RNA–Protein interactions for RNA: ENSMUST00000033158.5

Ubfd1-201, Transcript of Ubiquitin domain-containing protein UBFD1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubfd1, Length 4,849 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1-201ENSMUST00000033158 Gm10251J3QPM5 127 aa12.5□□□□□ -0.41
Ubfd1-201ENSMUST00000033158 AngP21570 145 aa12.5□□□□□ -0.41
Ubfd1-201ENSMUST00000033158 Gm2916Q9D9B9 127 aa12.5□□□□□ -0.41
Ubfd1-201ENSMUST00000033158 Fgf6P21658 208 aa12.49□□□□□ -0.41
Ubfd1-201ENSMUST00000033158 B230359F08RikA0A0B4J1K3 109 aa12.49□□□□□ -0.41
Ubfd1-201ENSMUST00000033158 Gm44965A0A0N4SVR3 59 aa12.49□□□□□ -0.41
Ubfd1-201ENSMUST00000033158 Trav13n-2A0A0G2JF93 110 aa12.48□□□□□ -0.41
Ubfd1-201ENSMUST00000033158 Trav11A0A0B4J1J9 114 aa12.48□□□□□ -0.41
Ubfd1-201ENSMUST00000033158 Ypel4Q65Z93 127 aa12.48□□□□□ -0.41
Ubfd1-201ENSMUST00000033158 Triap1Q9D8Z2 76 aa12.48□□□□□ -0.41
Ubfd1-201ENSMUST00000033158 Ighv1-85A0A075B5Y6 117 aa12.48□□□□□ -0.41
Ubfd1-201ENSMUST00000033158 Eif4ebp1Q60876 117 aa12.48□□□□□ -0.41
Ubfd1-201ENSMUST00000033158 A130051J06RikQ8CAU1 227 aa12.48□□□□□ -0.41
Ubfd1-201ENSMUST00000033158 Klk12B2RVZ0 247 aa12.47□□□□□ -0.41
Ubfd1-201ENSMUST00000033158 Gm12689Q8BQU9 117 aa12.46□□□□□ -0.41
Ubfd1-201ENSMUST00000033158 Gm20726G3UX18 150 aa12.46□□□□□ -0.41
Ubfd1-201ENSMUST00000033158 Rbm3O89086 153 aaKnown RBP12.46□□□□□ -0.41
Ubfd1-201ENSMUST00000033158 Lypd6Q8BPP5 171 aa12.46□□□□□ -0.41
Ubfd1-201ENSMUST00000033158 Igkv2-109A0A075B5K6 120 aa12.46□□□□□ -0.42
Ubfd1-201ENSMUST00000033158 Gm10226O88253 85 aa12.46□□□□□ -0.42
Ubfd1-201ENSMUST00000033158 Sh2d1aO88890 126 aa12.46□□□□□ -0.42
Ubfd1-201ENSMUST00000033158 Gm5629P06327 117 aa12.45□□□□□ -0.42
Ubfd1-201ENSMUST00000033158 B9d2Q3UK10 175 aa12.45□□□□□ -0.42
Ubfd1-201ENSMUST00000033158 Flg2Q2VIS4 2362 aa12.44□□□□□ -0.42
Ubfd1-201ENSMUST00000033158 Igkv1-35A0A0G2JDE5 120 aa12.44□□□□□ -0.42
Ubfd1-201ENSMUST00000033158 BC107364E9Q5A2 140 aa12.44□□□□□ -0.42
Ubfd1-201ENSMUST00000033158 Edn2P22389 175 aa12.44□□□□□ -0.42
Ubfd1-201ENSMUST00000033158 Trav9n-4A0A075B631 113 aa12.44□□□□□ -0.42
Ubfd1-201ENSMUST00000033158 Ebi3O35228 228 aa12.44□□□□□ -0.42
Ubfd1-201ENSMUST00000033158 1700012A03RikQ9DAF1 130 aa12.44□□□□□ -0.42
Ubfd1-201ENSMUST00000033158 Gm10735Q3US96 136 aa12.44□□□□□ -0.42
