RNA–Protein interactions for RNA: ENSMUST00000001147.4

Col6a1-201, Transcript of Collagen alpha-1(VI) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col6a1, Length 4,100 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1-201ENSMUST00000001147 Tomm7Q9D173 55 aa7.09□□□□□ -1.27
Col6a1-201ENSMUST00000001147 1520401A03RikA0A0J9YVH6 598 aa7.09□□□□□ -1.27
Col6a1-201ENSMUST00000001147 LeprotO89013 131 aa7.09□□□□□ -1.27
Col6a1-201ENSMUST00000001147 Pla2g2aP31482 146 aa7.09□□□□□ -1.27
Col6a1-201ENSMUST00000001147 PlaurP35456 327 aa7.09□□□□□ -1.27
Col6a1-201ENSMUST00000001147 Pla2g2cP48076 150 aa7.09□□□□□ -1.27
Col6a1-201ENSMUST00000001147 CnfnQ6PCW6 111 aa7.09□□□□□ -1.27
Col6a1-201ENSMUST00000001147 Trav4d-3A0A075B625 110 aa7.08□□□□□ -1.28
Col6a1-201ENSMUST00000001147 Ighv1-49A0A0A6YWX2 117 aa7.08□□□□□ -1.28
Col6a1-201ENSMUST00000001147 FcorP0DJI6 106 aa7.08□□□□□ -1.28
Col6a1-201ENSMUST00000001147 Ighv1-75A0A075B5Y2 117 aa7.08□□□□□ -1.28
Col6a1-201ENSMUST00000001147 Trav7-6A0A075B640 112 aa7.08□□□□□ -1.28
Col6a1-201ENSMUST00000001147 Ighv5-9-1A0A0A6YVS4 126 aa7.08□□□□□ -1.28
Col6a1-201ENSMUST00000001147 Rpl36aP83882 106 aaKnown RBP7.08□□□□□ -1.28
Col6a1-201ENSMUST00000001147 Pip4p1Q3TWL2 284 aa7.08□□□□□ -1.28
Col6a1-201ENSMUST00000001147 Timm17aQ9Z0V8 171 aa7.08□□□□□ -1.28
Col6a1-201ENSMUST00000001147 Igkv4-71A0A0G2JEH0 117 aa7.07□□□□□ -1.28
Col6a1-201ENSMUST00000001147 Gm10251J3QPM5 127 aa7.07□□□□□ -1.28
Col6a1-201ENSMUST00000001147 Smim1P0C8K7 78 aa7.07□□□□□ -1.28
Col6a1-201ENSMUST00000001147 Igkv4-70A0A0B4J1I5 116 aa7.07□□□□□ -1.28
Col6a1-201ENSMUST00000001147 Tmem243B2RVB9 118 aa7.07□□□□□ -1.28
Col6a1-201ENSMUST00000001147 Socs3O35718 225 aa7.07□□□□□ -1.28
Col6a1-201ENSMUST00000001147 Odf1Q61999 247 aa7.07□□□□□ -1.28
Col6a1-201ENSMUST00000001147 Zc2hc1bQ9D534 172 aa7.07□□□□□ -1.28
Col6a1-201ENSMUST00000001147 Hcfc1Q61191 2045 aaKnown RBP7.07□□□□□ -1.28
Col6a1-201ENSMUST00000001147 Trbv16A0A0B4J1H3 115 aa7.07□□□□□ -1.28
Col6a1-201ENSMUST00000001147 MalO09198 153 aa7.07□□□□□ -1.28
Col6a1-201ENSMUST00000001147 SrarpQ3ULG3 163 aa7.07□□□□□ -1.28
Col6a1-201ENSMUST00000001147 Fam222aQ6PGH4 453 aa7.07□□□□□ -1.28
Col6a1-201ENSMUST00000001147 B230307C23RikQ8BLB2 64 aa7.07□□□□□ -1.28
Col6a1-201ENSMUST00000001147 Ighv2-3A0A075B696 115 aa7.06□□□□□ -1.28
