RNA–Protein interactions for RNA: ENSMUST00000087883.12

Col3a1-201, Transcript of Collagen alpha-1(III) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col3a1, Length 5,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1-201ENSMUST00000087883 Rpl18aP62717 176 aaKnown RBP10.67□□□□□ -0.7
Col3a1-201ENSMUST00000087883 E030018B13RikJ3QMS9 113 aa10.67□□□□□ -0.7
Col3a1-201ENSMUST00000087883 B9d2Q3UK10 175 aa10.67□□□□□ -0.7
Col3a1-201ENSMUST00000087883 Gm15557A6PWY0 234 aa10.67□□□□□ -0.7
Col3a1-201ENSMUST00000087883 P01728 117 aa10.67□□□□□ -0.7
Col3a1-201ENSMUST00000087883 Heatr5aQ5PRF0 2038 aa10.66□□□□□ -0.7
Col3a1-201ENSMUST00000087883 Ighv1-11A0A0A6YWI9 117 aa10.66□□□□□ -0.7
Col3a1-201ENSMUST00000087883 Vpreb3D3Z6J4 130 aa10.66□□□□□ -0.7
Col3a1-201ENSMUST00000087883 Cfc1P97766 202 aa10.66□□□□□ -0.7
Col3a1-201ENSMUST00000087883 TncQ80YX1 2110 aa10.66□□□□□ -0.7
Col3a1-201ENSMUST00000087883 Parp4E9PYK3 1969 aa10.66□□□□□ -0.7
Col3a1-201ENSMUST00000087883 Gm12353A2AGJ4 60 aa10.66□□□□□ -0.7
Col3a1-201ENSMUST00000087883 Ndufa4l2Q4FZG9 87 aa10.66□□□□□ -0.7
Col3a1-201ENSMUST00000087883 MyofQ69ZN7 2048 aaKnown RBP10.66□□□□□ -0.7
Col3a1-201ENSMUST00000087883 Vwa8Q8CC88 1905 aa10.66□□□□□ -0.7
Col3a1-201ENSMUST00000087883 P01745 121 aa10.65□□□□□ -0.7
Col3a1-201ENSMUST00000087883 P06328 117 aa10.65□□□□□ -0.7
Col3a1-201ENSMUST00000087883 Fxyd5P97808 178 aa10.65□□□□□ -0.7
Col3a1-201ENSMUST00000087883 Trav9n-4A0A075B631 113 aa10.64□□□□□ -0.71
Col3a1-201ENSMUST00000087883 P84751 237 aa10.64□□□□□ -0.71
Col3a1-201ENSMUST00000087883 Fhl1P97447 280 aaKnown RBP10.64□□□□□ -0.71
Col3a1-201ENSMUST00000087883 AW146154Q3TPQ7 468 aa10.64□□□□□ -0.71
Col3a1-201ENSMUST00000087883 9530003J23RikQ8BM26 151 aa10.64□□□□□ -0.71
Col3a1-201ENSMUST00000087883 PkdrejQ9Z0T6 2126 aa10.64□□□□□ -0.71
Col3a1-201ENSMUST00000087883 Ube2aQ9Z255 152 aa10.63□□□□□ -0.71
Col3a1-201ENSMUST00000087883 Rai1Q61818 1889 aa10.63□□□□□ -0.71
Col3a1-201ENSMUST00000087883 P01747 120 aa10.63□□□□□ -0.71
Col3a1-201ENSMUST00000087883 Gm14137Q8CE97 175 aa10.63□□□□□ -0.71
Col3a1-201ENSMUST00000087883 Pde6gP09174 87 aa10.63□□□□□ -0.71
Col3a1-201ENSMUST00000087883 9130230L23RikQ8CC80 163 aa10.63□□□□□ -0.71
Col3a1-201ENSMUST00000087883 Ighv12-3A0A075B5T1 117 aa10.62□□□□□ -0.71
Col3a1-201ENSMUST00000087883 Zmat4Q8BZ94 229 aa10.62□□□□□ -0.71
