RNA–Protein interactions for RNA: ENSMUST00000023123.14

Col2a1-201, Transcript of Collagen alpha-1(II) chain, mousemouse

TSL 1 (best) BASIC

Gene Col2a1, Length 5,104 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1-201ENSMUST00000023123 Gm10518F6UQQ9 182 aa11.64□□□□□ -0.55
Col2a1-201ENSMUST00000023123 P01659 112 aa11.64□□□□□ -0.55
Col2a1-201ENSMUST00000023123 Gm5878E9PUB3 99 aa11.64□□□□□ -0.55
Col2a1-201ENSMUST00000023123 Igf1P05017 153 aa11.63□□□□□ -0.55
Col2a1-201ENSMUST00000023123 Klk11Q9QYN3 276 aa11.63□□□□□ -0.55
Col2a1-201ENSMUST00000023123 PtprsB0V2N1 1907 aa11.63□□□□□ -0.55
Col2a1-201ENSMUST00000023123 Ighv2-7A0A075B5Q8 116 aa11.63□□□□□ -0.55
Col2a1-201ENSMUST00000023123 Fgf6P21658 208 aa11.63□□□□□ -0.55
Col2a1-201ENSMUST00000023123 Prop1P97458 223 aa11.63□□□□□ -0.55
Col2a1-201ENSMUST00000023123 Gm9958Q8C9U4 106 aa11.63□□□□□ -0.55
Col2a1-201ENSMUST00000023123 Rai1Q61818 1889 aa11.62□□□□□ -0.55
Col2a1-201ENSMUST00000023123 Gm15557A6PWY0 234 aa11.62□□□□□ -0.55
Col2a1-201ENSMUST00000023123 Tm2d2Q8R0I4 213 aa11.62□□□□□ -0.55
Col2a1-201ENSMUST00000023123 Zfand3Q497H0 227 aa11.62□□□□□ -0.55
Col2a1-201ENSMUST00000023123 BikO70337 150 aa11.61□□□□□ -0.55
Col2a1-201ENSMUST00000023123 Rp1l1Q8CGM2 1859 aa11.61□□□□□ -0.55
Col2a1-201ENSMUST00000023123 Cfc1P97766 202 aa11.61□□□□□ -0.55
Col2a1-201ENSMUST00000023123 Fxyd5P97808 178 aa11.61□□□□□ -0.55
Col2a1-201ENSMUST00000023123 Gm17472A0A075B683 117 aa11.61□□□□□ -0.55
Col2a1-201ENSMUST00000023123 Odf3Q920N1 254 aa11.61□□□□□ -0.55
Col2a1-201ENSMUST00000023123 Ighv12-3A0A075B5T1 117 aa11.61□□□□□ -0.55
Col2a1-201ENSMUST00000023123 Pde6gP09174 87 aa11.6□□□□□ -0.55
Col2a1-201ENSMUST00000023123 P06328 117 aa11.6□□□□□ -0.55
Col2a1-201ENSMUST00000023123 Trav13d-4A0A0G2JFX3 110 aa11.6□□□□□ -0.55
Col2a1-201ENSMUST00000023123 Gm10251J3QPM5 127 aa11.6□□□□□ -0.55
Col2a1-201ENSMUST00000023123 Tmem223Q9CQE2 199 aaKnown RBP11.6□□□□□ -0.55
Col2a1-201ENSMUST00000023123 Gm2916Q9D9B9 127 aa11.6□□□□□ -0.55
Col2a1-201ENSMUST00000023123 Q9DAQ5 155 aa11.6□□□□□ -0.55
Col2a1-201ENSMUST00000023123 Dennd4cA6H8H2 1906 aa11.59□□□□□ -0.55
Col2a1-201ENSMUST00000023123 1810032O08RikE9PZV8 113 aa11.59□□□□□ -0.55
Col2a1-201ENSMUST00000023123 Vpreb2P13373 142 aa11.59□□□□□ -0.55
Col2a1-201ENSMUST00000023123 Ube2bP63147 152 aa11.59□□□□□ -0.55
