RNA–Protein interactions for RNA: ENSMUST00000053440.7

Ccdc40-202, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ccdc40, Length 3,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-202ENSMUST00000053440 Ccl24Q9JKC0 119 aa7.15□□□□□ -1.27
Ccdc40-202ENSMUST00000053440 Helz2E9QAM5 2947 aaKnown RBP7.14□□□□□ -1.27
Ccdc40-202ENSMUST00000053440 Fhl2O70433 279 aa7.14□□□□□ -1.27
Ccdc40-202ENSMUST00000053440 P06329 120 aa7.14□□□□□ -1.27
Ccdc40-202ENSMUST00000053440 Rbmy1bQ60990 380 aa7.14□□□□□ -1.27
Ccdc40-202ENSMUST00000053440 Gm4861Q8C5A4 106 aa7.14□□□□□ -1.27
Ccdc40-202ENSMUST00000053440 Lgals4Q8K419 326 aa7.14□□□□□ -1.27
Ccdc40-202ENSMUST00000053440 Ighv5-9-1A0A0A6YVS4 126 aa7.14□□□□□ -1.27
Ccdc40-202ENSMUST00000053440 Atp5g3P56384 141 aa7.14□□□□□ -1.27
Ccdc40-202ENSMUST00000053440 Tep1P97499 2629 aa7.14□□□□□ -1.27
Ccdc40-202ENSMUST00000053440 Dmbt1Q60997 2085 aa7.14□□□□□ -1.27
Ccdc40-202ENSMUST00000053440 Krtap27-1E9PX37 202 aa7.14□□□□□ -1.27
Ccdc40-202ENSMUST00000053440 1700020N15RikL7MTX3 112 aa7.14□□□□□ -1.27
Ccdc40-202ENSMUST00000053440 Samd5Q3V1H9 173 aa7.14□□□□□ -1.27
Ccdc40-202ENSMUST00000053440 GalmQ8K157 342 aa7.14□□□□□ -1.27
Ccdc40-202ENSMUST00000053440 4930470P17RikQ9D542 155 aa7.13□□□□□ -1.27
Ccdc40-202ENSMUST00000053440 Ifitm1Q9D103 106 aa7.13□□□□□ -1.27
Ccdc40-202ENSMUST00000053440 Avpi1Q9D7H4 142 aa7.13□□□□□ -1.27
Ccdc40-202ENSMUST00000053440 Lyrm7Q9DA03 104 aa7.13□□□□□ -1.27
Ccdc40-202ENSMUST00000053440 Gata1P17679 413 aa7.13□□□□□ -1.27
Ccdc40-202ENSMUST00000053440 Trav7-6A0A075B640 112 aa7.12□□□□□ -1.27
Ccdc40-202ENSMUST00000053440 Gm9887F6RFI0 207 aa7.12□□□□□ -1.27
Ccdc40-202ENSMUST00000053440 Ighv1-72P01751 139 aa7.12□□□□□ -1.27
Ccdc40-202ENSMUST00000053440 Srp14P16254 110 aaKnown RBP7.12□□□□□ -1.27
Ccdc40-202ENSMUST00000053440 3110070M22RikQ9DAQ7 118 aa7.12□□□□□ -1.27
Ccdc40-202ENSMUST00000053440 Ighv2-6-8A0A0A6YWY9 116 aa7.12□□□□□ -1.27
Ccdc40-202ENSMUST00000053440 Gm7849D3YX03 116 aa7.12□□□□□ -1.27
Ccdc40-202ENSMUST00000053440 Gm815Q3UWS2 115 aa7.12□□□□□ -1.27
Ccdc40-202ENSMUST00000053440 MtorQ9JLN9 2549 aa7.12□□□□□ -1.27
Ccdc40-202ENSMUST00000053440 Trdv5A0A075B661 115 aa7.11□□□□□ -1.27
Ccdc40-202ENSMUST00000053440 Igkv4-78A0A0A6YYE5 119 aa7.11□□□□□ -1.27
