RNA–Protein interactions for RNA: ENSMUST00000041639.6

Syne1-201, Transcript of Nesprin-1, mousemouse

TSL 1 (best) BASIC

Gene Syne1, Length 6,990 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Syne1-201ENSMUST00000041639 Smim20D3Z7Q2 69 aa7.45□□□□□ -1.22
Syne1-201ENSMUST00000041639 PpdpfQ9CR37 115 aa7.45□□□□□ -1.22
Syne1-201ENSMUST00000041639 Ighv8-12A0A0G2JDE1 119 aa7.45□□□□□ -1.22
Syne1-201ENSMUST00000041639 Rnase1P00683 149 aa7.45□□□□□ -1.22
Syne1-201ENSMUST00000041639 Ttc28Q80XJ3 2450 aa7.45□□□□□ -1.22
Syne1-201ENSMUST00000041639 1110002E22RikE0CYV9 1786 aa7.45□□□□□ -1.22
Syne1-201ENSMUST00000041639 P01820 115 aa7.45□□□□□ -1.22
Syne1-201ENSMUST00000041639 Acyp1P56376 99 aa7.45□□□□□ -1.22
Syne1-201ENSMUST00000041639 9430069I07RikQ9CX21 111 aa7.45□□□□□ -1.22
Syne1-201ENSMUST00000041639 Cryba4Q9JJV0 196 aa7.44□□□□□ -1.22
Syne1-201ENSMUST00000041639 Gm5878E9PUB3 99 aa7.44□□□□□ -1.22
Syne1-201ENSMUST00000041639 Fam222aQ6PGH4 453 aa7.44□□□□□ -1.22
Syne1-201ENSMUST00000041639 Notch2O35516 2470 aa7.44□□□□□ -1.22
Syne1-201ENSMUST00000041639 Ormdl1Q921I0 153 aa7.44□□□□□ -1.22
Syne1-201ENSMUST00000041639 1700012A03RikQ9DAF1 130 aa7.44□□□□□ -1.22
Syne1-201ENSMUST00000041639 Piezo2Q8CD54 2822 aa7.43□□□□□ -1.22
Syne1-201ENSMUST00000041639 P18527 97 aa7.43□□□□□ -1.22
Syne1-201ENSMUST00000041639 B9d2Q3UK10 175 aa7.43□□□□□ -1.22
Syne1-201ENSMUST00000041639 Sptbn4E9PX29 2561 aa7.43□□□□□ -1.22
Syne1-201ENSMUST00000041639 Trav9n-4A0A075B631 113 aa7.43□□□□□ -1.22
Syne1-201ENSMUST00000041639 Rpl18aP62717 176 aaKnown RBP7.43□□□□□ -1.22
Syne1-201ENSMUST00000041639 Q9CX25 107 aa7.43□□□□□ -1.22
Syne1-201ENSMUST00000041639 Igkv3-10A0A0G2JGN0 119 aa7.43□□□□□ -1.22
Syne1-201ENSMUST00000041639 Igf1P05017 153 aa7.43□□□□□ -1.22
Syne1-201ENSMUST00000041639 Gm14137Q8CE97 175 aa7.43□□□□□ -1.22
Syne1-201ENSMUST00000041639 Tmem223Q9CQE2 199 aaKnown RBP7.43□□□□□ -1.22
Syne1-201ENSMUST00000041639 Rpl39lQ9CQD0 51 aa7.43□□□□□ -1.22
Syne1-201ENSMUST00000041639 Q9DAQ5 155 aa7.43□□□□□ -1.22
Syne1-201ENSMUST00000041639 Gm37389A0A0A6YW05 95 aa7.43□□□□□ -1.22
Syne1-201ENSMUST00000041639 Tmem254aP0DN89 123 aa7.43□□□□□ -1.22
Syne1-201ENSMUST00000041639 Tmem254bP0DN90 123 aa7.43□□□□□ -1.22