Col6a1-201ENSMUST00000001147 Smrp1Q2MH31 260 aa7.06□□□□□ -1.28
Col6a1-201ENSMUST00000001147 BC048562Q80ZQ7 204 aa7.06□□□□□ -1.28
Col6a1-201ENSMUST00000001147 Wdr38Q9D994 303 aa7.06□□□□□ -1.28
Col6a1-201ENSMUST00000001147 Gm9925F6T2U3 160 aa7.06□□□□□ -1.28
Col6a1-201ENSMUST00000001147 Gm9913Q8BQQ2 135 aa7.06□□□□□ -1.28
Col6a1-201ENSMUST00000001147 Klk5Q9D140 293 aa7.06□□□□□ -1.28
Col6a1-201ENSMUST00000001147 Pfn2Q9JJV2 140 aa7.06□□□□□ -1.28
Col6a1-201ENSMUST00000001147 Spink13Q3UTS8 97 aa7.05□□□□□ -1.28
Col6a1-201ENSMUST00000001147 H1fxQ80ZM5 188 aa7.05□□□□□ -1.28
Col6a1-201ENSMUST00000001147 Gm9936Q8C864 160 aa7.05□□□□□ -1.28
Col6a1-201ENSMUST00000001147 Ighv12-3A0A075B5T1 117 aa7.04□□□□□ -1.28
Col6a1-201ENSMUST00000001147 Defa27F2Z403 93 aa7.04□□□□□ -1.28
Col6a1-201ENSMUST00000001147 Adgrg4B7ZCC9 3073 aa7.04□□□□□ -1.28
Col6a1-201ENSMUST00000001147 Trav13n-1A0A0G2JEU8 110 aa7.04□□□□□ -1.28
Col6a1-201ENSMUST00000001147 GhrhP16043 103 aa7.04□□□□□ -1.28
Col6a1-201ENSMUST00000001147 Polr2kQ63871 58 aa7.04□□□□□ -1.28
Col6a1-201ENSMUST00000001147 Q9D8Q6 235 aa7.04□□□□□ -1.28
Col6a1-201ENSMUST00000001147 Morn5Q9DAI9 170 aa7.04□□□□□ -1.28
Col6a1-201ENSMUST00000001147 Ighv3-3A0A0A6YWL2 116 aa7.03□□□□□ -1.28
Col6a1-201ENSMUST00000001147 Nbeal1E9PYP2 2688 aa7.03□□□□□ -1.28
Col6a1-201ENSMUST00000001147 Gm10542F6XDR3 90 aa7.03□□□□□ -1.28
Col6a1-201ENSMUST00000001147 Gm7102J3QQ10 178 aa7.03□□□□□ -1.28
Col6a1-201ENSMUST00000001147 Gm21748Q3UE70 102 aa7.03□□□□□ -1.28
Col6a1-201ENSMUST00000001147 4930470P17RikQ9D542 155 aa7.03□□□□□ -1.28
Col6a1-201ENSMUST00000001147 Trav9d-3A0A075B695 113 aa7.03□□□□□ -1.28
Col6a1-201ENSMUST00000001147 Gm10226O88253 85 aa7.03□□□□□ -1.28
Col6a1-201ENSMUST00000001147 Pet100P0DJE0 76 aa7.03□□□□□ -1.28
Col6a1-201ENSMUST00000001147 P84751 237 aa7.03□□□□□ -1.28
Col6a1-201ENSMUST00000001147 Prr9Q8BV84 116 aa7.03□□□□□ -1.28
Col6a1-201ENSMUST00000001147 Ifitm1Q9D103 106 aa7.03□□□□□ -1.28
Col6a1-201ENSMUST00000001147 Spink12Q9D256 87 aa7.03□□□□□ -1.28
Col6a1-201ENSMUST00000001147 2310009B15RikA0A0A6YWI4 143 aa7.03□□□□□ -1.28
Col6a1-201ENSMUST00000001147 Ighv8-5A0A0A6YY60 119 aa7.03□□□□□ -1.28
Col6a1-201ENSMUST00000001147 Trav9d-4A0A0G2JG37 103 aa7.03□□□□□ -1.28
Col6a1-201ENSMUST00000001147 Cfap126Q6P8X9 189 aa7.03□□□□□ -1.28
