RNA–Protein interactions for RNA: ENSMUST00000136980.7

Prpf40b-208, Transcript of Pre-mRNA-processing factor 40 homolog B, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Prpf40b, Length 3,047 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40b-208ENSMUST00000136980 Gm11444F6QMA6 170 aa8.7□□□□□ -1.02
Prpf40b-208ENSMUST00000136980 Fam240aJ3QNP9 97 aa8.7□□□□□ -1.02
Prpf40b-208ENSMUST00000136980 Fhl1P97447 280 aaKnown RBP8.7□□□□□ -1.02
Prpf40b-208ENSMUST00000136980 Olfr553Q7TRS6 326 aa8.7□□□□□ -1.02
Prpf40b-208ENSMUST00000136980 Plac1Q9JI83 173 aa8.7□□□□□ -1.02
Prpf40b-208ENSMUST00000136980 Gm26938S4R185 226 aa8.7□□□□□ -1.02
Prpf40b-208ENSMUST00000136980 F11rO88792 300 aa8.7□□□□□ -1.02
Prpf40b-208ENSMUST00000136980 S100a4P07091 101 aa8.7□□□□□ -1.02
Prpf40b-208ENSMUST00000136980 Psmg4P0C7N9 123 aa8.7□□□□□ -1.02
Prpf40b-208ENSMUST00000136980 Il1f10Q8R459 152 aa8.7□□□□□ -1.02
Prpf40b-208ENSMUST00000136980 Fam208bQ5DTT3 2382 aa8.7□□□□□ -1.02
Prpf40b-208ENSMUST00000136980 Amn1B8JKV0 258 aa8.7□□□□□ -1.02
Prpf40b-208ENSMUST00000136980 H2al1aQ5M8Q2 105 aa8.7□□□□□ -1.02
Prpf40b-208ENSMUST00000136980 Tmem89Q9DA04 169 aa8.7□□□□□ -1.02
Prpf40b-208ENSMUST00000136980 Ly6lH3BJG9 140 aa8.69□□□□□ -1.02
Prpf40b-208ENSMUST00000136980 P06329 120 aa8.69□□□□□ -1.02
Prpf40b-208ENSMUST00000136980 P06334 169 aa8.69□□□□□ -1.02
Prpf40b-208ENSMUST00000136980 A730015C16RikQ8C992 119 aa8.69□□□□□ -1.02
Prpf40b-208ENSMUST00000136980 Ighv1-23A0A0A6YVW3 117 aa8.69□□□□□ -1.02
Prpf40b-208ENSMUST00000136980 1700056E22RikF7CNM6 234 aa8.69□□□□□ -1.02
Prpf40b-208ENSMUST00000136980 Gm5294J3QP53 216 aa8.69□□□□□ -1.02
Prpf40b-208ENSMUST00000136980 Gata1P17679 413 aa8.69□□□□□ -1.02
Prpf40b-208ENSMUST00000136980 Rpl32-psP17932 135 aa8.69□□□□□ -1.02
Prpf40b-208ENSMUST00000136980 Rps28P62858 69 aaKnown RBP8.69□□□□□ -1.02
Prpf40b-208ENSMUST00000136980 Atp6v0e1Q9CQD8 81 aa8.69□□□□□ -1.02
Prpf40b-208ENSMUST00000136980 Stpg1Q9D2F5 341 aa8.69□□□□□ -1.02
Prpf40b-208ENSMUST00000136980 SrarpQ3ULG3 163 aa8.68□□□□□ -1.02
Prpf40b-208ENSMUST00000136980 Defa23Q5G866 93 aa8.68□□□□□ -1.02
Prpf40b-208ENSMUST00000136980 Mrpl36Q99N90 102 aa8.68□□□□□ -1.02
Prpf40b-208ENSMUST00000136980 P01725 110 aa8.68□□□□□ -1.02
Prpf40b-208ENSMUST00000136980 Rpl11Q9CXW4 178 aaKnown RBP8.68□□□□□ -1.02
