RNA–Protein interactions for RNA: ENSMUST00000015981.11

Sqstm1-201, Transcript of Sequestosome-1, mousemouse

TSL 1 (best) BASIC

Gene Sqstm1, Length 2,673 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sqstm1-201ENSMUST00000015981 Wfdc15aQ8BH89 80 aa12.94□□□□□ -0.34
Sqstm1-201ENSMUST00000015981 Ighv2-3A0A075B696 115 aa12.94□□□□□ -0.34
Sqstm1-201ENSMUST00000015981 Ighv1-11A0A0A6YWI9 117 aa12.94□□□□□ -0.34
Sqstm1-201ENSMUST00000015981 CirbpP60824 172 aaKnown RBP12.94□□□□□ -0.34
Sqstm1-201ENSMUST00000015981 Sptan1P16546 2472 aaKnown RBP12.93□□□□□ -0.34
Sqstm1-201ENSMUST00000015981 Ighv5-8A0A075B676 92 aa12.93□□□□□ -0.34
Sqstm1-201ENSMUST00000015981 Pglyrp4Q0VB07 374 aa12.93□□□□□ -0.34
Sqstm1-201ENSMUST00000015981 1700010B08RikQ9DAI7 102 aa12.93□□□□□ -0.34
Sqstm1-201ENSMUST00000015981 Dido1Q8C9B9 2256 aaKnown RBP12.93□□□□□ -0.34
Sqstm1-201ENSMUST00000015981 Gm10322F7D7I4 111 aa12.93□□□□□ -0.34
Sqstm1-201ENSMUST00000015981 Ighv1-72P01751 139 aa12.93□□□□□ -0.34
Sqstm1-201ENSMUST00000015981 Abca4O35600 2310 aa12.92□□□□□ -0.34
Sqstm1-201ENSMUST00000015981 Igkv4-91A0A075B5L2 119 aa12.92□□□□□ -0.34
Sqstm1-201ENSMUST00000015981 Gm17472A0A075B683 117 aa12.92□□□□□ -0.34
Sqstm1-201ENSMUST00000015981 Gm10490F6VBM2 120 aa12.92□□□□□ -0.34
Sqstm1-201ENSMUST00000015981 Sprr3O09116 238 aa12.92□□□□□ -0.34
Sqstm1-201ENSMUST00000015981 Trdv5A0A075B661 115 aa12.91□□□□□ -0.34
Sqstm1-201ENSMUST00000015981 Gm29666A0A087WQ99 126 aa12.91□□□□□ -0.34
Sqstm1-201ENSMUST00000015981 Ighv1-61P01749 117 aa12.91□□□□□ -0.34
Sqstm1-201ENSMUST00000015981 Gm10553J3QPF1 123 aa12.9□□□□□ -0.34
Sqstm1-201ENSMUST00000015981 Spata25Q9DA57 226 aa12.9□□□□□ -0.34
Sqstm1-201ENSMUST00000015981 Sec16aA2AIX1 2377 aa12.9□□□□□ -0.34
Sqstm1-201ENSMUST00000015981 Avpi1Q9D7H4 142 aa12.9□□□□□ -0.34
Sqstm1-201ENSMUST00000015981 D130052B06RikQ3UW13 202 aa12.89□□□□□ -0.35
Sqstm1-201ENSMUST00000015981 CdsnQ7TPC1 561 aa12.89□□□□□ -0.35
Sqstm1-201ENSMUST00000015981 Atp5g1Q9CR84 136 aa12.89□□□□□ -0.35
Sqstm1-201ENSMUST00000015981 Bri3P28662 125 aa12.89□□□□□ -0.35
Sqstm1-201ENSMUST00000015981 Spink12Q9D256 87 aa12.89□□□□□ -0.35
Sqstm1-201ENSMUST00000015981 4930564D02RikQ9D4S4 103 aa12.89□□□□□ -0.35
Sqstm1-201ENSMUST00000015981 AngP21570 145 aa12.88□□□□□ -0.35
Sqstm1-201ENSMUST00000015981 Gm10509O88255 85 aa12.88□□□□□ -0.35
