RNA–Protein interactions for RNA: ENSMUST00000005600.5

Rfx1-201, Transcript of MHC class II regulatory factor RFX1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Rfx1, Length 4,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1-201ENSMUST00000005600 Phlda3Q9WV95 125 aa8.96□□□□□ -0.98
Rfx1-201ENSMUST00000005600 Sprr3O09116 238 aa8.95□□□□□ -0.98
Rfx1-201ENSMUST00000005600 Pglyrp1O88593 182 aa8.95□□□□□ -0.98
Rfx1-201ENSMUST00000005600 Defb47Q30KN1 79 aa8.95□□□□□ -0.98
Rfx1-201ENSMUST00000005600 Spg11Q3UHA3 2430 aa8.95□□□□□ -0.98
Rfx1-201ENSMUST00000005600 Srp14P16254 110 aaKnown RBP8.95□□□□□ -0.98
Rfx1-201ENSMUST00000005600 Lgals4Q8K419 326 aa8.95□□□□□ -0.98
Rfx1-201ENSMUST00000005600 Tmem263Q9DAM7 115 aa8.95□□□□□ -0.98
Rfx1-201ENSMUST00000005600 Gm29666A0A087WQ99 126 aa8.95□□□□□ -0.98
Rfx1-201ENSMUST00000005600 GalmQ8K157 342 aa8.95□□□□□ -0.98
Rfx1-201ENSMUST00000005600 Pla2g2aP31482 146 aa8.94□□□□□ -0.98
Rfx1-201ENSMUST00000005600 Fam19a4Q7TPG5 135 aa8.94□□□□□ -0.98
Rfx1-201ENSMUST00000005600 Ccl24Q9JKC0 119 aa8.94□□□□□ -0.98
Rfx1-201ENSMUST00000005600 Ighv1-85A0A075B5Y6 117 aa8.94□□□□□ -0.98
Rfx1-201ENSMUST00000005600 March3Q8BRX9 218 aa8.94□□□□□ -0.98
Rfx1-201ENSMUST00000005600 Dynlrb2Q9DAJ5 96 aa8.94□□□□□ -0.98
Rfx1-201ENSMUST00000005600 2310009B15RikA0A0A6YWI4 143 aa8.94□□□□□ -0.98
Rfx1-201ENSMUST00000005600 Gm10553J3QPF1 123 aa8.94□□□□□ -0.98
Rfx1-201ENSMUST00000005600 Spink12Q9D256 87 aa8.94□□□□□ -0.98
Rfx1-201ENSMUST00000005600 Ighv1-5A0A0A6YWG2 117 aa8.93□□□□□ -0.98
Rfx1-201ENSMUST00000005600 NpwA0A1L1STR8 176 aa8.93□□□□□ -0.98
Rfx1-201ENSMUST00000005600 MsmbO08540 113 aa8.93□□□□□ -0.98
Rfx1-201ENSMUST00000005600 Ankhd1E9PUR0 2548 aaKnown RBP8.93□□□□□ -0.98
Rfx1-201ENSMUST00000005600 A530064D06RikQ8BNV8 229 aa8.93□□□□□ -0.98
Rfx1-201ENSMUST00000005600 Ifi27l2aQ8R412 90 aa8.93□□□□□ -0.98
Rfx1-201ENSMUST00000005600 Q9DAQ5 155 aa8.93□□□□□ -0.98
Rfx1-201ENSMUST00000005600 Adgrg4B7ZCC9 3073 aa8.93□□□□□ -0.98
Rfx1-201ENSMUST00000005600 Smlr1J3QMJ4 66 aa8.93□□□□□ -0.98
Rfx1-201ENSMUST00000005600 Gm21748Q3UE70 102 aa8.93□□□□□ -0.98
Rfx1-201ENSMUST00000005600 Ttc28Q80XJ3 2450 aa8.92□□□□□ -0.98
Rfx1-201ENSMUST00000005600 Gm29423A0A087WRM1 55 aa8.92□□□□□ -0.98