Syne1-201ENSMUST00000041639 Tmem254cP0DN91 123 aa7.43□□□□□ -1.22
Syne1-201ENSMUST00000041639 Igkv3-5A0A140T8M6 119 aa7.42□□□□□ -1.22
Syne1-201ENSMUST00000041639 Sprr3O09116 238 aa7.42□□□□□ -1.22
Syne1-201ENSMUST00000041639 Znf239P24399 201 aa7.42□□□□□ -1.22
Syne1-201ENSMUST00000041639 Adamts20P59511 1906 aa7.42□□□□□ -1.22
Syne1-201ENSMUST00000041639 Ighv1-82A0A0G2JEU7 117 aa7.41□□□□□ -1.22
Syne1-201ENSMUST00000041639 Gm10735Q3US96 136 aa7.41□□□□□ -1.22
Syne1-201ENSMUST00000041639 CrygcQ61597 174 aa7.41□□□□□ -1.22
Syne1-201ENSMUST00000041639 Odf3Q920N1 254 aa7.41□□□□□ -1.22
Syne1-201ENSMUST00000041639 Lmo4P61969 165 aa7.41□□□□□ -1.22
Syne1-201ENSMUST00000041639 Ube2aQ9Z255 152 aa7.41□□□□□ -1.22
Syne1-201ENSMUST00000041639 Atp5eP56382 52 aa7.41□□□□□ -1.22
Syne1-201ENSMUST00000041639 9530003J23RikQ8BM26 151 aa7.41□□□□□ -1.22
Syne1-201ENSMUST00000041639 Wisp2Q9Z0G4 251 aa7.41□□□□□ -1.22
Syne1-201ENSMUST00000041639 Ighv1-85A0A075B5Y6 117 aa7.4□□□□□ -1.22
Syne1-201ENSMUST00000041639 Gm5629P06327 117 aa7.4□□□□□ -1.22
Syne1-201ENSMUST00000041639 Ufsp1Q9CZP0 217 aa7.4□□□□□ -1.22
Syne1-201ENSMUST00000041639 Fxyd5P97808 178 aa7.4□□□□□ -1.22
Syne1-201ENSMUST00000041639 Ypel4Q65Z93 127 aa7.4□□□□□ -1.22
Syne1-201ENSMUST00000041639 E130116L18RikQ8BMV6 101 aa7.4□□□□□ -1.22
Syne1-201ENSMUST00000041639 FcorP0DJI6 106 aa7.4□□□□□ -1.23
Syne1-201ENSMUST00000041639 Naa38Q9D2U5 125 aa7.39□□□□□ -1.23
Syne1-201ENSMUST00000041639 Tln1P26039 2541 aaKnown RBP7.39□□□□□ -1.23
Syne1-201ENSMUST00000041639 Ighv1-75A0A075B5Y2 117 aa7.39□□□□□ -1.23
Syne1-201ENSMUST00000041639 2010109I03RikQ9CQ11 111 aa7.39□□□□□ -1.23
Syne1-201ENSMUST00000041639 Vpreb3D3Z6J4 130 aa7.38□□□□□ -1.23
Syne1-201ENSMUST00000041639 Pip4p1Q3TWL2 284 aa7.38□□□□□ -1.23
Syne1-201ENSMUST00000041639 Gphb5Q812B2 130 aa7.38□□□□□ -1.23
Syne1-201ENSMUST00000041639 Rnf185Q91YT2 192 aa7.37□□□□□ -1.23
Syne1-201ENSMUST00000041639 Tcte2E9PY37 120 aa7.37□□□□□ -1.23
Syne1-201ENSMUST00000041639 Ighv2-3A0A075B696 115 aa7.37□□□□□ -1.23
Syne1-201ENSMUST00000041639 Wipf1Q8K1I7 493 aa7.37□□□□□ -1.23
Syne1-201ENSMUST00000041639 SvipQ3UZP4 77 aa7.37□□□□□ -1.23
Syne1-201ENSMUST00000041639 Tfpi2O35536 230 aa7.37□□□□□ -1.23
Syne1-201ENSMUST00000041639 Gm12689Q8BQU9 117 aa7.37□□□□□ -1.23
