RNA–Protein interactions for RNA: ENSMUST00000159405.2

Pcdh1-202, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 5 BASIC

Gene Pcdh1, Length 3,880 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-202ENSMUST00000159405 Fam216aQ9DB54 251 aa9.34□□□□□ -0.91
Pcdh1-202ENSMUST00000159405 Trav14d-3-dv8A0A075B619 120 aa9.33□□□□□ -0.92
Pcdh1-202ENSMUST00000159405 Gm10521E9PZK0 135 aa9.33□□□□□ -0.92
Pcdh1-202ENSMUST00000159405 SmcpP15265 143 aa9.33□□□□□ -0.92
Pcdh1-202ENSMUST00000159405 Fam216bQ8CC14 138 aa9.33□□□□□ -0.92
Pcdh1-202ENSMUST00000159405 Q4KKZ1 196 aa9.33□□□□□ -0.92
Pcdh1-202ENSMUST00000159405 Srsf2Q62093 221 aaKnown RBP9.33□□□□□ -0.92
Pcdh1-202ENSMUST00000159405 Stpg1Q9D2F5 341 aa9.33□□□□□ -0.92
Pcdh1-202ENSMUST00000159405 Samd13D3YUG0 102 aa9.32□□□□□ -0.92
Pcdh1-202ENSMUST00000159405 P01725 110 aa9.32□□□□□ -0.92
Pcdh1-202ENSMUST00000159405 Pygo1Q9D0P5 417 aa9.32□□□□□ -0.92
Pcdh1-202ENSMUST00000159405 ScxQ64124 207 aa9.32□□□□□ -0.92
Pcdh1-202ENSMUST00000159405 Gm26566Q8CAC1 153 aa9.32□□□□□ -0.92
Pcdh1-202ENSMUST00000159405 4930544G11RikQ9CR99 193 aa9.32□□□□□ -0.92
Pcdh1-202ENSMUST00000159405 Bub3Q9WVA3 326 aa9.32□□□□□ -0.92
Pcdh1-202ENSMUST00000159405 Igkv20-101-2A0A0G2JDU3 113 aa9.32□□□□□ -0.92
Pcdh1-202ENSMUST00000159405 CntfrO88507 372 aa9.32□□□□□ -0.92
Pcdh1-202ENSMUST00000159405 CrygdP04342 174 aa9.32□□□□□ -0.92
Pcdh1-202ENSMUST00000159405 Ighv1-31A0A0A6YWK5 117 aa9.31□□□□□ -0.92
Pcdh1-202ENSMUST00000159405 Tmem86bQ497J1 226 aa9.31□□□□□ -0.92
Pcdh1-202ENSMUST00000159405 Ss18Q62280 418 aa9.31□□□□□ -0.92
Pcdh1-202ENSMUST00000159405 Ly6lH3BJG9 140 aa9.31□□□□□ -0.92
Pcdh1-202ENSMUST00000159405 LeprotO89013 131 aa9.31□□□□□ -0.92
Pcdh1-202ENSMUST00000159405 P01748 117 aa9.31□□□□□ -0.92
Pcdh1-202ENSMUST00000159405 Taf15Q8BQ46 557 aaKnown RBP9.31□□□□□ -0.92
Pcdh1-202ENSMUST00000159405 Map6d1Q14BB9 191 aa9.31□□□□□ -0.92
Pcdh1-202ENSMUST00000159405 Gm9936Q8C864 160 aa9.31□□□□□ -0.92
Pcdh1-202ENSMUST00000159405 Dand5Q76LW6 185 aa9.31□□□□□ -0.92
Pcdh1-202ENSMUST00000159405 Tmem263Q9DAM7 115 aa9.31□□□□□ -0.92
Pcdh1-202ENSMUST00000159405 Obox8V9GWY9 217 aa9.31□□□□□ -0.92
Pcdh1-202ENSMUST00000159405 Zfhx4Q9JJN2 3550 aa9.3□□□□□ -0.92
Pcdh1-202ENSMUST00000159405 Gm884A2A9H6 3643 aa9.3□□□□□ -0.92