Col3a1-201ENSMUST00000087883 Spry4Q9WTP2 300 aa10.62□□□□□ -0.71
Col3a1-201ENSMUST00000087883 1700012A03RikQ9DAF1 130 aa10.62□□□□□ -0.71
Col3a1-201ENSMUST00000087883 Reg3bP35230 175 aa10.61□□□□□ -0.71
Col3a1-201ENSMUST00000087883 Gm10735Q3US96 136 aa10.61□□□□□ -0.71
Col3a1-201ENSMUST00000087883 Pou2af1Q64693 256 aa10.61□□□□□ -0.71
Col3a1-201ENSMUST00000087883 Gm9958Q8C9U4 106 aa10.61□□□□□ -0.71
Col3a1-201ENSMUST00000087883 Pcnx1Q9QYC1 2344 aa10.61□□□□□ -0.71
Col3a1-201ENSMUST00000087883 Sh2d1aO88890 126 aa10.61□□□□□ -0.71
Col3a1-201ENSMUST00000087883 4930470P17RikQ9D542 155 aa10.6□□□□□ -0.71
Col3a1-201ENSMUST00000087883 Ndufc1Q9CQY9 76 aa10.6□□□□□ -0.71
Col3a1-201ENSMUST00000087883 Igkv3-10A0A0G2JGN0 119 aa10.6□□□□□ -0.71
Col3a1-201ENSMUST00000087883 P18527 97 aa10.6□□□□□ -0.71
Col3a1-201ENSMUST00000087883 Tfpi2O35536 230 aa10.6□□□□□ -0.71
Col3a1-201ENSMUST00000087883 Trip12G5E870 2025 aaKnown RBP10.59□□□□□ -0.71
Col3a1-201ENSMUST00000087883 Zfand3Q497H0 227 aa10.59□□□□□ -0.71
Col3a1-201ENSMUST00000087883 Rbx1P62878 108 aa10.59□□□□□ -0.71
Col3a1-201ENSMUST00000087883 Klk9Q32M27 251 aa10.59□□□□□ -0.71
Col3a1-201ENSMUST00000087883 A230072I06RikQ3UUJ8 172 aa10.59□□□□□ -0.71
Col3a1-201ENSMUST00000087883 Ypel4Q65Z93 127 aa10.59□□□□□ -0.71
Col3a1-201ENSMUST00000087883 Gm9913Q8BQQ2 135 aa10.59□□□□□ -0.71
Col3a1-201ENSMUST00000087883 Higd2aQ9CQJ1 106 aa10.59□□□□□ -0.71
Col3a1-201ENSMUST00000087883 Vpreb1P13372 142 aa10.58□□□□□ -0.72
Col3a1-201ENSMUST00000087883 Gm1968Q3T9I3 115 aa10.58□□□□□ -0.72
Col3a1-201ENSMUST00000087883 Prr15lQ8JZM2 100 aa10.58□□□□□ -0.72
Col3a1-201ENSMUST00000087883 CtrlQ9ER05 264 aa10.58□□□□□ -0.72
Col3a1-201ENSMUST00000087883 Sptan1P16546 2472 aaKnown RBP10.58□□□□□ -0.72
Col3a1-201ENSMUST00000087883 Col6a6Q8C6K9 2265 aa10.58□□□□□ -0.72
Col3a1-201ENSMUST00000087883 Gm5878E9PUB3 99 aa10.58□□□□□ -0.72
Col3a1-201ENSMUST00000087883 Gm17521F6QAC8 156 aa10.57□□□□□ -0.72
Col3a1-201ENSMUST00000087883 EnhoQ8K1D8 76 aa10.57□□□□□ -0.72
Col3a1-201ENSMUST00000087883 Igkv4-92A0A0B4J1I2 117 aa10.57□□□□□ -0.72
Col3a1-201ENSMUST00000087883 Ighv1-75A0A075B5Y2 117 aa10.57□□□□□ -0.72
Col3a1-201ENSMUST00000087883 Dopey2Q3UHQ6 2295 aa10.57□□□□□ -0.72
Col3a1-201ENSMUST00000087883 Crybg1A0A0G2JG52 2065 aa10.57□□□□□ -0.72
