RNA–Protein interactions for RNA: ENSMUST00000021956.8

Ddx41-201, Transcript of Probable ATP-dependent RNA helicase DDX41, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ddx41, Length 2,205 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41-201ENSMUST00000021956 Ndufs7Q9DC70 224 aa13.16□□□□□ -0.3
Ddx41-201ENSMUST00000021956 SbsponQ3UPR9 264 aa13.15□□□□□ -0.3
Ddx41-201ENSMUST00000021956 Cmya5Q70KF4 3739 aa13.15□□□□□ -0.3
Ddx41-201ENSMUST00000021956 Gm20730A0A075B5J6 119 aa13.15□□□□□ -0.31
Ddx41-201ENSMUST00000021956 Gata1P17679 413 aa13.15□□□□□ -0.31
Ddx41-201ENSMUST00000021956 MsmbO08540 113 aa13.14□□□□□ -0.31
Ddx41-201ENSMUST00000021956 Gm10509O88255 85 aa13.14□□□□□ -0.31
Ddx41-201ENSMUST00000021956 Ighv1-61P01749 117 aa13.14□□□□□ -0.31
Ddx41-201ENSMUST00000021956 Gm10490F6VBM2 120 aa13.13□□□□□ -0.31
Ddx41-201ENSMUST00000021956 Gm10553J3QPF1 123 aa13.13□□□□□ -0.31
Ddx41-201ENSMUST00000021956 Spink10Q8CAC8 162 aa13.13□□□□□ -0.31
Ddx41-201ENSMUST00000021956 OtoglF7A4A7 2325 aa13.13□□□□□ -0.31
Ddx41-201ENSMUST00000021956 CirbpP60824 172 aaKnown RBP13.13□□□□□ -0.31
Ddx41-201ENSMUST00000021956 Gm9747Q810H1 104 aa13.12□□□□□ -0.31
Ddx41-201ENSMUST00000021956 Ighv2-7A0A075B5Q8 116 aa13.12□□□□□ -0.31
Ddx41-201ENSMUST00000021956 1700010B08RikQ9DAI7 102 aa13.12□□□□□ -0.31
Ddx41-201ENSMUST00000021956 1810032O08RikE9PZV8 113 aa13.11□□□□□ -0.31
Ddx41-201ENSMUST00000021956 Mast4Q811L6 2618 aa13.11□□□□□ -0.31
Ddx41-201ENSMUST00000021956 Ighv5-9-1A0A0A6YVS4 126 aa13.11□□□□□ -0.31
Ddx41-201ENSMUST00000021956 PlaurP35456 327 aa13.11□□□□□ -0.31
Ddx41-201ENSMUST00000021956 Lrcol1Q3URS3 161 aa13.11□□□□□ -0.31
Ddx41-201ENSMUST00000021956 Ttc28Q80XJ3 2450 aa13.1□□□□□ -0.31
Ddx41-201ENSMUST00000021956 LystP97412 3788 aa13.1□□□□□ -0.31
Ddx41-201ENSMUST00000021956 Gm17455G3UW87 128 aa13.1□□□□□ -0.31
Ddx41-201ENSMUST00000021956 SpinklQ8CEK3 90 aa13.1□□□□□ -0.31
Ddx41-201ENSMUST00000021956 Ndufa3Q9CQ91 84 aa13.1□□□□□ -0.31
Ddx41-201ENSMUST00000021956 Synj2bpQ9D6K5 145 aa13.1□□□□□ -0.31
Ddx41-201ENSMUST00000021956 Trav13d-1A0A075B606 110 aa13.09□□□□□ -0.31
Ddx41-201ENSMUST00000021956 Trdv5A0A075B661 115 aa13.09□□□□□ -0.31
Ddx41-201ENSMUST00000021956 Phpt1Q9DAK9 124 aa13.09□□□□□ -0.31
Ddx41-201ENSMUST00000021956 Znf414Q9DCK4 299 aa13.09□□□□□ -0.31
