RNA–Protein interactions for RNA: ENSMUST00000057185.12

Pcdh1-201, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh1, Length 3,902 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-201ENSMUST00000057185 1520401A03RikA0A0J9YVH6 598 aa7.32□□□□□ -1.24
Pcdh1-201ENSMUST00000057185 Srsf2Q62093 221 aaKnown RBP7.32□□□□□ -1.24
Pcdh1-201ENSMUST00000057185 Mapk1ip1lQ8BH93 242 aa7.32□□□□□ -1.24
Pcdh1-201ENSMUST00000057185 Rmi2Q3UPE3 149 aa7.32□□□□□ -1.24
Pcdh1-201ENSMUST00000057185 Reg3gO09049 174 aa7.31□□□□□ -1.24
Pcdh1-201ENSMUST00000057185 Ighv2-7A0A075B5Q8 116 aa7.31□□□□□ -1.24
Pcdh1-201ENSMUST00000057185 Synj2bpQ9D6K5 145 aa7.31□□□□□ -1.24
Pcdh1-201ENSMUST00000057185 LhbO09108 141 aa7.31□□□□□ -1.24
Pcdh1-201ENSMUST00000057185 Zc2hc1bQ9D534 172 aa7.31□□□□□ -1.24
Pcdh1-201ENSMUST00000057185 Muc2Q80Z19 2680 aa7.3□□□□□ -1.24
Pcdh1-201ENSMUST00000057185 Gm9925F6T2U3 160 aa7.3□□□□□ -1.24
Pcdh1-201ENSMUST00000057185 Gm37988J3QM41 62 aa7.3□□□□□ -1.24
Pcdh1-201ENSMUST00000057185 Ss18Q62280 418 aa7.3□□□□□ -1.24
Pcdh1-201ENSMUST00000057185 Trav13d-1A0A075B606 110 aa7.3□□□□□ -1.24
Pcdh1-201ENSMUST00000057185 Defa1P11477 93 aa7.3□□□□□ -1.24
Pcdh1-201ENSMUST00000057185 1500011B03RikQ3TTH7 73 aa7.3□□□□□ -1.24
Pcdh1-201ENSMUST00000057185 Mpv17l2Q8VIK2 200 aa7.3□□□□□ -1.24
Pcdh1-201ENSMUST00000057185 Lyzl4Q9D925 145 aa7.3□□□□□ -1.24
Pcdh1-201ENSMUST00000057185 Zfp462B1AWL2 2495 aaKnown RBP7.3□□□□□ -1.24
Pcdh1-201ENSMUST00000057185 RetnQ99P87 114 aa7.3□□□□□ -1.24
Pcdh1-201ENSMUST00000057185 Gm20499D3Z4G5 72 aa7.29□□□□□ -1.24
Pcdh1-201ENSMUST00000057185 Tcte2E9PY37 120 aa7.29□□□□□ -1.24
Pcdh1-201ENSMUST00000057185 1810032O08RikE9PZV8 113 aa7.29□□□□□ -1.24
Pcdh1-201ENSMUST00000057185 Mrpl35Q9CQL6 188 aa7.29□□□□□ -1.24
Pcdh1-201ENSMUST00000057185 Tspan13Q9D8C2 204 aa7.29□□□□□ -1.24
Pcdh1-201ENSMUST00000057185 Trav9n-2A0A0G2JDP3 113 aa7.29□□□□□ -1.24
Pcdh1-201ENSMUST00000057185 Gm7257D3YX25 99 aa7.29□□□□□ -1.24
Pcdh1-201ENSMUST00000057185 CirbpP60824 172 aaKnown RBP7.29□□□□□ -1.24
Pcdh1-201ENSMUST00000057185 Gm10767Q3TQP0 103 aa7.29□□□□□ -1.24
Pcdh1-201ENSMUST00000057185 Spink13Q3UTS8 97 aa7.29□□□□□ -1.24
Pcdh1-201ENSMUST00000057185 Klk5Q9D140 293 aa7.29□□□□□ -1.24
Pcdh1-201ENSMUST00000057185 Tmem263Q9DAM7 115 aa7.29□□□□□ -1.24