Rfx1-201ENSMUST00000005600 OdaphJ3QNT8 126 aa8.92□□□□□ -0.98
Rfx1-201ENSMUST00000005600 P01753 117 aa8.92□□□□□ -0.98
Rfx1-201ENSMUST00000005600 Ifitm1Q9D103 106 aa8.92□□□□□ -0.98
Rfx1-201ENSMUST00000005600 Cfap126Q6P8X9 189 aa8.91□□□□□ -0.98
Rfx1-201ENSMUST00000005600 Igkv4-62A0A0G2JDW9 117 aa8.91□□□□□ -0.98
Rfx1-201ENSMUST00000005600 Defa2P28309 93 aa8.91□□□□□ -0.98
Rfx1-201ENSMUST00000005600 Pla2g2cP48076 150 aa8.91□□□□□ -0.98
Rfx1-201ENSMUST00000005600 Crip2Q9DCT8 208 aaKnown RBP8.91□□□□□ -0.98
Rfx1-201ENSMUST00000005600 Ighv1-52A0A0A6YXC3 117 aa8.9□□□□□ -0.98
Rfx1-201ENSMUST00000005600 Mfap4Q9D1H9 257 aa8.9□□□□□ -0.98
Rfx1-201ENSMUST00000005600 Znf580Q9DB38 172 aa8.9□□□□□ -0.98
Rfx1-201ENSMUST00000005600 Gm10226O88253 85 aa8.9□□□□□ -0.98
Rfx1-201ENSMUST00000005600 Gm9936Q8C864 160 aa8.9□□□□□ -0.98
Rfx1-201ENSMUST00000005600 Ndufs7Q9DC70 224 aa8.9□□□□□ -0.98
Rfx1-201ENSMUST00000005600 Ighv1-63A0A075B5X2 117 aa8.9□□□□□ -0.99
Rfx1-201ENSMUST00000005600 P04219 140 aa8.9□□□□□ -0.99
Rfx1-201ENSMUST00000005600 Ly86O88188 162 aa8.89□□□□□ -0.99
Rfx1-201ENSMUST00000005600 Smrp1Q2MH31 260 aa8.89□□□□□ -0.99
Rfx1-201ENSMUST00000005600 BB014433Q8C5R5 389 aa8.89□□□□□ -0.99
Rfx1-201ENSMUST00000005600 Igkv4-91A0A075B5L2 119 aa8.89□□□□□ -0.99
Rfx1-201ENSMUST00000005600 Trav9-2A0A075B647 113 aa8.89□□□□□ -0.99
Rfx1-201ENSMUST00000005600 Trav9-4A0A0B4J1K2 113 aa8.89□□□□□ -0.99
Rfx1-201ENSMUST00000005600 Gm10135F6TEE5 83 aa8.89□□□□□ -0.99
Rfx1-201ENSMUST00000005600 Rmi2Q3UPE3 149 aa8.89□□□□□ -0.99
Rfx1-201ENSMUST00000005600 Ighv2-3A0A075B696 115 aa8.89□□□□□ -0.99
Rfx1-201ENSMUST00000005600 Ube2wQ8VDW4 151 aa8.89□□□□□ -0.99
Rfx1-201ENSMUST00000005600 Zc2hc1bQ9D534 172 aa8.89□□□□□ -0.99
Rfx1-201ENSMUST00000005600 OtoglF7A4A7 2325 aa8.88□□□□□ -0.99
Rfx1-201ENSMUST00000005600 Cox6cQ9CPQ1 76 aa8.88□□□□□ -0.99
Rfx1-201ENSMUST00000005600 Ighv2-7A0A075B5Q8 116 aa8.88□□□□□ -0.99
Rfx1-201ENSMUST00000005600 Gm20730A0A075B5J6 119 aa8.87□□□□□ -0.99
Rfx1-201ENSMUST00000005600 PlaurP35456 327 aa8.87□□□□□ -0.99
Rfx1-201ENSMUST00000005600 Prelid3aQ8VE85 172 aa8.87□□□□□ -0.99
Rfx1-201ENSMUST00000005600 Lrrk2Q5S006 2527 aa8.87□□□□□ -0.99
Rfx1-201ENSMUST00000005600 HampQ9EQ21 83 aa8.87□□□□□ -0.99
