RNA–Protein interactions for RNA: ENSMUST00000056508.11

Clcn3-202, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Clcn3, Length 5,684 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-202ENSMUST00000056508 Fer1l6E0CZ42 1862 aa6.15□□□□□ -1.43
Clcn3-202ENSMUST00000056508 Plxnd1Q3UH93 1925 aa6.15□□□□□ -1.43
Clcn3-202ENSMUST00000056508 Arid1aA2BH40 2283 aaKnown RBP6.15□□□□□ -1.43
Clcn3-202ENSMUST00000056508 D730001G18RikA0A087WQU7 115 aa6.15□□□□□ -1.43
Clcn3-202ENSMUST00000056508 P04945 108 aa6.15□□□□□ -1.43
Clcn3-202ENSMUST00000056508 Pate4Q09098 99 aa6.14□□□□□ -1.43
Clcn3-202ENSMUST00000056508 Gm10577Q3UDV9 132 aa6.14□□□□□ -1.43
Clcn3-202ENSMUST00000056508 9230109A22RikQ8BHE6 111 aa6.14□□□□□ -1.43
Clcn3-202ENSMUST00000056508 Fam229bQ8CF36 80 aa6.14□□□□□ -1.43
Clcn3-202ENSMUST00000056508 Nup188Q6ZQH8 1759 aa6.14□□□□□ -1.43
Clcn3-202ENSMUST00000056508 Usmg5Q78IK2 58 aa6.14□□□□□ -1.43
Clcn3-202ENSMUST00000056508 SmcpP15265 143 aa6.14□□□□□ -1.43
Clcn3-202ENSMUST00000056508 Lrrk1Q3UHC2 2014 aa6.14□□□□□ -1.43
Clcn3-202ENSMUST00000056508 Baz2aQ91YE5 1889 aaKnown RBP6.14□□□□□ -1.43
Clcn3-202ENSMUST00000056508 3110018I06RikQ9CXS0 120 aa6.13□□□□□ -1.43
Clcn3-202ENSMUST00000056508 Tnrc6cQ3UHC0 1690 aaKnown RBP6.13□□□□□ -1.43
Clcn3-202ENSMUST00000056508 Dennd4aE9Q8V6 1869 aa6.13□□□□□ -1.43
Clcn3-202ENSMUST00000056508 Pde4dipQ80YT7 2224 aa6.13□□□□□ -1.43
Clcn3-202ENSMUST00000056508 A0A286YCN5 57 aa6.13□□□□□ -1.43
Clcn3-202ENSMUST00000056508 Igkv5-37A0A140T8N4 115 aa6.13□□□□□ -1.43
Clcn3-202ENSMUST00000056508 Sprr3O09116 238 aa6.13□□□□□ -1.43
Clcn3-202ENSMUST00000056508 Clpsl2Q3UW21 102 aa6.13□□□□□ -1.43
Clcn3-202ENSMUST00000056508 Gm17606F6ZL36 78 aa6.12□□□□□ -1.43
Clcn3-202ENSMUST00000056508 Uqcr11Q9CPX8 56 aa6.12□□□□□ -1.43
Clcn3-202ENSMUST00000056508 Gm9513B3GLJ6 99 aa6.12□□□□□ -1.43
Clcn3-202ENSMUST00000056508 Gm20661K7N787 53 aa6.12□□□□□ -1.43
Clcn3-202ENSMUST00000056508 Zgrf1Q0VGT4 1863 aa6.12□□□□□ -1.43
Clcn3-202ENSMUST00000056508 Igkv13-85A0A075B666 115 aa6.12□□□□□ -1.43
Clcn3-202ENSMUST00000056508 Gm7276Q3TYW4 209 aa6.12□□□□□ -1.43
Clcn3-202ENSMUST00000056508 4933415A04RikQ9D443 101 aa6.12□□□□□ -1.43
Clcn3-202ENSMUST00000056508 Rspo1Q9Z132 265 aa6.12□□□□□ -1.43