Col2a1-201ENSMUST00000023123 PrcdQ00LT2 53 aa11.59□□□□□ -0.55
Col2a1-201ENSMUST00000023123 AW146154Q3TPQ7 468 aa11.59□□□□□ -0.55
Col2a1-201ENSMUST00000023123 Igkv2-109A0A075B5K6 120 aa11.59□□□□□ -0.55
Col2a1-201ENSMUST00000023123 Igkv1-35A0A0G2JDE5 120 aa11.59□□□□□ -0.55
Col2a1-201ENSMUST00000023123 Arhgef17Q80U35 2057 aa11.59□□□□□ -0.55
Col2a1-201ENSMUST00000023123 Trav13-2A0A075B649 110 aa11.59□□□□□ -0.55
Col2a1-201ENSMUST00000023123 Gm14137Q8CE97 175 aa11.59□□□□□ -0.55
Col2a1-201ENSMUST00000023123 4930546C10RikE9Q4Y3 121 aa11.59□□□□□ -0.55
Col2a1-201ENSMUST00000023123 Trav13n-2A0A0G2JF93 110 aa11.58□□□□□ -0.56
Col2a1-201ENSMUST00000023123 Prh1P05142 261 aa11.58□□□□□ -0.56
Col2a1-201ENSMUST00000023123 Col8a2P25318 699 aa11.58□□□□□ -0.56
Col2a1-201ENSMUST00000023123 Map6d1Q14BB9 191 aa11.58□□□□□ -0.56
Col2a1-201ENSMUST00000023123 Sdk1Q3UH53 2193 aa11.58□□□□□ -0.56
Col2a1-201ENSMUST00000023123 Ighv1-75A0A075B5Y2 117 aa11.57□□□□□ -0.56
Col2a1-201ENSMUST00000023123 Col5a3Q9JLI2 1739 aa11.57□□□□□ -0.56
Col2a1-201ENSMUST00000023123 Igkv8-26A0A075B5N5 123 aa11.57□□□□□ -0.56
Col2a1-201ENSMUST00000023123 Gm10542F6XDR3 90 aa11.57□□□□□ -0.56
Col2a1-201ENSMUST00000023123 Klk12B2RVZ0 247 aa11.56□□□□□ -0.56
Col2a1-201ENSMUST00000023123 Nsun4C4P6S0 806 aaKnown RBP11.56□□□□□ -0.56
Col2a1-201ENSMUST00000023123 Eif4ebp1Q60876 117 aa11.56□□□□□ -0.56
Col2a1-201ENSMUST00000023123 AvpP35455 168 aa11.56□□□□□ -0.56
Col2a1-201ENSMUST00000023123 Eml6Q5SQM0 1958 aa11.56□□□□□ -0.56
Col2a1-201ENSMUST00000023123 Trav13-1A0A075B644 110 aa11.55□□□□□ -0.56
Col2a1-201ENSMUST00000023123 Znf239P24399 201 aa11.55□□□□□ -0.56
Col2a1-201ENSMUST00000023123 P84751 237 aa11.55□□□□□ -0.56
Col2a1-201ENSMUST00000023123 Q9CX25 107 aa11.55□□□□□ -0.56
Col2a1-201ENSMUST00000023123 Cspg4Q8VHY0 2327 aa11.55□□□□□ -0.56
Col2a1-201ENSMUST00000023123 Dscaml1Q4VA61 2053 aa11.55□□□□□ -0.56
Col2a1-201ENSMUST00000023123 Plxnb3Q9QY40 1902 aa11.54□□□□□ -0.56
Col2a1-201ENSMUST00000023123 Gm12353A2AGJ4 60 aa11.54□□□□□ -0.56
Col2a1-201ENSMUST00000023123 Cox7b2Q9D2H1 82 aa11.54□□□□□ -0.56
Col2a1-201ENSMUST00000023123 Ndufc1Q9CQY9 76 aa11.54□□□□□ -0.56
Col2a1-201ENSMUST00000023123 Ighv1-82A0A0G2JEU7 117 aa11.54□□□□□ -0.56
Col2a1-201ENSMUST00000023123 CrygdP04342 174 aa11.54□□□□□ -0.56
