RNA–Protein interactions for RNA: ENSMUST00000082209.12

Scn8a-201, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Scn8a, Length 11,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-201ENSMUST00000082209 Gm2916Q9D9B9 127 aa7.94□□□□□ -1.14
Scn8a-201ENSMUST00000082209 A130051J06RikQ8CAU1 227 aa7.94□□□□□ -1.14
Scn8a-201ENSMUST00000082209 1700012A03RikQ9DAF1 130 aa7.94□□□□□ -1.14
Scn8a-201ENSMUST00000082209 Gm20708H3BKF4 155 aa7.94□□□□□ -1.14
Scn8a-201ENSMUST00000082209 Gm10553J3QPF1 123 aa7.94□□□□□ -1.14
Scn8a-201ENSMUST00000082209 Fam19a4Q7TPG5 135 aa7.94□□□□□ -1.14
Scn8a-201ENSMUST00000082209 Tfpi2O35536 230 aa7.93□□□□□ -1.14
Scn8a-201ENSMUST00000082209 MifP34884 115 aaKnown RBP7.93□□□□□ -1.14
Scn8a-201ENSMUST00000082209 Gm10322F7D7I4 111 aa7.93□□□□□ -1.14
Scn8a-201ENSMUST00000082209 Cox8cA6H666 72 aa7.93□□□□□ -1.14
Scn8a-201ENSMUST00000082209 Gm17577J3QNF7 156 aa7.93□□□□□ -1.14
Scn8a-201ENSMUST00000082209 BlcapP62951 87 aa7.93□□□□□ -1.14
Scn8a-201ENSMUST00000082209 Gm17324Q8C6J8 137 aa7.93□□□□□ -1.14
Scn8a-201ENSMUST00000082209 Chchd7Q8K2Q5 85 aa7.93□□□□□ -1.14
Scn8a-201ENSMUST00000082209 Ighv3-3A0A0A6YWL2 116 aa7.92□□□□□ -1.14
Scn8a-201ENSMUST00000082209 P01728 117 aa7.92□□□□□ -1.14
Scn8a-201ENSMUST00000082209 9430015G10RikA2ASP7 199 aa7.92□□□□□ -1.14
Scn8a-201ENSMUST00000082209 Cfc1P97766 202 aa7.92□□□□□ -1.14
Scn8a-201ENSMUST00000082209 Ube2aQ9Z255 152 aa7.92□□□□□ -1.14
Scn8a-201ENSMUST00000082209 C2cd3Q52KB6 2323 aa7.92□□□□□ -1.14
Scn8a-201ENSMUST00000082209 Rpl18aP62717 176 aaKnown RBP7.92□□□□□ -1.14
Scn8a-201ENSMUST00000082209 PpdpfQ9CR37 115 aa7.92□□□□□ -1.14
Scn8a-201ENSMUST00000082209 Ndufb1P0DN34 57 aa7.92□□□□□ -1.14
Scn8a-201ENSMUST00000082209 Ighv1-82A0A0G2JEU7 117 aa7.91□□□□□ -1.14
Scn8a-201ENSMUST00000082209 Spink10Q8CAC8 162 aa7.91□□□□□ -1.14
Scn8a-201ENSMUST00000082209 Cox7a1P56392 80 aa7.91□□□□□ -1.14
Scn8a-201ENSMUST00000082209 Reg3bP35230 175 aa7.91□□□□□ -1.14
Scn8a-201ENSMUST00000082209 Ighv8-5A0A0A6YY60 119 aa7.91□□□□□ -1.14
Scn8a-201ENSMUST00000082209 Spag11Q8K4N2 71 aa7.9□□□□□ -1.14
Scn8a-201ENSMUST00000082209 Gm7257D3YX25 99 aa7.9□□□□□ -1.14
Scn8a-201ENSMUST00000082209 P01820 115 aa7.9□□□□□ -1.14
Scn8a-201ENSMUST00000082209 Mapk1ip1lQ8BH93 242 aa7.9□□□□□ -1.14