Ddx41-201ENSMUST00000021956 Gm29666A0A087WQ99 126 aa13.08□□□□□ -0.32
Ddx41-201ENSMUST00000021956 Cops9Q3U898 57 aa13.08□□□□□ -0.32
Ddx41-201ENSMUST00000021956 Eif4ebp3Q80VV3 101 aa13.08□□□□□ -0.32
Ddx41-201ENSMUST00000021956 Ss18l2Q9D174 77 aa13.08□□□□□ -0.32
Ddx41-201ENSMUST00000021956 Fgf23Q9EPC2 251 aa13.08□□□□□ -0.32
Ddx41-201ENSMUST00000021956 Med13lQ6JPI3 2207 aa13.08□□□□□ -0.32
Ddx41-201ENSMUST00000021956 Trav9-2A0A075B647 113 aa13.08□□□□□ -0.32
Ddx41-201ENSMUST00000021956 Trav9-4A0A0B4J1K2 113 aa13.08□□□□□ -0.32
Ddx41-201ENSMUST00000021956 B230217C12RikE9Q3Z1 139 aa13.08□□□□□ -0.32
Ddx41-201ENSMUST00000021956 Igkv4-68A0A0B4J1I7 117 aa13.07□□□□□ -0.32
Ddx41-201ENSMUST00000021956 Gm9195A0A140LHT4 2805 aa13.07□□□□□ -0.32
Ddx41-201ENSMUST00000021956 Trav3-4A0A075B654 114 aa13.07□□□□□ -0.32
Ddx41-201ENSMUST00000021956 Col7a1Q63870 2944 aa13.06□□□□□ -0.32
Ddx41-201ENSMUST00000021956 Igkv4-91A0A075B5L2 119 aa13.06□□□□□ -0.32
Ddx41-201ENSMUST00000021956 4930432M17RikQ3V0W9 174 aa13.06□□□□□ -0.32
Ddx41-201ENSMUST00000021956 Dynlrb2Q9DAJ5 96 aa13.06□□□□□ -0.32
Ddx41-201ENSMUST00000021956 Dido1Q8C9B9 2256 aaKnown RBP13.06□□□□□ -0.32
Ddx41-201ENSMUST00000021956 AY761184Q9D848 116 aa13.05□□□□□ -0.32
Ddx41-201ENSMUST00000021956 Igkv4-78A0A0A6YYE5 119 aa13.05□□□□□ -0.32
Ddx41-201ENSMUST00000021956 Gm9922Q8C3P1 144 aa13.05□□□□□ -0.32
Ddx41-201ENSMUST00000021956 PspnO70300 156 aa13.04□□□□□ -0.32
Ddx41-201ENSMUST00000021956 Apoc4Q61268 124 aa13.04□□□□□ -0.32
Ddx41-201ENSMUST00000021956 Cd164l2Q9D6W7 172 aa13.04□□□□□ -0.32
Ddx41-201ENSMUST00000021956 TeppQ6IMH0 216 aa13.03□□□□□ -0.32
Ddx41-201ENSMUST00000021956 Gm17472A0A075B683 117 aa13.03□□□□□ -0.32
Ddx41-201ENSMUST00000021956 Fxyd5P97808 178 aa13.03□□□□□ -0.32
Ddx41-201ENSMUST00000021956 Rnf152Q8BG47 203 aa13.03□□□□□ -0.32
Ddx41-201ENSMUST00000021956 Ly6hQ9WUC3 139 aa13.03□□□□□ -0.32
Ddx41-201ENSMUST00000021956 Gm11020F6ZGD5 61 aa13.02□□□□□ -0.33
Ddx41-201ENSMUST00000021956 Gm4861Q8C5A4 106 aa13.02□□□□□ -0.33
Ddx41-201ENSMUST00000021956 A930009A15RikG3UYI6 118 aa13.01□□□□□ -0.33
Ddx41-201ENSMUST00000021956 P01823 113 aa13.01□□□□□ -0.33
Ddx41-201ENSMUST00000021956 TrrapQ80YV3 2565 aaKnown RBP13.01□□□□□ -0.33
Ddx41-201ENSMUST00000021956 Hivep2Q3UHF7 2430 aa13□□□□□ -0.33
Ddx41-201ENSMUST00000021956 HampQ9EQ21 83 aa13□□□□□ -0.33