Rfx1-201ENSMUST00000005600 Myo9aQ8C170 2542 aa8.87□□□□□ -0.99
Rfx1-201ENSMUST00000005600 Krtap26-1Q9D7N2 215 aa8.87□□□□□ -0.99
Rfx1-201ENSMUST00000005600 1810032O08RikE9PZV8 113 aa8.87□□□□□ -0.99
Rfx1-201ENSMUST00000005600 Gm10251J3QPM5 127 aa8.87□□□□□ -0.99
Rfx1-201ENSMUST00000005600 Synj2bpQ9D6K5 145 aa8.87□□□□□ -0.99
Rfx1-201ENSMUST00000005600 P84751 237 aa8.86□□□□□ -0.99
Rfx1-201ENSMUST00000005600 Gm10767Q3TQP0 103 aa8.86□□□□□ -0.99
Rfx1-201ENSMUST00000005600 Trav3-4A0A075B654 114 aa8.86□□□□□ -0.99
Rfx1-201ENSMUST00000005600 Ighv2-6-8A0A0A6YWY9 116 aa8.86□□□□□ -0.99
Rfx1-201ENSMUST00000005600 Defa1P11477 93 aa8.86□□□□□ -0.99
Rfx1-201ENSMUST00000005600 4930415O20RikQ8CDT5 131 aa8.86□□□□□ -0.99
Rfx1-201ENSMUST00000005600 Wnk1P83741 2377 aa8.86□□□□□ -0.99
Rfx1-201ENSMUST00000005600 Rbmy1bQ60990 380 aa8.85□□□□□ -0.99
Rfx1-201ENSMUST00000005600 Fam216aQ9DB54 251 aa8.85□□□□□ -0.99
Rfx1-201ENSMUST00000005600 Gm11020F6ZGD5 61 aa8.85□□□□□ -0.99
Rfx1-201ENSMUST00000005600 Lrcol1Q3URS3 161 aa8.85□□□□□ -0.99
Rfx1-201ENSMUST00000005600 Wfdc15aQ8BH89 80 aa8.85□□□□□ -0.99
Rfx1-201ENSMUST00000005600 Ighv5-9-1A0A0A6YVS4 126 aa8.85□□□□□ -0.99
Rfx1-201ENSMUST00000005600 Gm37988J3QM41 62 aa8.85□□□□□ -0.99
Rfx1-201ENSMUST00000005600 Atp5g3P56384 141 aa8.85□□□□□ -0.99
Rfx1-201ENSMUST00000005600 Tmem213Q08EA8 116 aa8.85□□□□□ -0.99
Rfx1-201ENSMUST00000005600 4930442H23RikQ9D5G7 103 aa8.85□□□□□ -0.99
Rfx1-201ENSMUST00000005600 Ighv1-58A0A075B5W9 117 aa8.84□□□□□ -0.99
Rfx1-201ENSMUST00000005600 Cyyr1Q8VIH7 165 aa8.84□□□□□ -0.99
Rfx1-201ENSMUST00000005600 Trav7-6A0A075B640 112 aa8.84□□□□□ -0.99
Rfx1-201ENSMUST00000005600 Glrp1E9Q9S8 174 aa8.84□□□□□ -0.99
Rfx1-201ENSMUST00000005600 Bri3P28662 125 aa8.84□□□□□ -0.99
Rfx1-201ENSMUST00000005600 Krtap27-1E9PX37 202 aa8.83□□□□□ -1
Rfx1-201ENSMUST00000005600 P06329 120 aa8.83□□□□□ -1
Rfx1-201ENSMUST00000005600 Gm17455G3UW87 128 aa8.83□□□□□ -1
Rfx1-201ENSMUST00000005600 CirbpP60824 172 aaKnown RBP8.83□□□□□ -1
Rfx1-201ENSMUST00000005600 H1fxQ80ZM5 188 aa8.83□□□□□ -1
Rfx1-201ENSMUST00000005600 Il19Q8CJ70 176 aa8.83□□□□□ -1
Rfx1-201ENSMUST00000005600 Trav13d-1A0A075B606 110 aa8.83□□□□□ -1
Retrieved 100 of 22,080 RNA–protein pairs in 46.7 ms