RNA–Protein interactions for RNA: ENSMUST00000034713.8

Ldlr-201, Transcript of Low-density lipoprotein receptor, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ldlr, Length 4,627 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldlr-201ENSMUST00000034713 Ighv8-5A0A0A6YY60 119 aa7.52□□□□□ -1.21
Ldlr-201ENSMUST00000034713 Pla2g2dQ9WVF6 144 aa7.52□□□□□ -1.21
Ldlr-201ENSMUST00000034713 Ighv8-12A0A0G2JDE1 119 aa7.52□□□□□ -1.21
Ldlr-201ENSMUST00000034713 P06328 117 aa7.52□□□□□ -1.21
Ldlr-201ENSMUST00000034713 Trav9-2A0A075B647 113 aa7.51□□□□□ -1.21
Ldlr-201ENSMUST00000034713 Trav9-4A0A0B4J1K2 113 aa7.51□□□□□ -1.21
Ldlr-201ENSMUST00000034713 Gm5629P06327 117 aa7.51□□□□□ -1.21
Ldlr-201ENSMUST00000034713 AngP21570 145 aa7.51□□□□□ -1.21
Ldlr-201ENSMUST00000034713 BtcQ05928 177 aa7.51□□□□□ -1.21
Ldlr-201ENSMUST00000034713 E130218I03RikA0A0U1RNU5 63 aa7.51□□□□□ -1.21
Ldlr-201ENSMUST00000034713 Ighv1-61P01749 117 aa7.51□□□□□ -1.21
Ldlr-201ENSMUST00000034713 Dad1P61804 113 aa7.51□□□□□ -1.21
Ldlr-201ENSMUST00000034713 Gm10553J3QPF1 123 aa7.51□□□□□ -1.21
Ldlr-201ENSMUST00000034713 Tmem258P61166 79 aa7.51□□□□□ -1.21
Ldlr-201ENSMUST00000034713 A130051J06RikQ8CAU1 227 aa7.51□□□□□ -1.21
Ldlr-201ENSMUST00000034713 Trav14d-3-dv8A0A075B619 120 aa7.5□□□□□ -1.21
Ldlr-201ENSMUST00000034713 Wipf1Q8K1I7 493 aa7.5□□□□□ -1.21
Ldlr-201ENSMUST00000034713 Leap2Q91V13 76 aa7.5□□□□□ -1.21
Ldlr-201ENSMUST00000034713 AcanQ61282 2132 aaKnown RBP7.5□□□□□ -1.21
Ldlr-201ENSMUST00000034713 Ighv1-85A0A075B5Y6 117 aa7.5□□□□□ -1.21
Ldlr-201ENSMUST00000034713 Cd99Q8VCN6 175 aa7.5□□□□□ -1.21
Ldlr-201ENSMUST00000034713 Rnf114Q9ET26 229 aa7.5□□□□□ -1.21
Ldlr-201ENSMUST00000034713 Timm17bQ9Z0V7 172 aa7.5□□□□□ -1.21
Ldlr-201ENSMUST00000034713 Igkv4-57A0A0A6YYE7 117 aa7.5□□□□□ -1.21
Ldlr-201ENSMUST00000034713 MplkipQ9D011 178 aa7.5□□□□□ -1.21
Ldlr-201ENSMUST00000034713 Trav9n-2A0A0G2JDP3 113 aa7.5□□□□□ -1.21
Ldlr-201ENSMUST00000034713 Igkv4-61A0A0G2JH00 117 aa7.5□□□□□ -1.21
Ldlr-201ENSMUST00000034713 Gm20726G3UX18 150 aa7.5□□□□□ -1.21
Ldlr-201ENSMUST00000034713 OdaphJ3QNT8 126 aa7.49□□□□□ -1.21
Ldlr-201ENSMUST00000034713 PtprbB2RU80 1998 aa7.49□□□□□ -1.21
Ldlr-201ENSMUST00000034713 Igkv4-74A0A0B4J1I3 119 aa7.49□□□□□ -1.21