Syne1-201ENSMUST00000041639 Q9D8Q6 235 aa7.37□□□□□ -1.23
Syne1-201ENSMUST00000041639 Ly6hQ9WUC3 139 aa7.37□□□□□ -1.23
Syne1-201ENSMUST00000041639 1520401A03RikA0A0J9YVH6 598 aa7.36□□□□□ -1.23
Syne1-201ENSMUST00000041639 Vpreb2P13373 142 aa7.36□□□□□ -1.23
Syne1-201ENSMUST00000041639 Esm1Q9QYY7 184 aa7.36□□□□□ -1.23
Syne1-201ENSMUST00000041639 Gm12353A2AGJ4 60 aa7.36□□□□□ -1.23
Syne1-201ENSMUST00000041639 C1qcQ02105 246 aa7.36□□□□□ -1.23
Syne1-201ENSMUST00000041639 Gm17521F6QAC8 156 aa7.35□□□□□ -1.23
Syne1-201ENSMUST00000041639 Edn2P22389 175 aa7.35□□□□□ -1.23
Syne1-201ENSMUST00000041639 Ighv8-5A0A0A6YY60 119 aa7.35□□□□□ -1.23
Syne1-201ENSMUST00000041639 Lce6aD3YV94 81 aa7.35□□□□□ -1.23
Syne1-201ENSMUST00000041639 Pde6gP09174 87 aa7.35□□□□□ -1.23
Syne1-201ENSMUST00000041639 TshbP12656 138 aa7.35□□□□□ -1.23
Syne1-201ENSMUST00000041639 Eif4ebp1Q60876 117 aa7.35□□□□□ -1.23
Syne1-201ENSMUST00000041639 Pla2g2dQ9WVF6 144 aa7.35□□□□□ -1.23
Syne1-201ENSMUST00000041639 Cfc1P97766 202 aa7.34□□□□□ -1.23
Syne1-201ENSMUST00000041639 Lrrk2Q5S006 2527 aa7.34□□□□□ -1.23
Syne1-201ENSMUST00000041639 CtrlQ9ER05 264 aa7.34□□□□□ -1.23
Syne1-201ENSMUST00000041639 Gm10401E9Q3K6 71 aa7.34□□□□□ -1.23
Syne1-201ENSMUST00000041639 Gm1968Q3T9I3 115 aa7.34□□□□□ -1.23
Syne1-201ENSMUST00000041639 Igkv4-92A0A0B4J1I2 117 aa7.34□□□□□ -1.23
Syne1-201ENSMUST00000041639 PolqQ8CGS6 2544 aa7.34□□□□□ -1.23
Syne1-201ENSMUST00000041639 Fam19a1Q7TPG8 133 aa7.34□□□□□ -1.24
Syne1-201ENSMUST00000041639 Gm16223Q8CBM3 117 aa7.34□□□□□ -1.24
Syne1-201ENSMUST00000041639 Prr15lQ8JZM2 100 aa7.34□□□□□ -1.24
Syne1-201ENSMUST00000041639 A130051J06RikQ8CAU1 227 aa7.33□□□□□ -1.24
Syne1-201ENSMUST00000041639 Piezo1E2JF22 2547 aa7.33□□□□□ -1.24
Syne1-201ENSMUST00000041639 P01729 129 aa7.33□□□□□ -1.24
Syne1-201ENSMUST00000041639 Klk9Q32M27 251 aa7.33□□□□□ -1.24
Syne1-201ENSMUST00000041639 4930535I16RikQ9CUI2 172 aa7.33□□□□□ -1.24
Syne1-201ENSMUST00000041639 BtcQ05928 177 aa7.33□□□□□ -1.24
Syne1-201ENSMUST00000041639 Wdr38Q9D994 303 aa7.33□□□□□ -1.24
Syne1-201ENSMUST00000041639 PtprbB2RU80 1998 aa7.33□□□□□ -1.24
Syne1-201ENSMUST00000041639 Gm28539A0A087WSL9 92 aa7.33□□□□□ -1.24
Retrieved 100 of 22,080 RNA–protein pairs in 75.7 ms