Ddx41-201ENSMUST00000021956 Spry2Q9QXV8 315 aa13□□□□□ -0.33
Ddx41-201ENSMUST00000021956 Defa1P11477 93 aa13□□□□□ -0.33
Ddx41-201ENSMUST00000021956 Gm10577Q3UDV9 132 aa13□□□□□ -0.33
Ddx41-201ENSMUST00000021956 RetnQ99P87 114 aa13□□□□□ -0.33
Ddx41-201ENSMUST00000021956 Trav14d-3-dv8A0A075B619 120 aa12.99□□□□□ -0.33
Ddx41-201ENSMUST00000021956 Fhl2O70433 279 aa12.99□□□□□ -0.33
Ddx41-201ENSMUST00000021956 Armcx4E9PWM3 2356 aa12.99□□□□□ -0.33
Ddx41-201ENSMUST00000021956 Gm37988J3QM41 62 aa12.98□□□□□ -0.33
Ddx41-201ENSMUST00000021956 Atp5g1Q9CR84 136 aa12.98□□□□□ -0.33
Ddx41-201ENSMUST00000021956 Smim10l1A0A087WNQ7 89 aa12.98□□□□□ -0.33
Ddx41-201ENSMUST00000021956 4930546C10RikE9Q4Y3 121 aa12.98□□□□□ -0.33
Ddx41-201ENSMUST00000021956 Prss58Q8BW11 241 aa12.97□□□□□ -0.33
Ddx41-201ENSMUST00000021956 Sostdc1Q9CQN4 206 aa12.97□□□□□ -0.33
Ddx41-201ENSMUST00000021956 Col6a4A2AX52 2309 aa12.97□□□□□ -0.33
Ddx41-201ENSMUST00000021956 Znf740Q6NZQ6 180 aa12.97□□□□□ -0.33
Ddx41-201ENSMUST00000021956 Rnf183Q8QZS5 190 aa12.97□□□□□ -0.33
Ddx41-201ENSMUST00000021956 Esm1Q9QYY7 184 aa12.97□□□□□ -0.33
Ddx41-201ENSMUST00000021956 Lst1O08843 95 aa12.96□□□□□ -0.33
Ddx41-201ENSMUST00000021956 AngP21570 145 aa12.96□□□□□ -0.33
Ddx41-201ENSMUST00000021956 SelenowP63300 88 aa12.96□□□□□ -0.33
Ddx41-201ENSMUST00000021956 Spata25Q9DA57 226 aa12.96□□□□□ -0.34
Ddx41-201ENSMUST00000021956 FlncQ8VHX6 2726 aaKnown RBP12.95□□□□□ -0.34
Ddx41-201ENSMUST00000021956 Ighv1-58A0A075B5W9 117 aa12.95□□□□□ -0.34
Ddx41-201ENSMUST00000021956 PemtQ61907 199 aa12.95□□□□□ -0.34
Ddx41-201ENSMUST00000021956 Lage3Q9CR70 148 aa12.95□□□□□ -0.34
Ddx41-201ENSMUST00000021956 Ighv1-62-1A0A075B5U3 116 aa12.94□□□□□ -0.34
Ddx41-201ENSMUST00000021956 Ube2e2Q91W82 201 aa12.94□□□□□ -0.34
Ddx41-201ENSMUST00000021956 Trav11A0A0B4J1J9 114 aa12.94□□□□□ -0.34
Ddx41-201ENSMUST00000021956 P04219 140 aa12.94□□□□□ -0.34
Ddx41-201ENSMUST00000021956 Xcl1P47993 114 aa12.94□□□□□ -0.34
Ddx41-201ENSMUST00000021956 Defa16P50714 93 aa12.94□□□□□ -0.34
Ddx41-201ENSMUST00000021956 Utp20Q5XG71 2788 aaKnown RBP12.94□□□□□ -0.34
Ddx41-201ENSMUST00000021956 Trav13n-1A0A0G2JEU8 110 aa12.93□□□□□ -0.34
Ddx41-201ENSMUST00000021956 Gm5089A1L3C8 106 aa12.93□□□□□ -0.34
Retrieved 100 of 22,080 RNA–protein pairs in 148.6 ms