Pcdh1-201ENSMUST00000057185 2310009B15RikA0A0A6YWI4 143 aa7.28□□□□□ -1.24
Pcdh1-201ENSMUST00000057185 Klk1b4P00757 256 aa7.28□□□□□ -1.24
Pcdh1-201ENSMUST00000057185 SrarpQ3ULG3 163 aa7.28□□□□□ -1.24
Pcdh1-201ENSMUST00000057185 Znf740Q6NZQ6 180 aa7.28□□□□□ -1.24
Pcdh1-201ENSMUST00000057185 Sprr3O09116 238 aa7.28□□□□□ -1.24
Pcdh1-201ENSMUST00000057185 Smim1P0C8K7 78 aa7.28□□□□□ -1.24
Pcdh1-201ENSMUST00000057185 PlaurP35456 327 aa7.28□□□□□ -1.24
Pcdh1-201ENSMUST00000057185 4930415O20RikQ8CDT5 131 aa7.28□□□□□ -1.24
Pcdh1-201ENSMUST00000057185 GalmQ8K157 342 aa7.28□□□□□ -1.24
Pcdh1-201ENSMUST00000057185 Gm9195A0A140LHT4 2805 aa7.27□□□□□ -1.24
Pcdh1-201ENSMUST00000057185 Ighv1-52A0A0A6YXC3 117 aa7.27□□□□□ -1.25
Pcdh1-201ENSMUST00000057185 Igkv4-71A0A0G2JEH0 117 aa7.27□□□□□ -1.25
Pcdh1-201ENSMUST00000057185 FcorP0DJI6 106 aa7.27□□□□□ -1.25
Pcdh1-201ENSMUST00000057185 Odf1Q61999 247 aa7.27□□□□□ -1.25
Pcdh1-201ENSMUST00000057185 Gm10295Q8CCF3 114 aa7.27□□□□□ -1.25
Pcdh1-201ENSMUST00000057185 Cox6cQ9CPQ1 76 aa7.27□□□□□ -1.25
Pcdh1-201ENSMUST00000057185 Fam216aQ9DB54 251 aa7.27□□□□□ -1.25
Pcdh1-201ENSMUST00000057185 Igkv4-70A0A0B4J1I5 116 aa7.27□□□□□ -1.25
Pcdh1-201ENSMUST00000057185 Gm815Q3UWS2 115 aa7.27□□□□□ -1.25
Pcdh1-201ENSMUST00000057185 CnfnQ6PCW6 111 aa7.27□□□□□ -1.25
Pcdh1-201ENSMUST00000057185 A530064D06RikQ8BNV8 229 aa7.27□□□□□ -1.25
Pcdh1-201ENSMUST00000057185 Prelid3aQ8VE85 172 aa7.27□□□□□ -1.25
Pcdh1-201ENSMUST00000057185 Rnf183Q8QZS5 190 aa7.27□□□□□ -1.25
Pcdh1-201ENSMUST00000057185 Phpt1Q9DAK9 124 aa7.27□□□□□ -1.25
Pcdh1-201ENSMUST00000057185 Trav4n-4A0A075B615 110 aa7.26□□□□□ -1.25
Pcdh1-201ENSMUST00000057185 Il1f10Q8R459 152 aa7.26□□□□□ -1.25
Pcdh1-201ENSMUST00000057185 Rpl32-psP17932 135 aa7.26□□□□□ -1.25
Pcdh1-201ENSMUST00000057185 Tcrg-C1A0A075B5Z0 172 aa7.26□□□□□ -1.25
Pcdh1-201ENSMUST00000057185 D130052B06RikQ3UW13 202 aa7.26□□□□□ -1.25
Pcdh1-201ENSMUST00000057185 Socs3O35718 225 aa7.25□□□□□ -1.25
Pcdh1-201ENSMUST00000057185 Bles03Q8VD62 251 aa7.25□□□□□ -1.25
Pcdh1-201ENSMUST00000057185 Trbv30A0A0B4J1P1 111 aa7.25□□□□□ -1.25
Pcdh1-201ENSMUST00000057185 LeprotO89013 131 aa7.25□□□□□ -1.25
Pcdh1-201ENSMUST00000057185 SpinklQ8CEK3 90 aa7.25□□□□□ -1.25
