RNA–Protein interactions for RNA: ENSMUST00000034776.12

Cln6-201, Transcript of Ceroid-lipofuscinosis, neuronal 6, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cln6, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cln6-201ENSMUST00000034776 Clec4b2Q67DU8 208 aa16.6■□□□□ 0.25
Cln6-201ENSMUST00000034776 Mrpl35Q9CQL6 188 aa16.6■□□□□ 0.25
Cln6-201ENSMUST00000034776 Ndufa1O35683 70 aa16.59■□□□□ 0.25
Cln6-201ENSMUST00000034776 NpsP0C0P8 89 aa16.59■□□□□ 0.25
Cln6-201ENSMUST00000034776 Gata1P17679 413 aa16.59■□□□□ 0.25
Cln6-201ENSMUST00000034776 Morn3Q8C5T4 241 aa16.59■□□□□ 0.25
Cln6-201ENSMUST00000034776 Zcwpw2Q08EN7 125 aa16.58■□□□□ 0.25
Cln6-201ENSMUST00000034776 Gm14137Q8CE97 175 aa16.58■□□□□ 0.25
Cln6-201ENSMUST00000034776 Tex48Q9DA81 110 aa16.58■□□□□ 0.24
Cln6-201ENSMUST00000034776 Defa24Q5G865 93 aa16.57■□□□□ 0.24
Cln6-201ENSMUST00000034776 Tnfrsf23Q9ER63 176 aa16.57■□□□□ 0.24
Cln6-201ENSMUST00000034776 Krtap16-1A2A5X5 502 aa16.57■□□□□ 0.24
Cln6-201ENSMUST00000034776 Rpl35aO55142 110 aa16.57■□□□□ 0.24
Cln6-201ENSMUST00000034776 F11rO88792 300 aa16.57■□□□□ 0.24
Cln6-201ENSMUST00000034776 FcorP0DJI6 106 aa16.57■□□□□ 0.24
Cln6-201ENSMUST00000034776 SbpP15501 199 aa16.57■□□□□ 0.24
Cln6-201ENSMUST00000034776 Timm17aQ9Z0V8 171 aa16.56■□□□□ 0.24
Cln6-201ENSMUST00000034776 March3Q8BRX9 218 aa16.55■□□□□ 0.24
Cln6-201ENSMUST00000034776 Snx22Q8C084 192 aa16.55■□□□□ 0.24
Cln6-201ENSMUST00000034776 Notch3Q61982 2318 aa16.55■□□□□ 0.24
Cln6-201ENSMUST00000034776 Ammecr1lQ8JZZ6 310 aa16.55■□□□□ 0.24
Cln6-201ENSMUST00000034776 Cysltr1Q99JA4 352 aa16.55■□□□□ 0.24
Cln6-201ENSMUST00000034776 CtrlQ9ER05 264 aa16.55■□□□□ 0.24
Cln6-201ENSMUST00000034776 Hspg2Q05793 3707 aaKnown RBP16.54■□□□□ 0.24
Cln6-201ENSMUST00000034776 Bud31Q6PGH1 103 aa16.54■□□□□ 0.24
Cln6-201ENSMUST00000034776 Defa22Q8C1N8 93 aa16.54■□□□□ 0.24
Cln6-201ENSMUST00000034776 Mustn1Q99JI1 82 aa16.54■□□□□ 0.24
Cln6-201ENSMUST00000034776 Ifitm1Q9D103 106 aa16.54■□□□□ 0.24
Cln6-201ENSMUST00000034776 AponG3X9D6 251 aa16.54■□□□□ 0.24
Cln6-201ENSMUST00000034776 Fgf6P21658 208 aa16.54■□□□□ 0.24
Cln6-201ENSMUST00000034776 Q9D727 114 aa16.54■□□□□ 0.24
Cln6-201ENSMUST00000034776 OdaphJ3QNT8 126 aa16.53■□□□□ 0.24