Prpf40b-208ENSMUST00000136980 Rab37Q9JKM7 223 aa8.68□□□□□ -1.02
Prpf40b-208ENSMUST00000136980 Mrps12O35680 139 aa8.67□□□□□ -1.02
Prpf40b-208ENSMUST00000136980 Ang5Q5GAN1 145 aa8.67□□□□□ -1.02
Prpf40b-208ENSMUST00000136980 CnfnQ6PCW6 111 aa8.67□□□□□ -1.02
Prpf40b-208ENSMUST00000136980 Rasl11bQ922H7 247 aa8.67□□□□□ -1.02
Prpf40b-208ENSMUST00000136980 Ube2d1P61080 147 aaKnown RBP8.67□□□□□ -1.02
Prpf40b-208ENSMUST00000136980 Sumo2P61957 95 aaKnown RBP8.67□□□□□ -1.02
Prpf40b-208ENSMUST00000136980 Sdhaf1Q3U276 118 aa8.67□□□□□ -1.02
Prpf40b-208ENSMUST00000136980 Nbl1Q61477 178 aa8.67□□□□□ -1.02
Prpf40b-208ENSMUST00000136980 Igkv4-57A0A0A6YYE7 117 aa8.67□□□□□ -1.02
Prpf40b-208ENSMUST00000136980 Gm10271F6WY25 52 aa8.67□□□□□ -1.02
Prpf40b-208ENSMUST00000136980 P01837 106 aa8.67□□□□□ -1.02
Prpf40b-208ENSMUST00000136980 LoxP28301 411 aa8.67□□□□□ -1.02
Prpf40b-208ENSMUST00000136980 Rpl39P62892 51 aa8.67□□□□□ -1.02
Prpf40b-208ENSMUST00000136980 Gemin7Q9CWY4 129 aa8.67□□□□□ -1.02
Prpf40b-208ENSMUST00000136980 Zc2hc1bQ9D534 172 aa8.67□□□□□ -1.02
Prpf40b-208ENSMUST00000136980 SbsponQ3UPR9 264 aa8.66□□□□□ -1.02
Prpf40b-208ENSMUST00000136980 Tac4Q99N14 128 aa8.66□□□□□ -1.02
Prpf40b-208ENSMUST00000136980 SNORCQ9CXL7 121 aa8.66□□□□□ -1.02
Prpf40b-208ENSMUST00000136980 Cspg4Q8VHY0 2327 aa8.66□□□□□ -1.02
Prpf40b-208ENSMUST00000136980 OtoglF7A4A7 2325 aa8.66□□□□□ -1.02
Prpf40b-208ENSMUST00000136980 Ighv3-8A0A075B5T0 131 aa8.66□□□□□ -1.02
Prpf40b-208ENSMUST00000136980 Tex26Q0VB26 296 aa8.66□□□□□ -1.02
Prpf40b-208ENSMUST00000136980 Defb45Q3V490 66 aa8.66□□□□□ -1.02
Prpf40b-208ENSMUST00000136980 Gm1553Q66VB7 94 aa8.66□□□□□ -1.02
Prpf40b-208ENSMUST00000136980 Obox8V9GWY9 217 aa8.66□□□□□ -1.02
Prpf40b-208ENSMUST00000136980 Gm9195A0A140LHT4 2805 aa8.66□□□□□ -1.02
Prpf40b-208ENSMUST00000136980 Sptbn4E9PX29 2561 aa8.66□□□□□ -1.02
Prpf40b-208ENSMUST00000136980 Igkv4-59A0A0B4J1I8 117 aa8.65□□□□□ -1.02
Prpf40b-208ENSMUST00000136980 Igkv20-101-2A0A0G2JDU3 113 aa8.65□□□□□ -1.02
Prpf40b-208ENSMUST00000136980 4930447F04RikA2AFR2 126 aa8.65□□□□□ -1.02
Prpf40b-208ENSMUST00000136980 Casp6O08738 276 aa8.65□□□□□ -1.02
Prpf40b-208ENSMUST00000136980 Egr1P08046 533 aa8.65□□□□□ -1.02
Prpf40b-208ENSMUST00000136980 Cdx4Q07424 282 aa8.65□□□□□ -1.02
Prpf40b-208ENSMUST00000136980 Tcf15Q60756 195 aa8.65□□□□□ -1.02
