RNA–Protein interactions for RNA: ENSMUST00000028767.8

Rtf1-201, Transcript of RNA polymerase-associated protein RTF1 homolog, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rtf1, Length 4,664 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rtf1-201ENSMUST00000028767 Rnf114Q9ET26 229 aa11.03□□□□□ -0.64
Rtf1-201ENSMUST00000028767 Gm44965A0A0N4SVR3 59 aa11.03□□□□□ -0.64
Rtf1-201ENSMUST00000028767 Spata25Q9DA57 226 aa11.03□□□□□ -0.64
Rtf1-201ENSMUST00000028767 Unc79Q0KK59 2596 aa11.03□□□□□ -0.64
Rtf1-201ENSMUST00000028767 Fgf6P21658 208 aa11.03□□□□□ -0.64
Rtf1-201ENSMUST00000028767 Odf3Q920N1 254 aa11.03□□□□□ -0.64
Rtf1-201ENSMUST00000028767 Socs3O35718 225 aa11.02□□□□□ -0.64
Rtf1-201ENSMUST00000028767 Runx1Q03347 451 aa11.02□□□□□ -0.64
Rtf1-201ENSMUST00000028767 4930470P17RikQ9D542 155 aa11.02□□□□□ -0.64
Rtf1-201ENSMUST00000028767 Ighv1-75A0A075B5Y2 117 aa11.02□□□□□ -0.65
Rtf1-201ENSMUST00000028767 Nop10Q9CQS2 64 aa11.02□□□□□ -0.65
Rtf1-201ENSMUST00000028767 Trbv16A0A0B4J1H3 115 aa11.02□□□□□ -0.65
Rtf1-201ENSMUST00000028767 P01837 106 aa11.02□□□□□ -0.65
Rtf1-201ENSMUST00000028767 Rmi2Q3UPE3 149 aa11.02□□□□□ -0.65
Rtf1-201ENSMUST00000028767 Iglc1A0A0G2JE99 106 aa11.01□□□□□ -0.65
Rtf1-201ENSMUST00000028767 P01843 105 aa11.01□□□□□ -0.65
Rtf1-201ENSMUST00000028767 Gm5629P06327 117 aa11.01□□□□□ -0.65
Rtf1-201ENSMUST00000028767 Prr9Q8BV84 116 aa11.01□□□□□ -0.65
Rtf1-201ENSMUST00000028767 Ucn2Q99ML8 113 aa11.01□□□□□ -0.65
Rtf1-201ENSMUST00000028767 Odf1Q61999 247 aa11.01□□□□□ -0.65
Rtf1-201ENSMUST00000028767 Mpv17l2Q8VIK2 200 aa11.01□□□□□ -0.65
Rtf1-201ENSMUST00000028767 Trav9d-3A0A075B695 113 aa11□□□□□ -0.65
Rtf1-201ENSMUST00000028767 Ccl25O35903 144 aa11□□□□□ -0.65
Rtf1-201ENSMUST00000028767 C920008G01RikA0A0B4J1N1 112 aa11□□□□□ -0.65
Rtf1-201ENSMUST00000028767 Epg5Q80TA9 2572 aa11□□□□□ -0.65
Rtf1-201ENSMUST00000028767 Igkv4-70A0A0B4J1I5 116 aa10.99□□□□□ -0.65
Rtf1-201ENSMUST00000028767 Rnase1P00683 149 aa10.99□□□□□ -0.65
Rtf1-201ENSMUST00000028767 Vwc2lQ505H4 222 aa10.99□□□□□ -0.65
Rtf1-201ENSMUST00000028767 Fam222aQ6PGH4 453 aa10.99□□□□□ -0.65
Rtf1-201ENSMUST00000028767 Fam216aQ9DB54 251 aa10.99□□□□□ -0.65
Rtf1-201ENSMUST00000028767 P84751 237 aa10.98□□□□□ -0.65