Clcn3-202ENSMUST00000056508 D430041D05RikF6ZGR6 1678 aa6.12□□□□□ -1.43
Clcn3-202ENSMUST00000056508 Ecm29Q6PDI5 1840 aa6.11□□□□□ -1.43
Clcn3-202ENSMUST00000056508 Igkv3-5A0A140T8M6 119 aa6.11□□□□□ -1.43
Clcn3-202ENSMUST00000056508 Prok1Q14A28 105 aa6.11□□□□□ -1.43
Clcn3-202ENSMUST00000056508 Crybg1A0A0G2JG52 2065 aa6.11□□□□□ -1.43
Clcn3-202ENSMUST00000056508 Igkv8-28A0A0G2JE47 121 aa6.11□□□□□ -1.43
Clcn3-202ENSMUST00000056508 Dock6Q8VDR9 2080 aa6.11□□□□□ -1.43
Clcn3-202ENSMUST00000056508 Akap11E9Q777 1895 aa6.1□□□□□ -1.43
Clcn3-202ENSMUST00000056508 Cacna1sQ02789 1880 aa6.1□□□□□ -1.43
Clcn3-202ENSMUST00000056508 Dock3Q8CIQ7 2027 aa6.1□□□□□ -1.43
Clcn3-202ENSMUST00000056508 Scn11aQ9R053 1765 aa6.1□□□□□ -1.43
Clcn3-202ENSMUST00000056508 Lce6aD3YV94 81 aa6.1□□□□□ -1.43
Clcn3-202ENSMUST00000056508 IappP12968 93 aa6.1□□□□□ -1.43
Clcn3-202ENSMUST00000056508 Coa5Q99M07 74 aa6.1□□□□□ -1.43
Clcn3-202ENSMUST00000056508 4930447F04RikA2AFR2 126 aa6.09□□□□□ -1.43
Clcn3-202ENSMUST00000056508 Smr2O09133 150 aa6.09□□□□□ -1.43
Clcn3-202ENSMUST00000056508 Romo1P60603 79 aa6.09□□□□□ -1.43
Clcn3-202ENSMUST00000056508 Defb46Q4QY34 57 aa6.09□□□□□ -1.43
Clcn3-202ENSMUST00000056508 Arap2Q8BZ05 1703 aa6.09□□□□□ -1.43
Clcn3-202ENSMUST00000056508 Gm20730A0A075B5J6 119 aa6.09□□□□□ -1.43
Clcn3-202ENSMUST00000056508 Defb6Q91VD6 63 aa6.09□□□□□ -1.43
Clcn3-202ENSMUST00000056508 Tfpi2O35536 230 aa6.09□□□□□ -1.44
Clcn3-202ENSMUST00000056508 SptbP15508 2128 aa6.08□□□□□ -1.44
Clcn3-202ENSMUST00000056508 Cd24P24807 76 aa6.08□□□□□ -1.44
Clcn3-202ENSMUST00000056508 Gm6040Q4QY32 63 aa6.08□□□□□ -1.44
Clcn3-202ENSMUST00000056508 PoleQ9WVF7 2283 aa6.08□□□□□ -1.44
Clcn3-202ENSMUST00000056508 TicrrQ8BQ33 1889 aa6.08□□□□□ -1.44
Clcn3-202ENSMUST00000056508 Krtap24-1G3X9A2 248 aa6.08□□□□□ -1.44
Clcn3-202ENSMUST00000056508 Ascc3E9PZJ8 2198 aaKnown RBP6.07□□□□□ -1.44
Clcn3-202ENSMUST00000056508 Anapc1P53995 1944 aaKnown RBP6.07□□□□□ -1.44
Clcn3-202ENSMUST00000056508 Defb13Q8R2I4 64 aa6.07□□□□□ -1.44
Clcn3-202ENSMUST00000056508 4930524J08RikQ9CUJ5 163 aa6.07□□□□□ -1.44
Clcn3-202ENSMUST00000056508 MpdzQ8VBX6 2055 aa6.06□□□□□ -1.44
Clcn3-202ENSMUST00000056508 PikfyveQ9Z1T6 2097 aa6.06□□□□□ -1.44
Clcn3-202ENSMUST00000056508 RictorQ6QI06 1708 aa6.06□□□□□ -1.44