Sqstm1-201ENSMUST00000015981 Igf1P05017 153 aa12.88□□□□□ -0.35
Sqstm1-201ENSMUST00000015981 Gm3618D3Z4P5 127 aa12.87□□□□□ -0.35
Sqstm1-201ENSMUST00000015981 P01823 113 aa12.87□□□□□ -0.35
Sqstm1-201ENSMUST00000015981 Sostdc1Q9CQN4 206 aa12.87□□□□□ -0.35
Sqstm1-201ENSMUST00000015981 Gm2916Q9D9B9 127 aa12.87□□□□□ -0.35
Sqstm1-201ENSMUST00000015981 Igkv4-78A0A0A6YYE5 119 aa12.87□□□□□ -0.35
Sqstm1-201ENSMUST00000015981 B230217C12RikE9Q3Z1 139 aa12.87□□□□□ -0.35
Sqstm1-201ENSMUST00000015981 5730596B20RikQ8BQ08 205 aa12.87□□□□□ -0.35
Sqstm1-201ENSMUST00000015981 Trav11A0A0B4J1J9 114 aa12.86□□□□□ -0.35
Sqstm1-201ENSMUST00000015981 1810032O08RikE9PZV8 113 aa12.86□□□□□ -0.35
Sqstm1-201ENSMUST00000015981 Cox17P56394 63 aa12.86□□□□□ -0.35
Sqstm1-201ENSMUST00000015981 Ighv2-7A0A075B5Q8 116 aa12.85□□□□□ -0.35
Sqstm1-201ENSMUST00000015981 Trav13n-1A0A0G2JEU8 110 aa12.85□□□□□ -0.35
Sqstm1-201ENSMUST00000015981 Fgfbp3Q1HCM0 245 aa12.85□□□□□ -0.35
Sqstm1-201ENSMUST00000015981 Trav9-2A0A075B647 113 aa12.85□□□□□ -0.35
Sqstm1-201ENSMUST00000015981 Trav9-4A0A0B4J1K2 113 aa12.85□□□□□ -0.35
Sqstm1-201ENSMUST00000015981 Gm10226O88253 85 aa12.85□□□□□ -0.35
Sqstm1-201ENSMUST00000015981 SelenowP63300 88 aa12.85□□□□□ -0.35
Sqstm1-201ENSMUST00000015981 Il19Q8CJ70 176 aa12.84□□□□□ -0.35
Sqstm1-201ENSMUST00000015981 Synj2bpQ9D6K5 145 aa12.84□□□□□ -0.35
Sqstm1-201ENSMUST00000015981 Gm20726G3UX18 150 aa12.84□□□□□ -0.35
Sqstm1-201ENSMUST00000015981 Lst1O08843 95 aa12.84□□□□□ -0.35
Sqstm1-201ENSMUST00000015981 PemtQ61907 199 aa12.84□□□□□ -0.35
Sqstm1-201ENSMUST00000015981 Xcl1P47993 114 aa12.83□□□□□ -0.36
Sqstm1-201ENSMUST00000015981 Cops9Q3U898 57 aa12.83□□□□□ -0.36
Sqstm1-201ENSMUST00000015981 LrbaQ9ESE1 2856 aa12.82□□□□□ -0.36
Sqstm1-201ENSMUST00000015981 Gm10542F6XDR3 90 aa12.81□□□□□ -0.36
Sqstm1-201ENSMUST00000015981 Defa4P28311 92 aa12.81□□□□□ -0.36
Sqstm1-201ENSMUST00000015981 Fxyd5P97808 178 aa12.81□□□□□ -0.36
Sqstm1-201ENSMUST00000015981 Igkv4-68A0A0B4J1I7 117 aa12.8□□□□□ -0.36
Sqstm1-201ENSMUST00000015981 Shisa2Q8QZV2 295 aa12.8□□□□□ -0.36
Sqstm1-201ENSMUST00000015981 Klk11Q9QYN3 276 aa12.8□□□□□ -0.36
Sqstm1-201ENSMUST00000015981 Sorl1O88307 2215 aaKnown RBP12.79□□□□□ -0.36
Sqstm1-201ENSMUST00000015981 4930546C10RikE9Q4Y3 121 aa12.79□□□□□ -0.36
Sqstm1-201ENSMUST00000015981 7530416G11RikJ3QJX6 159 aa12.79□□□□□ -0.36