Rtf1-201ENSMUST00000028767 Cops9Q3U898 57 aa10.98□□□□□ -0.65
Rtf1-201ENSMUST00000028767 5730522E02RikQ5SP45 163 aa10.98□□□□□ -0.65
Rtf1-201ENSMUST00000028767 A530064D06RikQ8BNV8 229 aa10.98□□□□□ -0.65
Rtf1-201ENSMUST00000028767 Trav4n-4A0A075B615 110 aa10.98□□□□□ -0.65
Rtf1-201ENSMUST00000028767 Trav13d-1A0A075B606 110 aa10.97□□□□□ -0.65
Rtf1-201ENSMUST00000028767 Erdr1J3QMM0 206 aa10.97□□□□□ -0.65
Rtf1-201ENSMUST00000028767 Notch2O35516 2470 aa10.97□□□□□ -0.65
Rtf1-201ENSMUST00000028767 Cyyr1Q8VIH7 165 aa10.97□□□□□ -0.65
Rtf1-201ENSMUST00000028767 Cox7cP17665 63 aa10.97□□□□□ -0.65
Rtf1-201ENSMUST00000028767 Timm17aQ9Z0V8 171 aa10.97□□□□□ -0.65
Rtf1-201ENSMUST00000028767 Mrpl35Q9CQL6 188 aa10.96□□□□□ -0.65
Rtf1-201ENSMUST00000028767 Samd5Q3V1H9 173 aa10.96□□□□□ -0.65
Rtf1-201ENSMUST00000028767 Fam110dQ80X91 271 aa10.96□□□□□ -0.65
Rtf1-201ENSMUST00000028767 LeprotO89013 131 aa10.96□□□□□ -0.66
Rtf1-201ENSMUST00000028767 Anapc13Q8R034 74 aa10.95□□□□□ -0.66
Rtf1-201ENSMUST00000028767 Pfn2Q9JJV2 140 aa10.95□□□□□ -0.66
Rtf1-201ENSMUST00000028767 Hcfc1Q61191 2045 aaKnown RBP10.95□□□□□ -0.66
Rtf1-201ENSMUST00000028767 Ang3P97802 145 aa10.95□□□□□ -0.66
Rtf1-201ENSMUST00000028767 Ifitm1Q9D103 106 aa10.95□□□□□ -0.66
Rtf1-201ENSMUST00000028767 Gcn1E9PVA8 2671 aaKnown RBP10.95□□□□□ -0.66
Rtf1-201ENSMUST00000028767 Gm26602M0QWA4 95 aa10.95□□□□□ -0.66
Rtf1-201ENSMUST00000028767 FcorP0DJI6 106 aa10.95□□□□□ -0.66
Rtf1-201ENSMUST00000028767 4930415O20RikQ8CDT5 131 aa10.95□□□□□ -0.66
Rtf1-201ENSMUST00000028767 Hrct1Q9D6B9 109 aa10.95□□□□□ -0.66
Rtf1-201ENSMUST00000028767 1520401A03RikA0A0J9YVH6 598 aa10.94□□□□□ -0.66
Rtf1-201ENSMUST00000028767 CnfnQ6PCW6 111 aa10.94□□□□□ -0.66
Rtf1-201ENSMUST00000028767 Tcf24V9GWT9 166 aa10.94□□□□□ -0.66
Rtf1-201ENSMUST00000028767 RelnQ60841 3461 aa10.94□□□□□ -0.66
Rtf1-201ENSMUST00000028767 Rpl32-psP17932 135 aa10.94□□□□□ -0.66
Rtf1-201ENSMUST00000028767 Defb47Q30KN1 79 aa10.94□□□□□ -0.66
Rtf1-201ENSMUST00000028767 Ighv3-3A0A0A6YWL2 116 aa10.94□□□□□ -0.66
Rtf1-201ENSMUST00000028767 Triap1Q9D8Z2 76 aa10.94□□□□□ -0.66
Rtf1-201ENSMUST00000028767 Igkv1-99F6XWB2 120 aa10.93□□□□□ -0.66
Rtf1-201ENSMUST00000028767 Znf740Q6NZQ6 180 aa10.93□□□□□ -0.66