Clcn3-202ENSMUST00000056508 PatjQ63ZW7 1834 aa6.06□□□□□ -1.44
Clcn3-202ENSMUST00000056508 Sipa1l2Q80TE4 1722 aa6.06□□□□□ -1.44
Clcn3-202ENSMUST00000056508 Trpm6Q8CIR4 2028 aa6.05□□□□□ -1.44
Clcn3-202ENSMUST00000056508 Igkv8-34A0A0G2JDU0 121 aa6.05□□□□□ -1.44
Clcn3-202ENSMUST00000056508 A730009L09RikA0A1B0GS82 72 aa6.05□□□□□ -1.44
Clcn3-202ENSMUST00000056508 Arfgef1G3X9K3 1846 aaKnown RBP6.05□□□□□ -1.44
Clcn3-202ENSMUST00000056508 Ckap5A2AGT5 2032 aaKnown RBP6.04□□□□□ -1.44
Clcn3-202ENSMUST00000056508 Dock5B2RY04 1868 aa6.04□□□□□ -1.44
Clcn3-202ENSMUST00000056508 Spink13Q3UTS8 97 aa6.04□□□□□ -1.44
Clcn3-202ENSMUST00000056508 Gm45861A0A1B0GRY3 1923 aa6.04□□□□□ -1.44
Clcn3-202ENSMUST00000056508 Rpl39lQ9CQD0 51 aa6.04□□□□□ -1.44
Clcn3-202ENSMUST00000056508 Defb30Q30KN4 75 aa6.04□□□□□ -1.44
Clcn3-202ENSMUST00000056508 Fstl3Q9EQC7 256 aa6.03□□□□□ -1.44
Clcn3-202ENSMUST00000056508 Gm17677B3GLJ5 116 aa6.03□□□□□ -1.44
Clcn3-202ENSMUST00000056508 ArtnQ9Z0L2 224 aa6.03□□□□□ -1.44
Clcn3-202ENSMUST00000056508 Dock1Q8BUR4 1865 aa6.03□□□□□ -1.44
Clcn3-202ENSMUST00000056508 Odf3l2Q3TZ65 277 aa6.02□□□□□ -1.45
Clcn3-202ENSMUST00000056508 Tdrd6P61407 2134 aa6.02□□□□□ -1.45
Clcn3-202ENSMUST00000056508 Pi4kaE9Q3L2 2105 aa6.02□□□□□ -1.45
Clcn3-202ENSMUST00000056508 Cox6b1P56391 86 aaKnown RBP6.02□□□□□ -1.45
Clcn3-202ENSMUST00000056508 Tnfrsf13bQ9ET35 249 aa6.02□□□□□ -1.45
Clcn3-202ENSMUST00000056508 Lynx1P0DP60 116 aa6.02□□□□□ -1.45
Clcn3-202ENSMUST00000056508 Heatr5bQ8C547 2070 aa6.02□□□□□ -1.45
Clcn3-202ENSMUST00000056508 Zfp142G5E869 1843 aa6.01□□□□□ -1.45
Clcn3-202ENSMUST00000056508 Siglec1Q62230 1695 aa6.01□□□□□ -1.45
Clcn3-202ENSMUST00000056508 KcpQ3U492 1550 aa6.01□□□□□ -1.45
Clcn3-202ENSMUST00000056508 Trpm7Q923J1 1863 aa6.01□□□□□ -1.45
Clcn3-202ENSMUST00000056508 Igkv8-19A0A0G2JFN8 121 aa6.01□□□□□ -1.45
Clcn3-202ENSMUST00000056508 Gm10642Q3TWM1 71 aa6.01□□□□□ -1.45
Clcn3-202ENSMUST00000056508 Wdr81Q5ND34 1934 aa6.01□□□□□ -1.45
Clcn3-202ENSMUST00000056508 Gm17509Q9CZ61 145 aa6.01□□□□□ -1.45
Clcn3-202ENSMUST00000056508 Loxhd1C8YR32 2068 aa6□□□□□ -1.45
Clcn3-202ENSMUST00000056508 Tnp2P11378 117 aa6□□□□□ -1.45
Clcn3-202ENSMUST00000056508 Minos1Q7TNS2 76 aa6□□□□□ -1.45
Retrieved 100 of 22,080 RNA–protein pairs in 94 ms