Ubfd1-201ENSMUST00000033158 PpdpfQ9CR37 115 aa12.44□□□□□ -0.42
Ubfd1-201ENSMUST00000033158 Myo9aQ8C170 2542 aa12.43□□□□□ -0.42
Ubfd1-201ENSMUST00000033158 FcorP0DJI6 106 aa12.43□□□□□ -0.42
Ubfd1-201ENSMUST00000033158 Gata1P17679 413 aa12.43□□□□□ -0.42
Ubfd1-201ENSMUST00000033158 Gm17577J3QNF7 156 aa12.43□□□□□ -0.42
Ubfd1-201ENSMUST00000033158 Ptpn13Q64512 2453 aa12.43□□□□□ -0.42
Ubfd1-201ENSMUST00000033158 Q9D8Q6 235 aa12.42□□□□□ -0.42
Ubfd1-201ENSMUST00000033158 Igkv8-18A0A0B4J1J3 123 aa12.41□□□□□ -0.42
Ubfd1-201ENSMUST00000033158 Psmb8P28063 276 aa12.41□□□□□ -0.42
Ubfd1-201ENSMUST00000033158 Rnf185Q91YT2 192 aa12.41□□□□□ -0.42
Ubfd1-201ENSMUST00000033158 Ankhd1E9PUR0 2548 aaKnown RBP12.41□□□□□ -0.42
Ubfd1-201ENSMUST00000033158 P18527 97 aa12.41□□□□□ -0.42
Ubfd1-201ENSMUST00000033158 1110002E22RikE0CYV9 1786 aa12.4□□□□□ -0.42
Ubfd1-201ENSMUST00000033158 Tanc2A2A690 1994 aa12.4□□□□□ -0.42
Ubfd1-201ENSMUST00000033158 Ormdl1Q921I0 153 aa12.39□□□□□ -0.43
Ubfd1-201ENSMUST00000033158 Usp9xP70398 2559 aaKnown RBP12.39□□□□□ -0.43
Ubfd1-201ENSMUST00000033158 Fgfbp3Q1HCM0 245 aa12.39□□□□□ -0.43
Ubfd1-201ENSMUST00000033158 Tmem258P61166 79 aa12.39□□□□□ -0.43
Ubfd1-201ENSMUST00000033158 C1qcQ02105 246 aa12.39□□□□□ -0.43
Ubfd1-201ENSMUST00000033158 1520401A03RikA0A0J9YVH6 598 aa12.39□□□□□ -0.43
Ubfd1-201ENSMUST00000033158 Ufsp1Q9CZP0 217 aa12.39□□□□□ -0.43
Ubfd1-201ENSMUST00000033158 Ly6c2P0CW03 131 aa12.37□□□□□ -0.43
Ubfd1-201ENSMUST00000033158 CrygdP04342 174 aa12.37□□□□□ -0.43
Ubfd1-201ENSMUST00000033158 Spry2Q9QXV8 315 aa12.37□□□□□ -0.43
Ubfd1-201ENSMUST00000033158 Gm37389A0A0A6YW05 95 aa12.37□□□□□ -0.43
Ubfd1-201ENSMUST00000033158 Gm12353A2AGJ4 60 aa12.37□□□□□ -0.43
Ubfd1-201ENSMUST00000033158 P01729 129 aa12.37□□□□□ -0.43
Ubfd1-201ENSMUST00000033158 Znf575Q3TXZ1 239 aa12.37□□□□□ -0.43
Ubfd1-201ENSMUST00000033158 PlaurP35456 327 aa12.36□□□□□ -0.43
Ubfd1-201ENSMUST00000033158 Rpl18aP62717 176 aaKnown RBP12.36□□□□□ -0.43
Ubfd1-201ENSMUST00000033158 Ighv1-63A0A075B5X2 117 aa12.36□□□□□ -0.43
Ubfd1-201ENSMUST00000033158 TshbP12656 138 aa12.36□□□□□ -0.43
Ubfd1-201ENSMUST00000033158 Ly6gP35461 111 aa12.36□□□□□ -0.43
Ubfd1-201ENSMUST00000033158 Ube2aQ9Z255 152 aa12.36□□□□□ -0.43
Ubfd1-201ENSMUST00000033158 Pde6gP09174 87 aa12.35□□□□□ -0.43
