RNA–Protein interactions for RNA: ENSMUST00000113388.2

Chm-202, Transcript of Rab proteins geranylgeranyltransferase component A 1, mousemouse

TSL 1 (best) BASIC

Gene Chm, Length 4,749 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chm-202ENSMUST00000113388 Csmd1Q923L3 3564 aa5.59□□□□□ -1.51
Chm-202ENSMUST00000113388 Trav4-4-dv10A0A075B651 110 aa5.59□□□□□ -1.51
Chm-202ENSMUST00000113388 Gm10521E9PZK0 135 aa5.59□□□□□ -1.51
Chm-202ENSMUST00000113388 Foxf2O54743 446 aa5.59□□□□□ -1.51
Chm-202ENSMUST00000113388 P04946 108 aa5.59□□□□□ -1.51
Chm-202ENSMUST00000113388 Timm21Q8CCM6 249 aa5.59□□□□□ -1.51
Chm-202ENSMUST00000113388 Gm33815A0A087WNV3 176 aa5.59□□□□□ -1.51
Chm-202ENSMUST00000113388 Gm42674D3YUT9 64 aa5.59□□□□□ -1.51
Chm-202ENSMUST00000113388 Gm10192Q3V0S1 108 aa5.59□□□□□ -1.51
Chm-202ENSMUST00000113388 Cfap126Q6P8X9 189 aa5.59□□□□□ -1.51
Chm-202ENSMUST00000113388 Igkv4-80A0A075B5L7 116 aa5.59□□□□□ -1.52
Chm-202ENSMUST00000113388 Gm11213A0A1B0GR83 88 aa5.59□□□□□ -1.52
Chm-202ENSMUST00000113388 P01783 136 aa5.59□□□□□ -1.52
Chm-202ENSMUST00000113388 Tmem254aP0DN89 123 aa5.59□□□□□ -1.52
Chm-202ENSMUST00000113388 Tmem254bP0DN90 123 aa5.59□□□□□ -1.52
Chm-202ENSMUST00000113388 Tmem254cP0DN91 123 aa5.59□□□□□ -1.52
Chm-202ENSMUST00000113388 Pla2g2cP48076 150 aa5.59□□□□□ -1.52
Chm-202ENSMUST00000113388 Ttc28Q80XJ3 2450 aa5.59□□□□□ -1.52
Chm-202ENSMUST00000113388 Ankhd1E9PUR0 2548 aaKnown RBP5.58□□□□□ -1.52
Chm-202ENSMUST00000113388 Rnase2bO35292 155 aa5.58□□□□□ -1.52
Chm-202ENSMUST00000113388 Cd59aO55186 123 aa5.58□□□□□ -1.52
Chm-202ENSMUST00000113388 Sh2d1aO88890 126 aa5.58□□□□□ -1.52
Chm-202ENSMUST00000113388 Spry2Q9QXV8 315 aa5.58□□□□□ -1.52
Chm-202ENSMUST00000113388 Nav2E9Q842 2432 aa5.58□□□□□ -1.52
Chm-202ENSMUST00000113388 1520401A03RikA0A0J9YVH6 598 aa5.58□□□□□ -1.52
Chm-202ENSMUST00000113388 Ifitm6A0A1B0GS75 124 aa5.58□□□□□ -1.52
Chm-202ENSMUST00000113388 Ndufa11Q9D8B4 141 aa5.58□□□□□ -1.52
Chm-202ENSMUST00000113388 Arhgap21Q6DFV3 1944 aa5.58□□□□□ -1.52
Chm-202ENSMUST00000113388 Zfp648D3Z0W3 525 aa5.58□□□□□ -1.52
Chm-202ENSMUST00000113388 A530064D06RikQ8BNV8 229 aa5.58□□□□□ -1.52
Chm-202ENSMUST00000113388 Hils1Q9QYL0 170 aa5.58□□□□□ -1.52
Chm-202ENSMUST00000113388 Klk11Q9QYN3 276 aa5.58□□□□□ -1.52
Chm-202ENSMUST00000113388 Ighv1-76A0A0G2JFE9 117 aa5.57□□□□□ -1.52
Chm-202ENSMUST00000113388 4930415O20RikQ8CDT5 131 aa5.57□□□□□ -1.52
Chm-202ENSMUST00000113388 Tmem223Q9CQE2 199 aaKnown RBP5.57□□□□□ -1.52
Chm-202ENSMUST00000113388 Dscaml1Q4VA61 2053 aa5.57□□□□□ -1.52
Chm-202ENSMUST00000113388 Trav6-4A0A075B6B4 115 aa5.57□□□□□ -1.52
Chm-202ENSMUST00000113388 Ighv1-20A0A0A6YX66 117 aa5.57□□□□□ -1.52
Chm-202ENSMUST00000113388 Gm21974F6W3F3 119 aa5.57□□□□□ -1.52
Chm-202ENSMUST00000113388 D430019H16RikJ3QPM6 83 aa5.57□□□□□ -1.52
Chm-202ENSMUST00000113388 LoxP28301 411 aa5.57□□□□□ -1.52
Chm-202ENSMUST00000113388 Mrpl33Q9CQP0 65 aa5.57□□□□□ -1.52
Chm-202ENSMUST00000113388 Dock9Q8BIK4 2055 aa5.57□□□□□ -1.52
Chm-202ENSMUST00000113388 Usp9xP70398 2559 aaKnown RBP5.57□□□□□ -1.52