Pcdh1-201ENSMUST00000057185 Gm21748Q3UE70 102 aa7.25□□□□□ -1.25
Pcdh1-201ENSMUST00000057185 Gm9913Q8BQQ2 135 aa7.25□□□□□ -1.25
Pcdh1-201ENSMUST00000057185 Ighv1-75A0A075B5Y2 117 aa7.24□□□□□ -1.25
Pcdh1-201ENSMUST00000057185 Defb26Q30KN7 186 aa7.24□□□□□ -1.25
Pcdh1-201ENSMUST00000057185 Ccl24Q9JKC0 119 aa7.24□□□□□ -1.25
Pcdh1-201ENSMUST00000057185 Rpl35aO55142 110 aa7.24□□□□□ -1.25
Pcdh1-201ENSMUST00000057185 Defb18Q30KP5 85 aa7.24□□□□□ -1.25
Pcdh1-201ENSMUST00000057185 Ifi27l2aQ8R412 90 aa7.24□□□□□ -1.25
Pcdh1-201ENSMUST00000057185 FlncQ8VHX6 2726 aaKnown RBP7.24□□□□□ -1.25
Pcdh1-201ENSMUST00000057185 Ighv2-3A0A075B696 115 aa7.24□□□□□ -1.25
Pcdh1-201ENSMUST00000057185 Samd5Q3V1H9 173 aa7.24□□□□□ -1.25
Pcdh1-201ENSMUST00000057185 Cryba4Q9JJV0 196 aa7.24□□□□□ -1.25
Pcdh1-201ENSMUST00000057185 Timm17aQ9Z0V8 171 aa7.24□□□□□ -1.25
Pcdh1-201ENSMUST00000057185 Itpr3P70227 2670 aa7.24□□□□□ -1.25
Pcdh1-201ENSMUST00000057185 Smim10l1A0A087WNQ7 89 aa7.23□□□□□ -1.25
Pcdh1-201ENSMUST00000057185 P01738 130 aa7.23□□□□□ -1.25
Pcdh1-201ENSMUST00000057185 Q9D8Q6 235 aa7.23□□□□□ -1.25
Pcdh1-201ENSMUST00000057185 Akap13E9Q394 2776 aa7.23□□□□□ -1.25
Pcdh1-201ENSMUST00000057185 P01786 117 aa7.23□□□□□ -1.25
Pcdh1-201ENSMUST00000057185 Spink12Q9D256 87 aa7.23□□□□□ -1.25
Pcdh1-201ENSMUST00000057185 Utp20Q5XG71 2788 aaKnown RBP7.23□□□□□ -1.25
Pcdh1-201ENSMUST00000057185 Trav7-6A0A075B640 112 aa7.22□□□□□ -1.25
Pcdh1-201ENSMUST00000057185 Gm7075D3Z497 112 aa7.22□□□□□ -1.25
Pcdh1-201ENSMUST00000057185 Morn5Q9DAI9 170 aa7.22□□□□□ -1.25
Pcdh1-201ENSMUST00000057185 FshbQ60687 130 aa7.22□□□□□ -1.25
Pcdh1-201ENSMUST00000057185 Polr2kQ63871 58 aa7.22□□□□□ -1.25
Pcdh1-201ENSMUST00000057185 Q9DAQ5 155 aa7.22□□□□□ -1.25
Pcdh1-201ENSMUST00000057185 Pfn2Q9JJV2 140 aa7.22□□□□□ -1.25
Pcdh1-201ENSMUST00000057185 Trbv16A0A0B4J1H3 115 aa7.22□□□□□ -1.25
Pcdh1-201ENSMUST00000057185 Trav13n-1A0A0G2JEU8 110 aa7.22□□□□□ -1.25
Pcdh1-201ENSMUST00000057185 Prr9Q8BV84 116 aa7.22□□□□□ -1.25
Pcdh1-201ENSMUST00000057185 Ighv1-49A0A0A6YWX2 117 aa7.21□□□□□ -1.25
Pcdh1-201ENSMUST00000057185 Rbmy1bQ60990 380 aa7.21□□□□□ -1.25
Pcdh1-201ENSMUST00000057185 Tomm7Q9D173 55 aa7.21□□□□□ -1.25
Retrieved 100 of 22,080 RNA–protein pairs in 50.4 ms