Rtf1-201ENSMUST00000028767 Spink10Q8CAC8 162 aa10.93□□□□□ -0.66
Rtf1-201ENSMUST00000028767 Fam240bJ3QMB3 78 aa10.93□□□□□ -0.66
Rtf1-201ENSMUST00000028767 March3Q8BRX9 218 aa10.93□□□□□ -0.66
Rtf1-201ENSMUST00000028767 Fhl2O70433 279 aa10.93□□□□□ -0.66
Rtf1-201ENSMUST00000028767 FshbQ60687 130 aa10.93□□□□□ -0.66
Rtf1-201ENSMUST00000028767 Ankrd11E9Q4F7 2643 aa10.92□□□□□ -0.66
Rtf1-201ENSMUST00000028767 Gm6793B2RXM2 351 aa10.92□□□□□ -0.66
Rtf1-201ENSMUST00000028767 Cox17P56394 63 aa10.92□□□□□ -0.66
Rtf1-201ENSMUST00000028767 Gm10767Q3TQP0 103 aa10.92□□□□□ -0.66
Rtf1-201ENSMUST00000028767 Cox7a1P56392 80 aa10.92□□□□□ -0.66
Rtf1-201ENSMUST00000028767 Vmo1Q5SXG7 201 aa10.92□□□□□ -0.66
Rtf1-201ENSMUST00000028767 SpinklQ8CEK3 90 aa10.92□□□□□ -0.66
Rtf1-201ENSMUST00000028767 Q99M08 65 aa10.92□□□□□ -0.66
Rtf1-201ENSMUST00000028767 CtrlQ9ER05 264 aa10.92□□□□□ -0.66
Rtf1-201ENSMUST00000028767 Prh1P05142 261 aa10.91□□□□□ -0.66
Rtf1-201ENSMUST00000028767 Trav3-1Q5R1I8 114 aa10.91□□□□□ -0.66
Rtf1-201ENSMUST00000028767 ColqO35348 457 aa10.91□□□□□ -0.66
Rtf1-201ENSMUST00000028767 Defa20Q45VN2 95 aa10.91□□□□□ -0.66
Rtf1-201ENSMUST00000028767 Prss58Q8BW11 241 aa10.91□□□□□ -0.66
Rtf1-201ENSMUST00000028767 Gm10295Q8CCF3 114 aa10.91□□□□□ -0.66
Rtf1-201ENSMUST00000028767 Trav9d-4A0A0G2JG37 103 aa10.91□□□□□ -0.66
Rtf1-201ENSMUST00000028767 Clec5aQ9R007 190 aa10.91□□□□□ -0.66
Rtf1-201ENSMUST00000028767 BC048562Q80ZQ7 204 aa10.9□□□□□ -0.66
Rtf1-201ENSMUST00000028767 Gm10542F6XDR3 90 aa10.9□□□□□ -0.66
Rtf1-201ENSMUST00000028767 Pglyrp1O88593 182 aa10.9□□□□□ -0.66
Rtf1-201ENSMUST00000028767 Hectd1Q69ZR2 2618 aaKnown RBP10.9□□□□□ -0.66
Rtf1-201ENSMUST00000028767 Q8R092 253 aa10.89□□□□□ -0.67
Rtf1-201ENSMUST00000028767 Ighv1-66A0A075B5X5 117 aa10.89□□□□□ -0.67
Rtf1-201ENSMUST00000028767 Trav13n-1A0A0G2JEU8 110 aa10.89□□□□□ -0.67
Rtf1-201ENSMUST00000028767 PrlhG3UWC3 86 aa10.88□□□□□ -0.67
Rtf1-201ENSMUST00000028767 Polr2kQ63871 58 aa10.88□□□□□ -0.67
Rtf1-201ENSMUST00000028767 Crlf1Q9JM58 425 aa10.88□□□□□ -0.67
Rtf1-201ENSMUST00000028767 Q9DAB9 146 aa10.88□□□□□ -0.67
Rtf1-201ENSMUST00000028767 Defa1P11477 93 aa10.87□□□□□ -0.67
Rtf1-201ENSMUST00000028767 Psmb8P28063 276 aa10.87□□□□□ -0.67
Retrieved 100 of 22,080 RNA–protein pairs in 68.8 ms