Col6a1-201ENSMUST00000001147 Glrp1E9Q9S8 174 aa7.02□□□□□ -1.29
Col6a1-201ENSMUST00000001147 Ang3P97802 145 aa7.02□□□□□ -1.29
Col6a1-201ENSMUST00000001147 Nop10Q9CQS2 64 aa7.02□□□□□ -1.29
Col6a1-201ENSMUST00000001147 Ighv1-66A0A075B5X5 117 aa7.02□□□□□ -1.29
Col6a1-201ENSMUST00000001147 Igkv6-13A0A0G2JGY3 119 aa7.02□□□□□ -1.29
Col6a1-201ENSMUST00000001147 Pglyrp1O88593 182 aa7.02□□□□□ -1.29
Col6a1-201ENSMUST00000001147 Defb18Q30KP5 85 aa7.02□□□□□ -1.29
Col6a1-201ENSMUST00000001147 Gphb5Q812B2 130 aa7.02□□□□□ -1.29
Col6a1-201ENSMUST00000001147 Brk1Q91VR8 75 aa7.02□□□□□ -1.29
Col6a1-201ENSMUST00000001147 Cdip1Q9DB75 208 aa7.02□□□□□ -1.29
Col6a1-201ENSMUST00000001147 Atp5g3P56384 141 aa7.01□□□□□ -1.29
Col6a1-201ENSMUST00000001147 Atp5g1Q9CR84 136 aa7.01□□□□□ -1.29
Col6a1-201ENSMUST00000001147 4930442H23RikQ9D5G7 103 aa7.01□□□□□ -1.29
Col6a1-201ENSMUST00000001147 Gm16381A0A1Y7VKT9 73 aa7.01□□□□□ -1.29
Col6a1-201ENSMUST00000001147 Gcn1E9PVA8 2671 aaKnown RBP7.01□□□□□ -1.29
Col6a1-201ENSMUST00000001147 DspE9Q557 2883 aaKnown RBP7.01□□□□□ -1.29
Col6a1-201ENSMUST00000001147 Leap2Q91V13 76 aa7.01□□□□□ -1.29
Col6a1-201ENSMUST00000001147 Igf1P05017 153 aa7□□□□□ -1.29
Col6a1-201ENSMUST00000001147 AtrQ9JKK8 2635 aa7□□□□□ -1.29
Col6a1-201ENSMUST00000001147 Ighv1-85A0A075B5Y6 117 aa7□□□□□ -1.29
Col6a1-201ENSMUST00000001147 Zzef1Q5SSH7 2924 aa7□□□□□ -1.29
Col6a1-201ENSMUST00000001147 Prh1P05142 261 aa6.99□□□□□ -1.29
Col6a1-201ENSMUST00000001147 Gata1P17679 413 aa6.99□□□□□ -1.29
Col6a1-201ENSMUST00000001147 Ccl21aP84444 133 aa6.99□□□□□ -1.29
Col6a1-201ENSMUST00000001147 Ccl21bP86792 133 aa6.99□□□□□ -1.29
Col6a1-201ENSMUST00000001147 Ccl21cP86793 133 aa6.99□□□□□ -1.29
Col6a1-201ENSMUST00000001147 Defb29Q8BGW9 78 aa6.99□□□□□ -1.29
Col6a1-201ENSMUST00000001147 Mrpl52Q9D0Y8 121 aa6.99□□□□□ -1.29
Col6a1-201ENSMUST00000001147 Akap9Q70FJ1 3797 aa6.99□□□□□ -1.29
Col6a1-201ENSMUST00000001147 Smim26Q3V460 107 aa6.99□□□□□ -1.29
Col6a1-201ENSMUST00000001147 Gm4861Q8C5A4 106 aa6.99□□□□□ -1.29
Col6a1-201ENSMUST00000001147 Q9DAB9 146 aa6.99□□□□□ -1.29
Col6a1-201ENSMUST00000001147 FasnP19096 2504 aaKnown RBP6.99□□□□□ -1.29
Col6a1-201ENSMUST00000001147 Gm10490F6VBM2 120 aa6.98□□□□□ -1.29
Retrieved 100 of 22,080 RNA–protein pairs in 131.3 ms