Ldlr-201ENSMUST00000034713 Tmem254aP0DN89 123 aa7.49□□□□□ -1.21
Ldlr-201ENSMUST00000034713 Tmem254bP0DN90 123 aa7.49□□□□□ -1.21
Ldlr-201ENSMUST00000034713 Tmem254cP0DN91 123 aa7.49□□□□□ -1.21
Ldlr-201ENSMUST00000034713 Gata3P23772 443 aa7.49□□□□□ -1.21
Ldlr-201ENSMUST00000034713 Wisp2Q9Z0G4 251 aa7.49□□□□□ -1.21
Ldlr-201ENSMUST00000034713 Ighv2-7A0A075B5Q8 116 aa7.48□□□□□ -1.21
Ldlr-201ENSMUST00000034713 Nop10Q9CQS2 64 aa7.48□□□□□ -1.21
Ldlr-201ENSMUST00000034713 Ndufs7Q9DC70 224 aa7.48□□□□□ -1.21
Ldlr-201ENSMUST00000034713 Pla2g2eQ9QUL3 142 aa7.48□□□□□ -1.21
Ldlr-201ENSMUST00000034713 Ighv2-6-8A0A0A6YWY9 116 aa7.48□□□□□ -1.21
Ldlr-201ENSMUST00000034713 Igkv4-59A0A0B4J1I8 117 aa7.48□□□□□ -1.21
Ldlr-201ENSMUST00000034713 Sprr3O09116 238 aa7.48□□□□□ -1.21
Ldlr-201ENSMUST00000034713 Smim1P0C8K7 78 aa7.48□□□□□ -1.21
Ldlr-201ENSMUST00000034713 Pde6gP09174 87 aa7.48□□□□□ -1.21
Ldlr-201ENSMUST00000034713 Tmem223Q9CQE2 199 aaKnown RBP7.47□□□□□ -1.21
Ldlr-201ENSMUST00000034713 Ebi3O35228 228 aa7.47□□□□□ -1.21
Ldlr-201ENSMUST00000034713 P18527 97 aa7.47□□□□□ -1.21
Ldlr-201ENSMUST00000034713 Kiaa1549Q68FD9 1940 aa7.47□□□□□ -1.21
Ldlr-201ENSMUST00000034713 Tcte2E9PY37 120 aa7.47□□□□□ -1.21
Ldlr-201ENSMUST00000034713 Defb2P82020 71 aa7.47□□□□□ -1.21
Ldlr-201ENSMUST00000034713 Fgfbp3Q1HCM0 245 aa7.47□□□□□ -1.21
Ldlr-201ENSMUST00000034713 1810032O08RikE9PZV8 113 aa7.46□□□□□ -1.22
Ldlr-201ENSMUST00000034713 Fhl1P97447 280 aaKnown RBP7.46□□□□□ -1.22
Ldlr-201ENSMUST00000034713 Smr3aQ61900 147 aa7.46□□□□□ -1.22
Ldlr-201ENSMUST00000034713 Q9DAQ5 155 aa7.46□□□□□ -1.22
Ldlr-201ENSMUST00000034713 Rev3lQ61493 3122 aa7.46□□□□□ -1.22
Ldlr-201ENSMUST00000034713 Trav9d-3A0A075B695 113 aa7.46□□□□□ -1.22
Ldlr-201ENSMUST00000034713 Igkv4-54A0A0G2JES9 117 aa7.46□□□□□ -1.22
Ldlr-201ENSMUST00000034713 Ovol3D3YYM0 189 aa7.46□□□□□ -1.22
Ldlr-201ENSMUST00000034713 Rbm3O89086 153 aaKnown RBP7.46□□□□□ -1.22
Ldlr-201ENSMUST00000034713 Ormdl1Q921I0 153 aa7.46□□□□□ -1.22
Ldlr-201ENSMUST00000034713 Bod1lE9Q6J5 3032 aa7.46□□□□□ -1.22
Ldlr-201ENSMUST00000034713 Ang3P97802 145 aa7.45□□□□□ -1.22
Ldlr-201ENSMUST00000034713 Q9D8Q6 235 aa7.45□□□□□ -1.22
Ldlr-201ENSMUST00000034713 Ighv1-66A0A075B5X5 117 aa7.45□□□□□ -1.22