Cln6-201ENSMUST00000034776 Hbb-bsA8DUK4 147 aa16.52■□□□□ 0.24
Cln6-201ENSMUST00000034776 Hbb-b1P02088 147 aa16.52■□□□□ 0.24
Cln6-201ENSMUST00000034776 Igkv4-91A0A075B5L2 119 aa16.52■□□□□ 0.23
Cln6-201ENSMUST00000034776 Ighv1-5A0A0A6YWG2 117 aa16.52■□□□□ 0.23
Cln6-201ENSMUST00000034776 Gm21693J3QK27 380 aa16.52■□□□□ 0.23
Cln6-201ENSMUST00000034776 Gm28044L7N1X0 119 aa16.52■□□□□ 0.23
Cln6-201ENSMUST00000034776 Brd3osA0A1B0GRB6 84 aa16.51■□□□□ 0.23
Cln6-201ENSMUST00000034776 Defa30E9QPZ2 93 aa16.51■□□□□ 0.23
Cln6-201ENSMUST00000034776 Atp5lQ9CPQ8 103 aa16.51■□□□□ 0.23
Cln6-201ENSMUST00000034776 Higd1aQ9JLR9 95 aa16.51■□□□□ 0.23
Cln6-201ENSMUST00000034776 Igkv2-137A0A0B4J1H6 120 aa16.51■□□□□ 0.23
Cln6-201ENSMUST00000034776 BC107364E9Q5A2 140 aa16.51■□□□□ 0.23
Cln6-201ENSMUST00000034776 Tcrg-C3L7N479 172 aa16.51■□□□□ 0.23
Cln6-201ENSMUST00000034776 P01837 106 aa16.51■□□□□ 0.23
Cln6-201ENSMUST00000034776 P03985 172 aa16.51■□□□□ 0.23
Cln6-201ENSMUST00000034776 Hnrnpa3Q8BG05 379 aaKnown RBP16.5■□□□□ 0.23
Cln6-201ENSMUST00000034776 Sec11aQ9R0P6 179 aa16.5■□□□□ 0.23
Cln6-201ENSMUST00000034776 Defa6P50704 93 aa16.49■□□□□ 0.23
Cln6-201ENSMUST00000034776 Chchd7Q8K2Q5 85 aa16.49■□□□□ 0.23
Cln6-201ENSMUST00000034776 Nop10Q9CQS2 64 aa16.49■□□□□ 0.23
Cln6-201ENSMUST00000034776 Trdv5A0A075B661 115 aa16.48■□□□□ 0.23
Cln6-201ENSMUST00000034776 A830031A19RikQ8BNT5 113 aa16.48■□□□□ 0.23
Cln6-201ENSMUST00000034776 P84751 237 aa16.48■□□□□ 0.23
Cln6-201ENSMUST00000034776 Gm1553Q66VB7 94 aa16.48■□□□□ 0.23
Cln6-201ENSMUST00000034776 Pradc1Q9D9N8 188 aa16.46■□□□□ 0.23
Cln6-201ENSMUST00000034776 Itpr2Q9Z329 2701 aa16.46■□□□□ 0.23
Cln6-201ENSMUST00000034776 Fam240aJ3QNP9 97 aa16.46■□□□□ 0.23
Cln6-201ENSMUST00000034776 Q5BN45 167 aa16.46■□□□□ 0.23
Cln6-201ENSMUST00000034776 Vmn1r197Q8R265 298 aa16.46■□□□□ 0.23
Cln6-201ENSMUST00000034776 Fam19a4Q7TPG5 135 aa16.45■□□□□ 0.22
Cln6-201ENSMUST00000034776 Tcrg-C1A0A075B5Z0 172 aa16.45■□□□□ 0.22
Cln6-201ENSMUST00000034776 Gm17472A0A075B683 117 aa16.45■□□□□ 0.22
Cln6-201ENSMUST00000034776 Ighv2-6-8A0A0A6YWY9 116 aa16.45■□□□□ 0.22
Cln6-201ENSMUST00000034776 GfyJ3KML8 504 aa16.45■□□□□ 0.22