Ccdc40-202ENSMUST00000053440 Gm10509O88255 85 aa7.11□□□□□ -1.27
Ccdc40-202ENSMUST00000053440 Klk1b4P00757 256 aa7.11□□□□□ -1.27
Ccdc40-202ENSMUST00000053440 Ly6gP35461 111 aa7.11□□□□□ -1.27
Ccdc40-202ENSMUST00000053440 Ube2e2Q91W82 201 aa7.11□□□□□ -1.27
Ccdc40-202ENSMUST00000053440 Fgf23Q9EPC2 251 aa7.11□□□□□ -1.27
Ccdc40-202ENSMUST00000053440 Igkv4-68A0A0B4J1I7 117 aa7.11□□□□□ -1.27
Ccdc40-202ENSMUST00000053440 Gm10251J3QPM5 127 aa7.11□□□□□ -1.27
Ccdc40-202ENSMUST00000053440 Hectd1Q69ZR2 2618 aaKnown RBP7.11□□□□□ -1.27
Ccdc40-202ENSMUST00000053440 Gm6793B2RXM2 351 aa7.1□□□□□ -1.27
Ccdc40-202ENSMUST00000053440 Glrp1E9Q9S8 174 aa7.1□□□□□ -1.27
Ccdc40-202ENSMUST00000053440 Gm10542F6XDR3 90 aa7.1□□□□□ -1.27
Ccdc40-202ENSMUST00000053440 Prp2P05143 317 aa7.1□□□□□ -1.27
Ccdc40-202ENSMUST00000053440 Ang3P97802 145 aa7.1□□□□□ -1.27
Ccdc40-202ENSMUST00000053440 Spink1P09036 80 aa7.1□□□□□ -1.27
Ccdc40-202ENSMUST00000053440 Gm9913Q8BQQ2 135 aa7.1□□□□□ -1.27
Ccdc40-202ENSMUST00000053440 Ly86O88188 162 aa7.1□□□□□ -1.27
Ccdc40-202ENSMUST00000053440 P01738 130 aa7.1□□□□□ -1.27
Ccdc40-202ENSMUST00000053440 Gm10767Q3TQP0 103 aa7.1□□□□□ -1.27
Ccdc40-202ENSMUST00000053440 P01786 117 aa7.09□□□□□ -1.27
Ccdc40-202ENSMUST00000053440 Eif4ebp3Q80VV3 101 aa7.09□□□□□ -1.27
Ccdc40-202ENSMUST00000053440 Gm9747Q810H1 104 aa7.09□□□□□ -1.27
Ccdc40-202ENSMUST00000053440 Gm9936Q8C864 160 aa7.09□□□□□ -1.27
Ccdc40-202ENSMUST00000053440 RetnQ99P87 114 aa7.09□□□□□ -1.27
Ccdc40-202ENSMUST00000053440 Trbv30A0A0B4J1P1 111 aa7.09□□□□□ -1.27
Ccdc40-202ENSMUST00000053440 Trav13n-1A0A0G2JEU8 110 aa7.09□□□□□ -1.27
Ccdc40-202ENSMUST00000053440 Kmt2bO08550 2713 aa7.09□□□□□ -1.27
Ccdc40-202ENSMUST00000053440 Ighv1-11A0A0A6YWI9 117 aa7.09□□□□□ -1.28
Ccdc40-202ENSMUST00000053440 Psmb8P28063 276 aa7.09□□□□□ -1.28
Ccdc40-202ENSMUST00000053440 Rnf183Q8QZS5 190 aa7.09□□□□□ -1.28
Ccdc40-202ENSMUST00000053440 Defb18Q30KP5 85 aa7.08□□□□□ -1.28
Ccdc40-202ENSMUST00000053440 Prelid3aQ8VE85 172 aa7.08□□□□□ -1.28
Ccdc40-202ENSMUST00000053440 Ucn2Q99ML8 113 aa7.08□□□□□ -1.28
Ccdc40-202ENSMUST00000053440 Ube2wQ8VDW4 151 aa7.08□□□□□ -1.28
Ccdc40-202ENSMUST00000053440 Smrp1Q2MH31 260 aa7.07□□□□□ -1.28
Ccdc40-202ENSMUST00000053440 Smim10l1A0A087WNQ7 89 aa7.07□□□□□ -1.28
