RNA–Protein interactions for RNA: ENSMUST00000211140.1

Ptpre-207, Transcript of Receptor-type tyrosine-protein phosphatase epsilon, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Ptpre, Length 5,753 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptpre-207ENSMUST00000211140 Gm44965A0A0N4SVR3 59 aa13.11□□□□□ -0.31
Ptpre-207ENSMUST00000211140 Tmem223Q9CQE2 199 aaKnown RBP13.11□□□□□ -0.31
Ptpre-207ENSMUST00000211140 P01745 121 aa13.1□□□□□ -0.31
Ptpre-207ENSMUST00000211140 Fgf6P21658 208 aa13.1□□□□□ -0.31
Ptpre-207ENSMUST00000211140 Prpf8Q99PV0 2335 aaKnown RBP13.1□□□□□ -0.31
Ptpre-207ENSMUST00000211140 Ighv12-3A0A075B5T1 117 aa13.1□□□□□ -0.31
Ptpre-207ENSMUST00000211140 Ndufa4l2Q4FZG9 87 aa13.1□□□□□ -0.31
Ptpre-207ENSMUST00000211140 Igkv8-18A0A0B4J1J3 123 aa13.1□□□□□ -0.31
Ptpre-207ENSMUST00000211140 Zmat4Q8BZ94 229 aa13.1□□□□□ -0.31
Ptpre-207ENSMUST00000211140 Klk5Q9D140 293 aa13.1□□□□□ -0.31
Ptpre-207ENSMUST00000211140 Ighv2-6A0A075B6A7 116 aa13.09□□□□□ -0.31
Ptpre-207ENSMUST00000211140 Gm9958Q8C9U4 106 aa13.09□□□□□ -0.31
Ptpre-207ENSMUST00000211140 P06328 117 aa13.09□□□□□ -0.31
Ptpre-207ENSMUST00000211140 Ormdl1Q921I0 153 aa13.09□□□□□ -0.31
Ptpre-207ENSMUST00000211140 Defb18Q30KP5 85 aa13.09□□□□□ -0.31
Ptpre-207ENSMUST00000211140 Zfand3Q497H0 227 aa13.09□□□□□ -0.31
Ptpre-207ENSMUST00000211140 PpdpfQ9CR37 115 aa13.09□□□□□ -0.31
Ptpre-207ENSMUST00000211140 CadB2RQC6 2225 aa13.08□□□□□ -0.31
Ptpre-207ENSMUST00000211140 Ighv1-11A0A0A6YWI9 117 aa13.08□□□□□ -0.32
Ptpre-207ENSMUST00000211140 Fam222aQ6PGH4 453 aa13.08□□□□□ -0.32
Ptpre-207ENSMUST00000211140 Gm9913Q8BQQ2 135 aa13.08□□□□□ -0.32
Ptpre-207ENSMUST00000211140 Gm3618D3Z4P5 127 aa13.08□□□□□ -0.32
Ptpre-207ENSMUST00000211140 Rp1l1Q8CGM2 1859 aa13.08□□□□□ -0.32
Ptpre-207ENSMUST00000211140 Spink4O35679 86 aa13.07□□□□□ -0.32
Ptpre-207ENSMUST00000211140 Nsun4C4P6S0 806 aaKnown RBP13.07□□□□□ -0.32
Ptpre-207ENSMUST00000211140 Pla2g2aP31482 146 aa13.07□□□□□ -0.32
Ptpre-207ENSMUST00000211140 P84751 237 aa13.07□□□□□ -0.32
Ptpre-207ENSMUST00000211140 Gm17577J3QNF7 156 aa13.07□□□□□ -0.32
Ptpre-207ENSMUST00000211140 Map6d1Q14BB9 191 aa13.07□□□□□ -0.32
Ptpre-207ENSMUST00000211140 Triap1Q9D8Z2 76 aa13.07□□□□□ -0.32
Ptpre-207ENSMUST00000211140 Ebi3O35228 228 aa13.07□□□□□ -0.32