Col2a1-201ENSMUST00000023123 Gm5629P06327 117 aa11.54□□□□□ -0.56
Col2a1-201ENSMUST00000023123 Fam222aQ6PGH4 453 aa11.54□□□□□ -0.56
Col2a1-201ENSMUST00000023123 Trav13-4-dv7A0A075B6C2 110 aa11.53□□□□□ -0.56
Col2a1-201ENSMUST00000023123 Piezo1E2JF22 2547 aa11.53□□□□□ -0.56
Col2a1-201ENSMUST00000023123 Camk2n2Q78WH7 79 aa11.53□□□□□ -0.56
Col2a1-201ENSMUST00000023123 Col24a1Q30D77 1733 aa11.53□□□□□ -0.56
Col2a1-201ENSMUST00000023123 TectaO08523 2155 aa11.53□□□□□ -0.56
Col2a1-201ENSMUST00000023123 P18527 97 aa11.53□□□□□ -0.56
Col2a1-201ENSMUST00000023123 Nav2E9Q842 2432 aa11.52□□□□□ -0.56
Col2a1-201ENSMUST00000023123 Pou2af1Q64693 256 aa11.52□□□□□ -0.56
Col2a1-201ENSMUST00000023123 B230359F08RikA0A0B4J1K3 109 aa11.52□□□□□ -0.57
Col2a1-201ENSMUST00000023123 Lypd6Q8BPP5 171 aa11.52□□□□□ -0.57
Col2a1-201ENSMUST00000023123 BtcQ05928 177 aa11.52□□□□□ -0.57
Col2a1-201ENSMUST00000023123 Igkv1-88A0A140T8N1 120 aa11.52□□□□□ -0.57
Col2a1-201ENSMUST00000023123 Ighv1-61P01749 117 aa11.52□□□□□ -0.57
Col2a1-201ENSMUST00000023123 Tet1Q3URK3 2007 aaKnown RBP11.51□□□□□ -0.57
Col2a1-201ENSMUST00000023123 Defb12Q8K4N3 78 aa11.5□□□□□ -0.57
Col2a1-201ENSMUST00000023123 Rnf185Q91YT2 192 aa11.5□□□□□ -0.57
Col2a1-201ENSMUST00000023123 Rpl39lQ9CQD0 51 aa11.5□□□□□ -0.57
Col2a1-201ENSMUST00000023123 Ighv1-85A0A075B5Y6 117 aa11.5□□□□□ -0.57
Col2a1-201ENSMUST00000023123 Ighv8-5A0A0A6YY60 119 aa11.5□□□□□ -0.57
Col2a1-201ENSMUST00000023123 FcorP0DJI6 106 aa11.5□□□□□ -0.57
Col2a1-201ENSMUST00000023123 Ppp1r32Q148A4 427 aa11.49□□□□□ -0.57
Col2a1-201ENSMUST00000023123 Brwd1Q921C3 2304 aa11.49□□□□□ -0.57
Col2a1-201ENSMUST00000023123 Zc2hc1bQ9D534 172 aa11.49□□□□□ -0.57
Col2a1-201ENSMUST00000023123 Wdr38Q9D994 303 aa11.49□□□□□ -0.57
Col2a1-201ENSMUST00000023123 P01747 120 aa11.49□□□□□ -0.57
Col2a1-201ENSMUST00000023123 Ighv8-12A0A0G2JDE1 119 aa11.49□□□□□ -0.57
Col2a1-201ENSMUST00000023123 Klk5Q9D140 293 aa11.49□□□□□ -0.57
Col2a1-201ENSMUST00000023123 Gm37389A0A0A6YW05 95 aa11.48□□□□□ -0.57
Col2a1-201ENSMUST00000023123 Timm17bQ9Z0V7 172 aa11.48□□□□□ -0.57
Col2a1-201ENSMUST00000023123 Wipf1Q8K1I7 493 aa11.48□□□□□ -0.57
Col2a1-201ENSMUST00000023123 4930470P17RikQ9D542 155 aa11.48□□□□□ -0.57
Col2a1-201ENSMUST00000023123 Col4a6B1AVK5 1691 aa11.48□□□□□ -0.57
Retrieved 100 of 22,080 RNA–protein pairs in 43.1 ms