Scn8a-201ENSMUST00000082209 Triap1Q9D8Z2 76 aa7.9□□□□□ -1.14
Scn8a-201ENSMUST00000082209 Ighv13-2A0A0A6YWN3 119 aa7.9□□□□□ -1.14
Scn8a-201ENSMUST00000082209 NbasE9Q411 2356 aa7.9□□□□□ -1.15
Scn8a-201ENSMUST00000082209 Gm17472A0A075B683 117 aa7.9□□□□□ -1.15
Scn8a-201ENSMUST00000082209 Ube2d4D3YUH6 135 aa7.9□□□□□ -1.15
Scn8a-201ENSMUST00000082209 OdaphJ3QNT8 126 aa7.9□□□□□ -1.15
Scn8a-201ENSMUST00000082209 Vpreb1P13372 142 aa7.9□□□□□ -1.15
Scn8a-201ENSMUST00000082209 Igf1P05017 153 aa7.89□□□□□ -1.15
Scn8a-201ENSMUST00000082209 Rnf152Q8BG47 203 aa7.89□□□□□ -1.15
Scn8a-201ENSMUST00000082209 Gm42674D3YUT9 64 aa7.89□□□□□ -1.15
Scn8a-201ENSMUST00000082209 Gm6034E9Q101 117 aa7.89□□□□□ -1.15
Scn8a-201ENSMUST00000082209 Smr3aQ61900 147 aa7.89□□□□□ -1.15
Scn8a-201ENSMUST00000082209 Pip4p1Q3TWL2 284 aa7.89□□□□□ -1.15
Scn8a-201ENSMUST00000082209 Trav9n-4A0A075B631 113 aa7.89□□□□□ -1.15
Scn8a-201ENSMUST00000082209 Pla2g2aP31482 146 aa7.89□□□□□ -1.15
Scn8a-201ENSMUST00000082209 Map6d1Q14BB9 191 aa7.89□□□□□ -1.15
Scn8a-201ENSMUST00000082209 Rpl39lQ9CQD0 51 aa7.88□□□□□ -1.15
Scn8a-201ENSMUST00000082209 AcacbE9Q4Z2 2448 aa7.88□□□□□ -1.15
Scn8a-201ENSMUST00000082209 Q9D131 166 aa7.88□□□□□ -1.15
Scn8a-201ENSMUST00000082209 Gm10401E9Q3K6 71 aa7.87□□□□□ -1.15
Scn8a-201ENSMUST00000082209 FshbQ60687 130 aa7.87□□□□□ -1.15
Scn8a-201ENSMUST00000082209 Igkv1-88A0A140T8N1 120 aa7.87□□□□□ -1.15
Scn8a-201ENSMUST00000082209 Spry2Q9QXV8 315 aa7.87□□□□□ -1.15
Scn8a-201ENSMUST00000082209 Tnfrsf23Q9ER63 176 aa7.86□□□□□ -1.15
Scn8a-201ENSMUST00000082209 Gm9573F7C950 1606 aa7.86□□□□□ -1.15
Scn8a-201ENSMUST00000082209 Ighv8-12A0A0G2JDE1 119 aa7.86□□□□□ -1.15
Scn8a-201ENSMUST00000082209 Klk12B2RVZ0 247 aa7.86□□□□□ -1.15
Scn8a-201ENSMUST00000082209 Atox1O08997 68 aaKnown RBP7.86□□□□□ -1.15
Scn8a-201ENSMUST00000082209 Psmb8P28063 276 aa7.86□□□□□ -1.15
Scn8a-201ENSMUST00000082209 Znf239P24399 201 aa7.86□□□□□ -1.15
Scn8a-201ENSMUST00000082209 Gm9949Q8C9F4 104 aa7.86□□□□□ -1.15
Scn8a-201ENSMUST00000082209 Ighv1-63A0A075B5X2 117 aa7.86□□□□□ -1.15
Scn8a-201ENSMUST00000082209 Trbv13-1A0A0B4J1P8 112 aa7.86□□□□□ -1.15
Scn8a-201ENSMUST00000082209 E130116L18RikQ8BMV6 101 aa7.86□□□□□ -1.15
Scn8a-201ENSMUST00000082209 B430305J03RikQ8BQQ8 176 aa7.86□□□□□ -1.15