Ubfd1-201ENSMUST00000033158 Tmem254aP0DN89 123 aa12.35□□□□□ -0.43
Ubfd1-201ENSMUST00000033158 Tmem254bP0DN90 123 aa12.35□□□□□ -0.43
Ubfd1-201ENSMUST00000033158 Tmem254cP0DN91 123 aa12.35□□□□□ -0.43
Ubfd1-201ENSMUST00000033158 Gm3618D3Z4P5 127 aa12.35□□□□□ -0.43
Ubfd1-201ENSMUST00000033158 Igkv3-10A0A0G2JGN0 119 aa12.34□□□□□ -0.43
Ubfd1-201ENSMUST00000033158 Igkv3-5A0A140T8M6 119 aa12.34□□□□□ -0.43
Ubfd1-201ENSMUST00000033158 Fhl2O70433 279 aa12.34□□□□□ -0.43
Ubfd1-201ENSMUST00000033158 Atp5eP56382 52 aa12.34□□□□□ -0.43
Ubfd1-201ENSMUST00000033158 Rpl39lQ9CQD0 51 aa12.34□□□□□ -0.43
Ubfd1-201ENSMUST00000033158 Ovol3D3YYM0 189 aa12.33□□□□□ -0.44
Ubfd1-201ENSMUST00000033158 Nav3Q80TN7 2359 aa12.33□□□□□ -0.44
Ubfd1-201ENSMUST00000033158 Ighv1-61P01749 117 aa12.33□□□□□ -0.44
Ubfd1-201ENSMUST00000033158 Wipf1Q8K1I7 493 aa12.33□□□□□ -0.44
Ubfd1-201ENSMUST00000033158 Ighv1-66A0A075B5X5 117 aa12.33□□□□□ -0.44
Ubfd1-201ENSMUST00000033158 Ighv2-6-8A0A0A6YWY9 116 aa12.33□□□□□ -0.44
Ubfd1-201ENSMUST00000033158 E130114P18RikF6S0S7 154 aa12.32□□□□□ -0.44
Ubfd1-201ENSMUST00000033158 CtrlQ9ER05 264 aa12.32□□□□□ -0.44
Ubfd1-201ENSMUST00000033158 Ighv3-3A0A0A6YWL2 116 aa12.32□□□□□ -0.44
Ubfd1-201ENSMUST00000033158 PrlhG3UWC3 86 aa12.32□□□□□ -0.44
Ubfd1-201ENSMUST00000033158 Ighv1-5A0A0A6YWG2 117 aa12.31□□□□□ -0.44
Ubfd1-201ENSMUST00000033158 Fam222aQ6PGH4 453 aa12.31□□□□□ -0.44
Ubfd1-201ENSMUST00000033158 Cryba4Q9JJV0 196 aa12.31□□□□□ -0.44
Ubfd1-201ENSMUST00000033158 Spink8Q09TK9 105 aa12.31□□□□□ -0.44
Ubfd1-201ENSMUST00000033158 Tet2Q4JK59 1912 aaKnown RBP12.31□□□□□ -0.44
Ubfd1-201ENSMUST00000033158 LhbO09108 141 aa12.3□□□□□ -0.44
Ubfd1-201ENSMUST00000033158 Hivep2Q3UHF7 2430 aa12.3□□□□□ -0.44
Ubfd1-201ENSMUST00000033158 Adamts20P59511 1906 aa12.3□□□□□ -0.44
Ubfd1-201ENSMUST00000033158 1700056E22RikF7CNM6 234 aa12.3□□□□□ -0.44
Ubfd1-201ENSMUST00000033158 Q9DAQ5 155 aa12.3□□□□□ -0.44
Ubfd1-201ENSMUST00000033158 Golgb1E9PVZ8 3238 aa12.29□□□□□ -0.44
Ubfd1-201ENSMUST00000033158 Gm10401E9Q3K6 71 aa12.28□□□□□ -0.44
Ubfd1-201ENSMUST00000033158 Gm10647E9Q8X0 124 aa12.28□□□□□ -0.44
Ubfd1-201ENSMUST00000033158 Tfpi2O35536 230 aa12.27□□□□□ -0.44
Ubfd1-201ENSMUST00000033158 Igf1P05017 153 aa12.27□□□□□ -0.44
Retrieved 100 of 22,080 RNA–protein pairs in 48.5 ms