Cln6-201ENSMUST00000034776 Trav8-1A0A075B641 109 aa16.43■□□□□ 0.22
Cln6-201ENSMUST00000034776 Smim13E9Q942 88 aa16.43■□□□□ 0.22
Cln6-201ENSMUST00000034776 Cks1brtQ3UNC9 96 aa16.43■□□□□ 0.22
Cln6-201ENSMUST00000034776 Ankrd39Q9D2X0 183 aa16.43■□□□□ 0.22
Cln6-201ENSMUST00000034776 Erg28Q9ERY9 140 aa16.42■□□□□ 0.22
Cln6-201ENSMUST00000034776 Phlda3Q9WV95 125 aa16.42■□□□□ 0.22
Cln6-201ENSMUST00000034776 Gm9887F6RFI0 207 aa16.42■□□□□ 0.22
Cln6-201ENSMUST00000034776 Smim1P0C8K7 78 aa16.41■□□□□ 0.22
Cln6-201ENSMUST00000034776 Wfdc21Q8BTE6 63 aa16.41■□□□□ 0.22
Cln6-201ENSMUST00000034776 PpdpfQ9CR37 115 aa16.41■□□□□ 0.22
Cln6-201ENSMUST00000034776 Ighv1-11A0A0A6YWI9 117 aa16.4■□□□□ 0.22
Cln6-201ENSMUST00000034776 Trav7-2Q5R1I3 112 aa16.4■□□□□ 0.22
Cln6-201ENSMUST00000034776 3110070M22RikQ9DAQ7 118 aa16.4■□□□□ 0.22
Cln6-201ENSMUST00000034776 Igkv4-78A0A0A6YYE5 119 aa16.4■□□□□ 0.22
Cln6-201ENSMUST00000034776 Foxi2Q3I5G5 311 aa16.4■□□□□ 0.22
Cln6-201ENSMUST00000034776 Eif4ebp1Q60876 117 aa16.4■□□□□ 0.22
Cln6-201ENSMUST00000034776 Tal2Q62282 108 aa16.4■□□□□ 0.22
Cln6-201ENSMUST00000034776 Nat8b-psE0CYC6 232 aa16.39■□□□□ 0.21
Cln6-201ENSMUST00000034776 BtcQ05928 177 aa16.39■□□□□ 0.21
Cln6-201ENSMUST00000034776 CrygfQ9CXV3 174 aa16.39■□□□□ 0.21
Cln6-201ENSMUST00000034776 Gm21370Q3T9V6 190 aa16.38■□□□□ 0.21
Cln6-201ENSMUST00000034776 Plac1Q9JI83 173 aa16.38■□□□□ 0.21
Cln6-201ENSMUST00000034776 Esm1Q9QYY7 184 aa16.38■□□□□ 0.21
Cln6-201ENSMUST00000034776 Rpl36aP83882 106 aaKnown RBP16.37■□□□□ 0.21
Cln6-201ENSMUST00000034776 G0s2Q61585 103 aa16.37■□□□□ 0.21
Cln6-201ENSMUST00000034776 Mpv17l2Q8VIK2 200 aa16.37■□□□□ 0.21
Cln6-201ENSMUST00000034776 Gm10295Q8CCF3 114 aa16.36■□□□□ 0.21
Cln6-201ENSMUST00000034776 Klk5Q9D140 293 aa16.36■□□□□ 0.21
Cln6-201ENSMUST00000034776 Gm44965A0A0N4SVR3 59 aa16.36■□□□□ 0.21
Cln6-201ENSMUST00000034776 LeprotO89013 131 aa16.36■□□□□ 0.21
Cln6-201ENSMUST00000034776 Gpha2Q925Q5 128 aa16.36■□□□□ 0.21
Cln6-201ENSMUST00000034776 Ube2d3P61079 147 aa16.35■□□□□ 0.21
Cln6-201ENSMUST00000034776 Ube2d2P62838 147 aa16.35■□□□□ 0.21
Cln6-201ENSMUST00000034776 Tmem97Q8VD00 176 aa16.35■□□□□ 0.21
Retrieved 100 of 22,080 RNA–protein pairs in 77.6 ms