Col3a1-201ENSMUST00000087883 Edn2P22389 175 aa10.56□□□□□ -0.72
Col3a1-201ENSMUST00000087883 CrygcQ61597 174 aa10.56□□□□□ -0.72
Col3a1-201ENSMUST00000087883 Ptprz1B9EKR1 2312 aa10.56□□□□□ -0.72
Col3a1-201ENSMUST00000087883 Col5a3Q9JLI2 1739 aa10.56□□□□□ -0.72
Col3a1-201ENSMUST00000087883 Col6a4A2AX52 2309 aa10.56□□□□□ -0.72
Col3a1-201ENSMUST00000087883 Jmjd1cQ69ZK6 2350 aa10.55□□□□□ -0.72
Col3a1-201ENSMUST00000087883 Gm5629P06327 117 aa10.55□□□□□ -0.72
Col3a1-201ENSMUST00000087883 Arhgap21Q6DFV3 1944 aa10.55□□□□□ -0.72
Col3a1-201ENSMUST00000087883 Gm10401E9Q3K6 71 aa10.55□□□□□ -0.72
Col3a1-201ENSMUST00000087883 Eif4ebp1Q60876 117 aa10.55□□□□□ -0.72
Col3a1-201ENSMUST00000087883 FcorP0DJI6 106 aa10.55□□□□□ -0.72
Col3a1-201ENSMUST00000087883 Map6d1Q14BB9 191 aa10.55□□□□□ -0.72
Col3a1-201ENSMUST00000087883 Defb18Q30KP5 85 aa10.55□□□□□ -0.72
Col3a1-201ENSMUST00000087883 Odf3Q920N1 254 aa10.55□□□□□ -0.72
Col3a1-201ENSMUST00000087883 Ighv8-5A0A0A6YY60 119 aa10.55□□□□□ -0.72
Col3a1-201ENSMUST00000087883 Rnf152Q8BG47 203 aa10.55□□□□□ -0.72
Col3a1-201ENSMUST00000087883 Wdr38Q9D994 303 aa10.55□□□□□ -0.72
Col3a1-201ENSMUST00000087883 Ly6hQ9WUC3 139 aa10.55□□□□□ -0.72
Col3a1-201ENSMUST00000087883 Ighv1-85A0A075B5Y6 117 aa10.54□□□□□ -0.72
Col3a1-201ENSMUST00000087883 Nsun4C4P6S0 806 aaKnown RBP10.54□□□□□ -0.72
Col3a1-201ENSMUST00000087883 Rnase1P00683 149 aa10.53□□□□□ -0.72
Col3a1-201ENSMUST00000087883 Igf2rQ07113 2483 aaKnown RBP10.53□□□□□ -0.72
Col3a1-201ENSMUST00000087883 Pla2g2aP31482 146 aa10.53□□□□□ -0.72
Col3a1-201ENSMUST00000087883 Ufsp1Q9CZP0 217 aa10.53□□□□□ -0.72
Col3a1-201ENSMUST00000087883 Ube2d4D3YUH6 135 aa10.53□□□□□ -0.72
Col3a1-201ENSMUST00000087883 P01659 112 aa10.53□□□□□ -0.72
Col3a1-201ENSMUST00000087883 BtcQ05928 177 aa10.53□□□□□ -0.72
Col3a1-201ENSMUST00000087883 Arfgef3Q3UGY8 2170 aa10.53□□□□□ -0.72
Col3a1-201ENSMUST00000087883 Sec61gP60060 68 aa10.53□□□□□ -0.72
Col3a1-201ENSMUST00000087883 Ndufs5Q99LY9 106 aa10.53□□□□□ -0.72
Col3a1-201ENSMUST00000087883 9230102O04RikA2ASX7 82 aa10.52□□□□□ -0.72
Col3a1-201ENSMUST00000087883 Wipf1Q8K1I7 493 aa10.52□□□□□ -0.72
Col3a1-201ENSMUST00000087883 Esm1Q9QYY7 184 aa10.52□□□□□ -0.72
Col3a1-201ENSMUST00000087883 Cnot1Q6ZQ08 2375 aaKnown RBP10.52□□□□□ -0.72
Retrieved 100 of 22,080 RNA–protein pairs in 51.6 ms