Scn8a-201ENSMUST00000082209 Gm3618D3Z4P5 127 aa7.85□□□□□ -1.15
Scn8a-201ENSMUST00000082209 Ebi3O35228 228 aa7.85□□□□□ -1.15
Scn8a-201ENSMUST00000082209 Trav13d-4A0A0G2JFX3 110 aa7.85□□□□□ -1.15
Scn8a-201ENSMUST00000082209 Cd27P41272 250 aa7.85□□□□□ -1.15
Scn8a-201ENSMUST00000082209 1700056E22RikF7CNM6 234 aa7.85□□□□□ -1.15
Scn8a-201ENSMUST00000082209 CrygdP04342 174 aa7.85□□□□□ -1.15
Scn8a-201ENSMUST00000082209 A830031A19RikQ8BNT5 113 aa7.85□□□□□ -1.15
Scn8a-201ENSMUST00000082209 Igkv2-109A0A075B5K6 120 aa7.85□□□□□ -1.15
Scn8a-201ENSMUST00000082209 Igkv1-35A0A0G2JDE5 120 aa7.85□□□□□ -1.15
Scn8a-201ENSMUST00000082209 E130114P18RikF6S0S7 154 aa7.85□□□□□ -1.15
Scn8a-201ENSMUST00000082209 Plac8l1Q08EJ0 177 aa7.85□□□□□ -1.15
Scn8a-201ENSMUST00000082209 Gm19935A0A1B0GSF9 52 aa7.85□□□□□ -1.15
Scn8a-201ENSMUST00000082209 Trav13n-1A0A0G2JEU8 110 aa7.84□□□□□ -1.15
Scn8a-201ENSMUST00000082209 Igkv3-10A0A0G2JGN0 119 aa7.84□□□□□ -1.15
Scn8a-201ENSMUST00000082209 Ufsp1Q9CZP0 217 aa7.84□□□□□ -1.15
Scn8a-201ENSMUST00000082209 Igkv3-4A0A140T8Q4 119 aa7.84□□□□□ -1.15
Scn8a-201ENSMUST00000082209 CenpwQ3URR0 86 aa7.84□□□□□ -1.15
Scn8a-201ENSMUST00000082209 Serp2Q6TAW2 65 aa7.84□□□□□ -1.15
Scn8a-201ENSMUST00000082209 Gm44965A0A0N4SVR3 59 aa7.84□□□□□ -1.15
Scn8a-201ENSMUST00000082209 Rnf185Q91YT2 192 aa7.83□□□□□ -1.16
Scn8a-201ENSMUST00000082209 Trav13d-1A0A075B606 110 aa7.83□□□□□ -1.16
Scn8a-201ENSMUST00000082209 Wfdc10Q3V2J9 124 aa7.83□□□□□ -1.16
Scn8a-201ENSMUST00000082209 Znf706Q9D115 76 aaKnown RBP7.83□□□□□ -1.16
Scn8a-201ENSMUST00000082209 Higd2aQ9CQJ1 106 aa7.82□□□□□ -1.16
Scn8a-201ENSMUST00000082209 Gm9913Q8BQQ2 135 aa7.82□□□□□ -1.16
Scn8a-201ENSMUST00000082209 Fgf23Q9EPC2 251 aa7.82□□□□□ -1.16
Scn8a-201ENSMUST00000082209 Gm9805F6YK59 57 aa7.82□□□□□ -1.16
Scn8a-201ENSMUST00000082209 Lmo4P61969 165 aa7.82□□□□□ -1.16
Scn8a-201ENSMUST00000082209 Gm10226O88253 85 aa7.82□□□□□ -1.16
Scn8a-201ENSMUST00000082209 Ighv2-9-1A0A075B697 116 aa7.82□□□□□ -1.16
Scn8a-201ENSMUST00000082209 Myo9aQ8C170 2542 aa7.81□□□□□ -1.16
Scn8a-201ENSMUST00000082209 Smim1P0C8K7 78 aa7.81□□□□□ -1.16
Scn8a-201ENSMUST00000082209 Gm10647E9Q8X0 124 aa7.81□□□□□ -1.16
Retrieved 100 of 22,080 RNA–protein pairs in 62.9 ms