Ptpre-207ENSMUST00000211140 Tmem254aP0DN89 123 aa13.06□□□□□ -0.32
Ptpre-207ENSMUST00000211140 Tmem254bP0DN90 123 aa13.06□□□□□ -0.32
Ptpre-207ENSMUST00000211140 Tmem254cP0DN91 123 aa13.06□□□□□ -0.32
Ptpre-207ENSMUST00000211140 AW146154Q3TPQ7 468 aa13.06□□□□□ -0.32
Ptpre-207ENSMUST00000211140 Igkv3-5A0A140T8M6 119 aa13.06□□□□□ -0.32
Ptpre-207ENSMUST00000211140 Igf1P05017 153 aa13.06□□□□□ -0.32
Ptpre-207ENSMUST00000211140 B9d2Q3UK10 175 aa13.06□□□□□ -0.32
Ptpre-207ENSMUST00000211140 Rpl18aP62717 176 aaKnown RBP13.05□□□□□ -0.32
Ptpre-207ENSMUST00000211140 Ncoa6Q9JL19 2067 aa13.05□□□□□ -0.32
Ptpre-207ENSMUST00000211140 Gm37389A0A0A6YW05 95 aa13.05□□□□□ -0.32
Ptpre-207ENSMUST00000211140 P01747 120 aa13.05□□□□□ -0.32
Ptpre-207ENSMUST00000211140 Fxyd5P97808 178 aa13.05□□□□□ -0.32
Ptpre-207ENSMUST00000211140 Rpl39lQ9CQD0 51 aa13.05□□□□□ -0.32
Ptpre-207ENSMUST00000211140 4930470P17RikQ9D542 155 aa13.05□□□□□ -0.32
Ptpre-207ENSMUST00000211140 Arfgef3Q3UGY8 2170 aa13.04□□□□□ -0.32
Ptpre-207ENSMUST00000211140 Vpreb2P13373 142 aa13.04□□□□□ -0.32
Ptpre-207ENSMUST00000211140 Gm14137Q8CE97 175 aa13.04□□□□□ -0.32
Ptpre-207ENSMUST00000211140 Trav9n-4A0A075B631 113 aa13.04□□□□□ -0.32
Ptpre-207ENSMUST00000211140 Ighv8-12A0A0G2JDE1 119 aa13.03□□□□□ -0.32
Ptpre-207ENSMUST00000211140 Gm12353A2AGJ4 60 aa13.03□□□□□ -0.32
Ptpre-207ENSMUST00000211140 CenpeQ6RT24 2474 aaKnown RBP13.03□□□□□ -0.32
Ptpre-207ENSMUST00000211140 Reg3bP35230 175 aa13.03□□□□□ -0.32
Ptpre-207ENSMUST00000211140 Tmem213Q08EA8 116 aa13.02□□□□□ -0.32
Ptpre-207ENSMUST00000211140 Abca4O35600 2310 aa13.02□□□□□ -0.33
Ptpre-207ENSMUST00000211140 Plxnb1Q8CJH3 2119 aa13.02□□□□□ -0.33
Ptpre-207ENSMUST00000211140 Gm5878E9PUB3 99 aa13.01□□□□□ -0.33
Ptpre-207ENSMUST00000211140 1700012A03RikQ9DAF1 130 aa13.01□□□□□ -0.33
Ptpre-207ENSMUST00000211140 Ncor1Q60974 2453 aa13.01□□□□□ -0.33
Ptpre-207ENSMUST00000211140 Q9DAQ5 155 aa13.01□□□□□ -0.33
Ptpre-207ENSMUST00000211140 SvipQ3UZP4 77 aa13.01□□□□□ -0.33
Ptpre-207ENSMUST00000211140 Higd2aQ9CQJ1 106 aa13.01□□□□□ -0.33
Ptpre-207ENSMUST00000211140 Dennd4cA6H8H2 1906 aa13.01□□□□□ -0.33
Ptpre-207ENSMUST00000211140 Ube2aQ9Z255 152 aa13.01□□□□□ -0.33
Ptpre-207ENSMUST00000211140 Gm10735Q3US96 136 aa13□□□□□ -0.33
Ptpre-207ENSMUST00000211140 Naa38Q9D2U5 125 aa13□□□□□ -0.33