Prpf40b-208ENSMUST00000136980 Minos1Q7TNS2 76 aa8.65□□□□□ -1.02
Prpf40b-208ENSMUST00000136980 HampQ9EQ21 83 aa8.65□□□□□ -1.02
Prpf40b-208ENSMUST00000136980 Igkv4-71A0A0G2JEH0 117 aa8.65□□□□□ -1.02
Prpf40b-208ENSMUST00000136980 P01747 120 aa8.65□□□□□ -1.02
Prpf40b-208ENSMUST00000136980 4930432M17RikQ3V0W9 174 aa8.65□□□□□ -1.02
Prpf40b-208ENSMUST00000136980 Triap1Q9D8Z2 76 aa8.65□□□□□ -1.02
Prpf40b-208ENSMUST00000136980 Hoxd3P09027 433 aa8.64□□□□□ -1.03
Prpf40b-208ENSMUST00000136980 AW146154Q3TPQ7 468 aa8.64□□□□□ -1.03
Prpf40b-208ENSMUST00000136980 Trav7d-3Q5R1I1 112 aa8.64□□□□□ -1.03
Prpf40b-208ENSMUST00000136980 Ss18Q62280 418 aa8.64□□□□□ -1.03
Prpf40b-208ENSMUST00000136980 Ndufa4Q62425 82 aaKnown RBP8.64□□□□□ -1.03
Prpf40b-208ENSMUST00000136980 Ubr5Q80TP3 2792 aa8.64□□□□□ -1.03
Prpf40b-208ENSMUST00000136980 Ccl19O70460 108 aa8.64□□□□□ -1.03
Prpf40b-208ENSMUST00000136980 Foxi2Q3I5G5 311 aa8.64□□□□□ -1.03
Prpf40b-208ENSMUST00000136980 Q4KKZ1 196 aa8.64□□□□□ -1.03
Prpf40b-208ENSMUST00000136980 Olfr313Q5NC55 308 aa8.64□□□□□ -1.03
Prpf40b-208ENSMUST00000136980 Ube2wQ8VDW4 151 aa8.64□□□□□ -1.03
Prpf40b-208ENSMUST00000136980 CenpwQ3URR0 86 aa8.64□□□□□ -1.03
Prpf40b-208ENSMUST00000136980 Spata46Q4FZF2 204 aa8.64□□□□□ -1.03
Prpf40b-208ENSMUST00000136980 NbeaQ9EPN1 2936 aa8.64□□□□□ -1.03
Prpf40b-208ENSMUST00000136980 Defb30Q30KN4 75 aa8.63□□□□□ -1.03
Prpf40b-208ENSMUST00000136980 Cyyr1Q8VIH7 165 aa8.63□□□□□ -1.03
Prpf40b-208ENSMUST00000136980 P01643 108 aa8.63□□□□□ -1.03
Prpf40b-208ENSMUST00000136980 Ucn2Q99ML8 113 aa8.63□□□□□ -1.03
Prpf40b-208ENSMUST00000136980 Gm5629P06327 117 aa8.62□□□□□ -1.03
Prpf40b-208ENSMUST00000136980 A130051J06RikQ8CAU1 227 aa8.62□□□□□ -1.03
Prpf40b-208ENSMUST00000136980 P01812 117 aa8.62□□□□□ -1.03
Prpf40b-208ENSMUST00000136980 TtrP07309 147 aa8.62□□□□□ -1.03
Prpf40b-208ENSMUST00000136980 Pip4p1Q3TWL2 284 aa8.62□□□□□ -1.03
Prpf40b-208ENSMUST00000136980 Zfp248Q640N4 576 aa8.62□□□□□ -1.03
Prpf40b-208ENSMUST00000136980 Atp5g3P56384 141 aa8.62□□□□□ -1.03
Prpf40b-208ENSMUST00000136980 Rnf152Q8BG47 203 aa8.62□□□□□ -1.03
Prpf40b-208ENSMUST00000136980 E130116L18RikQ8BMV6 101 aa8.62□□□□□ -1.03
Prpf40b-208ENSMUST00000136980 Ormdl2Q9CQZ0 153 aa8.62□□□□□ -1.03
Retrieved 100 of 22,080 RNA–protein pairs in 36.6 ms