Sqstm1-201ENSMUST00000015981 MalO09198 153 aa12.79□□□□□ -0.36
Sqstm1-201ENSMUST00000015981 Hist1h4aP62806 103 aaKnown RBP12.79□□□□□ -0.36
Sqstm1-201ENSMUST00000015981 Gm10577Q3UDV9 132 aa12.79□□□□□ -0.36
Sqstm1-201ENSMUST00000015981 PlaurP35456 327 aa12.78□□□□□ -0.36
Sqstm1-201ENSMUST00000015981 A830031A19RikQ8BNT5 113 aa12.78□□□□□ -0.36
Sqstm1-201ENSMUST00000015981 Prpf8Q99PV0 2335 aaKnown RBP12.78□□□□□ -0.36
Sqstm1-201ENSMUST00000015981 Ighv1-62-1A0A075B5U3 116 aa12.77□□□□□ -0.36
Sqstm1-201ENSMUST00000015981 Gm9513B3GLJ6 99 aa12.77□□□□□ -0.36
Sqstm1-201ENSMUST00000015981 1700011M02RikB1AX35 88 aa12.77□□□□□ -0.37
Sqstm1-201ENSMUST00000015981 Ankhd1E9PUR0 2548 aaKnown RBP12.77□□□□□ -0.37
Sqstm1-201ENSMUST00000015981 Ighv5-9-1A0A0A6YVS4 126 aa12.76□□□□□ -0.37
Sqstm1-201ENSMUST00000015981 CrygdP04342 174 aa12.76□□□□□ -0.37
Sqstm1-201ENSMUST00000015981 Dmbt1Q60997 2085 aa12.76□□□□□ -0.37
Sqstm1-201ENSMUST00000015981 Ang3P97802 145 aa12.76□□□□□ -0.37
Sqstm1-201ENSMUST00000015981 Spg11Q3UHA3 2430 aa12.76□□□□□ -0.37
Sqstm1-201ENSMUST00000015981 Smlr1J3QMJ4 66 aa12.75□□□□□ -0.37
Sqstm1-201ENSMUST00000015981 Sh2d1aO88890 126 aa12.75□□□□□ -0.37
Sqstm1-201ENSMUST00000015981 4930524J08RikQ9CUJ5 163 aa12.75□□□□□ -0.37
Sqstm1-201ENSMUST00000015981 Dynlrb2Q9DAJ5 96 aa12.75□□□□□ -0.37
Sqstm1-201ENSMUST00000015981 Cox6b1P56391 86 aaKnown RBP12.75□□□□□ -0.37
Sqstm1-201ENSMUST00000015981 4930518I15RikQ3V2W7 57 aa12.75□□□□□ -0.37
Sqstm1-201ENSMUST00000015981 Lage3Q9CR70 148 aa12.75□□□□□ -0.37
Sqstm1-201ENSMUST00000015981 4930519P11RikQ9CUJ8 166 aa12.75□□□□□ -0.37
Sqstm1-201ENSMUST00000015981 Ubr5Q80TP3 2792 aa12.75□□□□□ -0.37
Sqstm1-201ENSMUST00000015981 Dand5Q76LW6 185 aa12.75□□□□□ -0.37
Sqstm1-201ENSMUST00000015981 Col6a4A2AX52 2309 aa12.74□□□□□ -0.37
Sqstm1-201ENSMUST00000015981 Igkv4-79A0A075B5L8 119 aa12.74□□□□□ -0.37
Sqstm1-201ENSMUST00000015981 Gm10549Q3URY4 149 aa12.74□□□□□ -0.37
Sqstm1-201ENSMUST00000015981 Dnal4Q9DCM4 105 aa12.74□□□□□ -0.37
Sqstm1-201ENSMUST00000015981 Gm9925F6T2U3 160 aa12.74□□□□□ -0.37
Sqstm1-201ENSMUST00000015981 Vmo1Q5SXG7 201 aa12.74□□□□□ -0.37
Sqstm1-201ENSMUST00000015981 Cspg4Q8VHY0 2327 aa12.73□□□□□ -0.37
Sqstm1-201ENSMUST00000015981 Defb33Q30KN3 62 aa12.73□□□□□ -0.37
Sqstm1-201ENSMUST00000015981 Gm10300Q8C8P7 189 aa12.73□□□□□ -0.37
Retrieved 100 of 22,080 RNA–protein pairs in 518.4 ms