQ9Z255 152 aa12.1□□□□□ -0.47
Sptbn4-202ENSMUST00000108362 P06320 134 aa12.1□□□□□ -0.47
Sptbn4-202ENSMUST00000108362 Gm12689Q8BQU9 117 aa12.1□□□□□ -0.47
Sptbn4-202ENSMUST00000108362 Ndufs5Q99LY9 106 aa12.1□□□□□ -0.47
Sptbn4-202ENSMUST00000108362 Ube2d4D3YUH6 135 aa12.09□□□□□ -0.47
Sptbn4-202ENSMUST00000108362 Ndufc1Q9CQY9 76 aa12.09□□□□□ -0.47
Sptbn4-202ENSMUST00000108362 Igkv3-5A0A140T8M6 119 aa12.09□□□□□ -0.47
Sptbn4-202ENSMUST00000108362 Ighv2-3A0A075B696 115 aa12.09□□□□□ -0.47
Sptbn4-202ENSMUST00000108362 Sprr3O09116 238 aa12.09□□□□□ -0.47
Sptbn4-202ENSMUST00000108362 Igkv4-92A0A0B4J1I2 117 aa12.08□□□□□ -0.48
Sptbn4-202ENSMUST00000108362 Defb18Q30KP5 85 aa12.08□□□□□ -0.48
Sptbn4-202ENSMUST00000108362 ScxQ64124 207 aa12.08□□□□□ -0.48
Sptbn4-202ENSMUST00000108362 1700012A03RikQ9DAF1 130 aa12.08□□□□□ -0.48
Retrieved 100 of 22,080 RNA–protein pairs in 100.5 ms