Ccdc40-202ENSMUST00000053440 Fam110dQ80X91 271 aa7.07□□□□□ -1.28
Ccdc40-202ENSMUST00000053440 Tmem101Q91VP7 257 aa7.07□□□□□ -1.28
Ccdc40-202ENSMUST00000053440 Pdzd2E9Q1M1 2796 aa7.07□□□□□ -1.28
Ccdc40-202ENSMUST00000053440 Znf740Q6NZQ6 180 aa7.07□□□□□ -1.28
Ccdc40-202ENSMUST00000053440 H1fxQ80ZM5 188 aa7.07□□□□□ -1.28
Ccdc40-202ENSMUST00000053440 SpinklQ8CEK3 90 aa7.07□□□□□ -1.28
Ccdc40-202ENSMUST00000053440 Prr13Q9CQJ5 137 aa7.07□□□□□ -1.28
Ccdc40-202ENSMUST00000053440 Wdr38Q9D994 303 aa7.07□□□□□ -1.28
Ccdc40-202ENSMUST00000053440 CubnQ9JLB4 3623 aa7.07□□□□□ -1.28
Ccdc40-202ENSMUST00000053440 FlnaQ8BTM8 2647 aaKnown RBP7.06□□□□□ -1.28
Ccdc40-202ENSMUST00000053440 P01823 113 aa7.06□□□□□ -1.28
Ccdc40-202ENSMUST00000053440 CenpwQ3URR0 86 aa7.06□□□□□ -1.28
Ccdc40-202ENSMUST00000053440 Xirp2Q4U4S6 3784 aa7.06□□□□□ -1.28
Ccdc40-202ENSMUST00000053440 Cox17P56394 63 aa7.06□□□□□ -1.28
Ccdc40-202ENSMUST00000053440 Mapk1ip1lQ8BH93 242 aa7.06□□□□□ -1.28
Ccdc40-202ENSMUST00000053440 4930432M17RikQ3V0W9 174 aa7.06□□□□□ -1.28
Ccdc40-202ENSMUST00000053440 Ankrd11E9Q4F7 2643 aa7.05□□□□□ -1.28
Ccdc40-202ENSMUST00000053440 Fgfbp3Q1HCM0 245 aa7.05□□□□□ -1.28
Ccdc40-202ENSMUST00000053440 Nhlrc1Q8BR37 401 aa7.05□□□□□ -1.28
Ccdc40-202ENSMUST00000053440 Gm3443F7CCV5 94 aa7.05□□□□□ -1.28
Ccdc40-202ENSMUST00000053440 Usp24B1AY13 2617 aaKnown RBP7.05□□□□□ -1.28
Ccdc40-202ENSMUST00000053440 Ankrd17Q99NH0 2603 aaKnown RBP7.05□□□□□ -1.28
Ccdc40-202ENSMUST00000053440 P01729 129 aa7.05□□□□□ -1.28
Ccdc40-202ENSMUST00000053440 MrapQ9D159 127 aa7.05□□□□□ -1.28
Ccdc40-202ENSMUST00000053440 Ly6hQ9WUC3 139 aa7.05□□□□□ -1.28
Ccdc40-202ENSMUST00000053440 Myo18bE9PV66 2605 aa7.04□□□□□ -1.28
Ccdc40-202ENSMUST00000053440 Igkv4-79A0A075B5L8 119 aa7.04□□□□□ -1.28
Ccdc40-202ENSMUST00000053440 March3Q8BRX9 218 aa7.04□□□□□ -1.28
Ccdc40-202ENSMUST00000053440 Shisa2Q8QZV2 295 aa7.04□□□□□ -1.28
Ccdc40-202ENSMUST00000053440 Cox6cQ9CPQ1 76 aa7.04□□□□□ -1.28
Ccdc40-202ENSMUST00000053440 PrlhG3UWC3 86 aa7.04□□□□□ -1.28
Ccdc40-202ENSMUST00000053440 Atp5g1Q9CR84 136 aa7.04□□□□□ -1.28
Ccdc40-202ENSMUST00000053440 Phpt1Q9DAK9 124 aa7.04□□□□□ -1.28
Ccdc40-202ENSMUST00000053440 Spink10Q8CAC8 162 aa7.04□□□□□ -1.28
Retrieved 100 of 22,080 RNA–protein pairs in 40.4 ms