Ptpre-207ENSMUST00000211140 Sh2d1aO88890 126 aa13□□□□□ -0.33
Ptpre-207ENSMUST00000211140 Rnase1P00683 149 aa13□□□□□ -0.33
Ptpre-207ENSMUST00000211140 Odf3Q920N1 254 aa13□□□□□ -0.33
Ptpre-207ENSMUST00000211140 Ighv1-75A0A075B5Y2 117 aa13□□□□□ -0.33
Ptpre-207ENSMUST00000211140 CrygcQ61597 174 aa12.99□□□□□ -0.33
Ptpre-207ENSMUST00000211140 Pde6gP09174 87 aa12.98□□□□□ -0.33
Ptpre-207ENSMUST00000211140 AvpP35455 168 aa12.98□□□□□ -0.33
Ptpre-207ENSMUST00000211140 Ypel4Q65Z93 127 aa12.98□□□□□ -0.33
Ptpre-207ENSMUST00000211140 Col24a1Q30D77 1733 aa12.98□□□□□ -0.33
Ptpre-207ENSMUST00000211140 Vpreb3D3Z6J4 130 aa12.98□□□□□ -0.33
Ptpre-207ENSMUST00000211140 Sdk2Q6V4S5 2176 aa12.98□□□□□ -0.33
Ptpre-207ENSMUST00000211140 P01820 115 aa12.98□□□□□ -0.33
Ptpre-207ENSMUST00000211140 P18527 97 aa12.97□□□□□ -0.33
Ptpre-207ENSMUST00000211140 Cfc1P97766 202 aa12.97□□□□□ -0.33
Ptpre-207ENSMUST00000211140 Prr12E9PYL2 2035 aaKnown RBP12.97□□□□□ -0.33
Ptpre-207ENSMUST00000211140 Igkv3-10A0A0G2JGN0 119 aa12.96□□□□□ -0.33
Ptpre-207ENSMUST00000211140 P01659 112 aa12.96□□□□□ -0.33
Ptpre-207ENSMUST00000211140 Eif4ebp1Q60876 117 aa12.96□□□□□ -0.33
Ptpre-207ENSMUST00000211140 Usf3B2RUQ2 2221 aa12.96□□□□□ -0.33
Ptpre-207ENSMUST00000211140 PtprsB0V2N1 1907 aa12.96□□□□□ -0.34
Ptpre-207ENSMUST00000211140 Sec16aA2AIX1 2377 aa12.96□□□□□ -0.34
Ptpre-207ENSMUST00000211140 Q9CX25 107 aa12.95□□□□□ -0.34
Ptpre-207ENSMUST00000211140 Plxnb3Q9QY40 1902 aa12.95□□□□□ -0.34
Ptpre-207ENSMUST00000211140 Col4a6B1AVK5 1691 aa12.95□□□□□ -0.34
Ptpre-207ENSMUST00000211140 Ighv1-85A0A075B5Y6 117 aa12.95□□□□□ -0.34
Ptpre-207ENSMUST00000211140 Gm5629P06327 117 aa12.94□□□□□ -0.34
Ptpre-207ENSMUST00000211140 Tfpi2O35536 230 aa12.94□□□□□ -0.34
Ptpre-207ENSMUST00000211140 Tet1Q3URK3 2007 aaKnown RBP12.94□□□□□ -0.34
Ptpre-207ENSMUST00000211140 Ighv1-82A0A0G2JEU7 117 aa12.94□□□□□ -0.34
Ptpre-207ENSMUST00000211140 9530003J23RikQ8BM26 151 aa12.94□□□□□ -0.34
Ptpre-207ENSMUST00000211140 CtrlQ9ER05 264 aa12.94□□□□□ -0.34
Ptpre-207ENSMUST00000211140 Gm28539A0A087WSL9 92 aa12.93□□□□□ -0.34
Ptpre-207ENSMUST00000211140 FcorP0DJI6 106 aa12.93□□□□□ -0.34
Ptpre-207ENSMUST00000211140 Gvin1Q80SU7 2427 aa12.93□□□□□ -0.34
Retrieved 100 of 22,080 RNA–protein pairs in 90.1 ms