Pcdh1-202ENSMUST00000159405 SbsponQ3UPR9 264 aa9.3□□□□□ -0.92
Pcdh1-202ENSMUST00000159405 Glrp1E9Q9S8 174 aa9.3□□□□□ -0.92
Pcdh1-202ENSMUST00000159405 Fhl1P97447 280 aaKnown RBP9.3□□□□□ -0.92
Pcdh1-202ENSMUST00000159405 Ang2Q64438 145 aa9.3□□□□□ -0.92
Pcdh1-202ENSMUST00000159405 Xcl1P47993 114 aa9.29□□□□□ -0.92
Pcdh1-202ENSMUST00000159405 Mapk1ip1lQ8BH93 242 aa9.29□□□□□ -0.92
Pcdh1-202ENSMUST00000159405 Gm9922Q8C3P1 144 aa9.29□□□□□ -0.92
Pcdh1-202ENSMUST00000159405 Naa38Q9D2U5 125 aa9.29□□□□□ -0.92
Pcdh1-202ENSMUST00000159405 Wisp2Q9Z0G4 251 aa9.29□□□□□ -0.92
Pcdh1-202ENSMUST00000159405 Gm7102J3QQ10 178 aa9.28□□□□□ -0.92
Pcdh1-202ENSMUST00000159405 Svs5P30933 122 aa9.28□□□□□ -0.92
Pcdh1-202ENSMUST00000159405 Spata46Q4FZF2 204 aa9.28□□□□□ -0.92
Pcdh1-202ENSMUST00000159405 9430069I07RikQ9CX21 111 aa9.28□□□□□ -0.92
Pcdh1-202ENSMUST00000159405 Ndufa11Q9D8B4 141 aa9.28□□□□□ -0.92
Pcdh1-202ENSMUST00000159405 Trav13d-1A0A075B606 110 aa9.28□□□□□ -0.92
Pcdh1-202ENSMUST00000159405 Gm17732E9Q5I2 61 aa9.28□□□□□ -0.92
Pcdh1-202ENSMUST00000159405 Fam19a4Q7TPG5 135 aa9.28□□□□□ -0.92
Pcdh1-202ENSMUST00000159405 Wfdc15bQ9JHY4 80 aa9.28□□□□□ -0.92
Pcdh1-202ENSMUST00000159405 Gm7849D3YX03 116 aa9.28□□□□□ -0.92
Pcdh1-202ENSMUST00000159405 FcorP0DJI6 106 aa9.28□□□□□ -0.92
Pcdh1-202ENSMUST00000159405 Igkv4-74A0A0B4J1I3 119 aa9.27□□□□□ -0.93
Pcdh1-202ENSMUST00000159405 Tmem243B2RVB9 118 aa9.27□□□□□ -0.93
Pcdh1-202ENSMUST00000159405 Q8R092 253 aa9.27□□□□□ -0.93
Pcdh1-202ENSMUST00000159405 Muc5acE9QAQ8 3455 aa9.27□□□□□ -0.93
Pcdh1-202ENSMUST00000159405 OdaphJ3QNT8 126 aa9.27□□□□□ -0.93
Pcdh1-202ENSMUST00000159405 P01747 120 aa9.27□□□□□ -0.93
Pcdh1-202ENSMUST00000159405 CdsnQ7TPC1 561 aa9.27□□□□□ -0.93
Pcdh1-202ENSMUST00000159405 Spag11Q8K4N2 71 aa9.27□□□□□ -0.93
Pcdh1-202ENSMUST00000159405 Igkv4-91A0A075B5L2 119 aa9.27□□□□□ -0.93
Pcdh1-202ENSMUST00000159405 Defb26Q30KN7 186 aa9.27□□□□□ -0.93
Pcdh1-202ENSMUST00000159405 Esm1Q9QYY7 184 aa9.27□□□□□ -0.93
Pcdh1-202ENSMUST00000159405 Gm29666A0A087WQ99 126 aa9.26□□□□□ -0.93
Pcdh1-202ENSMUST00000159405 4930518I15RikQ3V2W7 57 aa9.26□□□□□ -0.93
Pcdh1-202ENSMUST00000159405 Dynlrb2Q9DAJ5 96 aa9.26□□□□□ -0.93
Pcdh1-202ENSMUST00000159405 Hist1h4aP62806 103 aaKnown RBP9.26□□□□□ -0.93