Ldlr-201ENSMUST00000034713 Igkv8-34A0A0G2JDU0 121 aa7.45□□□□□ -1.22
Ldlr-201ENSMUST00000034713 P01820 115 aa7.45□□□□□ -1.22
Ldlr-201ENSMUST00000034713 Ranbp2Q9ERU9 3053 aaKnown RBP7.45□□□□□ -1.22
Ldlr-201ENSMUST00000034713 Igkv3-2A0A075B5P0 119 aa7.45□□□□□ -1.22
Ldlr-201ENSMUST00000034713 Ighv3-3A0A0A6YWL2 116 aa7.45□□□□□ -1.22
Ldlr-201ENSMUST00000034713 Szt2A2A9C3 3431 aa7.45□□□□□ -1.22
Ldlr-201ENSMUST00000034713 Igkv4-72A0A0B4J1I4 117 aa7.45□□□□□ -1.22
Ldlr-201ENSMUST00000034713 FcorP0DJI6 106 aa7.45□□□□□ -1.22
Ldlr-201ENSMUST00000034713 Trav13n-1A0A0G2JEU8 110 aa7.44□□□□□ -1.22
Ldlr-201ENSMUST00000034713 Crlf1Q9JM58 425 aa7.44□□□□□ -1.22
Ldlr-201ENSMUST00000034713 Gm12057A0A087WR21 115 aa7.44□□□□□ -1.22
Ldlr-201ENSMUST00000034713 Rnase1P00683 149 aa7.44□□□□□ -1.22
Ldlr-201ENSMUST00000034713 Tcl1b3P56842 122 aa7.44□□□□□ -1.22
Ldlr-201ENSMUST00000034713 Ndufc1Q9CQY9 76 aa7.43□□□□□ -1.22
Ldlr-201ENSMUST00000034713 Trav13d-1A0A075B606 110 aa7.43□□□□□ -1.22
Ldlr-201ENSMUST00000034713 Gphb5Q812B2 130 aa7.43□□□□□ -1.22
Ldlr-201ENSMUST00000034713 Brk1Q91VR8 75 aa7.43□□□□□ -1.22
Ldlr-201ENSMUST00000034713 PolqQ8CGS6 2544 aa7.43□□□□□ -1.22
Ldlr-201ENSMUST00000034713 Igf1P05017 153 aa7.43□□□□□ -1.22
Ldlr-201ENSMUST00000034713 Zfp462B1AWL2 2495 aaKnown RBP7.43□□□□□ -1.22
Ldlr-201ENSMUST00000034713 Polr2kQ63871 58 aa7.43□□□□□ -1.22
Ldlr-201ENSMUST00000034713 Igkv4-69A0A0B4J1I6 116 aa7.42□□□□□ -1.22
Ldlr-201ENSMUST00000034713 Gm4861Q8C5A4 106 aa7.42□□□□□ -1.22
Ldlr-201ENSMUST00000034713 P01747 120 aa7.41□□□□□ -1.22
Ldlr-201ENSMUST00000034713 TshbP12656 138 aa7.41□□□□□ -1.22
Ldlr-201ENSMUST00000034713 Unc79Q0KK59 2596 aa7.41□□□□□ -1.22
Ldlr-201ENSMUST00000034713 Wdr38Q9D994 303 aa7.41□□□□□ -1.22
Ldlr-201ENSMUST00000034713 Igkv4-79A0A075B5L8 119 aa7.41□□□□□ -1.22
Ldlr-201ENSMUST00000034713 Pou2af1Q64693 256 aa7.41□□□□□ -1.22
Ldlr-201ENSMUST00000034713 Fam222aQ6PGH4 453 aa7.41□□□□□ -1.22
Ldlr-201ENSMUST00000034713 Cox7a1P56392 80 aa7.4□□□□□ -1.22
Ldlr-201ENSMUST00000034713 Arhgap32Q811P8 2089 aa7.4□□□□□ -1.22
Ldlr-201ENSMUST00000034713 Gm10226O88253 85 aa7.4□□□□□ -1.22
Ldlr-201ENSMUST00000034713 Myo15bI7HPW8 3033 aa7.4□□□□□ -1.22
Retrieved 100 of 22,080 RNA–protein pairs in 77.3 ms