Pcdh1-202ENSMUST00000159405 Msrb2Q78J03 175 aa9.26□□□□□ -0.93
Pcdh1-202ENSMUST00000159405 Fam24aQ8CF27 98 aa9.26□□□□□ -0.93
Pcdh1-202ENSMUST00000159405 Lyzl4Q9D925 145 aa9.26□□□□□ -0.93
Pcdh1-202ENSMUST00000159405 Timm17aQ9Z0V8 171 aa9.26□□□□□ -0.93
Pcdh1-202ENSMUST00000159405 Ubr5Q80TP3 2792 aa9.26□□□□□ -0.93
Pcdh1-202ENSMUST00000159405 C1qcQ02105 246 aa9.26□□□□□ -0.93
Pcdh1-202ENSMUST00000159405 Dnal4Q9DCM4 105 aa9.26□□□□□ -0.93
Pcdh1-202ENSMUST00000159405 Cela2aP05208 271 aa9.25□□□□□ -0.93
Pcdh1-202ENSMUST00000159405 CirbpP60824 172 aaKnown RBP9.25□□□□□ -0.93
Pcdh1-202ENSMUST00000159405 CenpwQ3URR0 86 aa9.25□□□□□ -0.93
Pcdh1-202ENSMUST00000159405 Gm9513B3GLJ6 99 aa9.25□□□□□ -0.93
Pcdh1-202ENSMUST00000159405 Brk1Q91VR8 75 aa9.25□□□□□ -0.93
Pcdh1-202ENSMUST00000159405 Mrpl52Q9D0Y8 121 aa9.25□□□□□ -0.93
Pcdh1-202ENSMUST00000159405 Akap13E9Q394 2776 aa9.25□□□□□ -0.93
Pcdh1-202ENSMUST00000159405 AW146154Q3TPQ7 468 aa9.25□□□□□ -0.93
Pcdh1-202ENSMUST00000159405 Mrpl55Q9CZ83 127 aa9.25□□□□□ -0.93
Pcdh1-202ENSMUST00000159405 Ighv1-52A0A0A6YXC3 117 aa9.24□□□□□ -0.93
Pcdh1-202ENSMUST00000159405 Igkv6-13A0A0G2JGY3 119 aa9.24□□□□□ -0.93
Pcdh1-202ENSMUST00000159405 Defa20Q45VN2 95 aa9.24□□□□□ -0.93
Pcdh1-202ENSMUST00000159405 Ang4Q3TMQ6 144 aa9.24□□□□□ -0.93
Pcdh1-202ENSMUST00000159405 Hbb-b2P02089 147 aa9.24□□□□□ -0.93
Pcdh1-202ENSMUST00000159405 Usp24B1AY13 2617 aaKnown RBP9.24□□□□□ -0.93
Pcdh1-202ENSMUST00000159405 Ighv1-80A0A075B5Y3 117 aa9.23□□□□□ -0.93
Pcdh1-202ENSMUST00000159405 Ighv3-4A0A0A6YXF1 117 aa9.23□□□□□ -0.93
Pcdh1-202ENSMUST00000159405 Igkv4-71A0A0G2JEH0 117 aa9.23□□□□□ -0.93
Pcdh1-202ENSMUST00000159405 Gm9573F7C950 1606 aa9.23□□□□□ -0.93
Pcdh1-202ENSMUST00000159405 H1fxQ80ZM5 188 aa9.23□□□□□ -0.93
Pcdh1-202ENSMUST00000159405 Pgpep1lQ9CWB5 130 aa9.23□□□□□ -0.93
Pcdh1-202ENSMUST00000159405 Cfap126Q6P8X9 189 aa9.23□□□□□ -0.93
Pcdh1-202ENSMUST00000159405 FasnP19096 2504 aaKnown RBP9.22□□□□□ -0.93
Pcdh1-202ENSMUST00000159405 Prelid3aQ8VE85 172 aa9.22□□□□□ -0.93
Pcdh1-202ENSMUST00000159405 RelnQ60841 3461 aa9.22□□□□□ -0.93
Pcdh1-202ENSMUST00000159405 Gcn1E9PVA8 2671 aaKnown RBP9.22□□□□□ -0.93
Retrieved 100 of 22,080 RNA–protein pairs in 97.2 ms