Chm-202ENSMUST00000113388 Ighv1-54A0A075B5W5 117 aa5.57□□□□□ -1.52
Chm-202ENSMUST00000113388 A0A1Y7VLU2 103 aa5.57□□□□□ -1.52
Chm-202ENSMUST00000113388 AW146154Q3TPQ7 468 aa5.57□□□□□ -1.52
Chm-202ENSMUST00000113388 Tff3Q62395 81 aa5.57□□□□□ -1.52
Chm-202ENSMUST00000113388 Gm17334Q8C6U3 126 aa5.57□□□□□ -1.52
Chm-202ENSMUST00000113388 Ndufb3Q9CQZ6 104 aa5.57□□□□□ -1.52
Chm-202ENSMUST00000113388 Gkn1Q9CR36 201 aa5.57□□□□□ -1.52
Chm-202ENSMUST00000113388 Triap1Q9D8Z2 76 aa5.57□□□□□ -1.52
Chm-202ENSMUST00000113388 E030025P04RikA2A6V5 185 aa5.57□□□□□ -1.52
Chm-202ENSMUST00000113388 Spint4Q9D263 159 aa5.57□□□□□ -1.52
Chm-202ENSMUST00000113388 Ighv5-12-4A0A0A6YWG4 117 aa5.56□□□□□ -1.52
Chm-202ENSMUST00000113388 P01658 132 aa5.56□□□□□ -1.52
Chm-202ENSMUST00000113388 Foxi2Q3I5G5 311 aa5.56□□□□□ -1.52
Chm-202ENSMUST00000113388 Znf691Q3TDE8 283 aa5.56□□□□□ -1.52
Chm-202ENSMUST00000113388 1500011B03RikQ3TTH7 73 aa5.56□□□□□ -1.52
Chm-202ENSMUST00000113388 Higd1aQ9JLR9 95 aa5.56□□□□□ -1.52
Chm-202ENSMUST00000113388 Eml6Q5SQM0 1958 aa5.56□□□□□ -1.52
Chm-202ENSMUST00000113388 Ighv1-34A0A075B5V2 117 aa5.56□□□□□ -1.52
Chm-202ENSMUST00000113388 Igkv2-137A0A0B4J1H6 120 aa5.56□□□□□ -1.52
Chm-202ENSMUST00000113388 P01792 123 aa5.56□□□□□ -1.52
Chm-202ENSMUST00000113388 P18527 97 aa5.56□□□□□ -1.52
Chm-202ENSMUST00000113388 Cd24P24807 76 aa5.56□□□□□ -1.52
Chm-202ENSMUST00000113388 Smr3aQ61900 147 aa5.56□□□□□ -1.52
Chm-202ENSMUST00000113388 4933414I15RikQ9D4D5 133 aa5.56□□□□□ -1.52
Chm-202ENSMUST00000113388 Trav6d-3A0A075B6B3 112 aa5.56□□□□□ -1.52
Chm-202ENSMUST00000113388 Tcte2E9PY37 120 aa5.56□□□□□ -1.52
Chm-202ENSMUST00000113388 P04940 107 aa5.56□□□□□ -1.52
Chm-202ENSMUST00000113388 P04942 107 aa5.56□□□□□ -1.52
Chm-202ENSMUST00000113388 C1qcQ02105 246 aa5.56□□□□□ -1.52
Chm-202ENSMUST00000113388 A530084C06RikQ3UTW2 186 aa5.56□□□□□ -1.52
Chm-202ENSMUST00000113388 Trav6-3Q5R1E6 112 aa5.56□□□□□ -1.52
Chm-202ENSMUST00000113388 Fxyd3Q61835 88 aa5.56□□□□□ -1.52
Chm-202ENSMUST00000113388 Crlf1Q9JM58 425 aa5.56□□□□□ -1.52
Chm-202ENSMUST00000113388 Myo9bQ9QY06 2114 aa5.55□□□□□ -1.52
Chm-202ENSMUST00000113388 Igh-VJ558P01758 117 aa5.55□□□□□ -1.52
Chm-202ENSMUST00000113388 4930556J24RikQ9D4U7 146 aa5.55□□□□□ -1.52
Chm-202ENSMUST00000113388 Wdr31Q9JHB4 367 aa5.55□□□□□ -1.52
Chm-202ENSMUST00000113388 Heatr5aQ5PRF0 2038 aa5.55□□□□□ -1.52
Chm-202ENSMUST00000113388 Gm10036E9PYL9 178 aaKnown RBP5.55□□□□□ -1.52
Chm-202ENSMUST00000113388 AngP21570 145 aa5.55□□□□□ -1.52
Chm-202ENSMUST00000113388 Lage3Q9CR70 148 aa5.55□□□□□ -1.52
Chm-202ENSMUST00000113388 Dido1Q8C9B9 2256 aaKnown RBP5.55□□□□□ -1.52
Chm-202ENSMUST00000113388 Igkv19-93A0A0G2JFZ3 115 aa5.55□□□□□ -1.52
Chm-202ENSMUST00000113388 Gm5093E9PZB3 174 aa5.55□□□□□ -1.52
Chm-202ENSMUST00000113388 Gm5153P01627 120 aa5.55□□□□□ -1.52
Chm-202ENSMUST00000113388 SelenowP63300 88 aa5.55□□□□□ -1.52
Chm-202ENSMUST00000113388 Tm2d2Q8R0I4 213 aa5.55□□□□□ -1.52
Chm-202ENSMUST00000113388 Rpl11Q9CXW4 178 aaKnown RBP5.55□□□□□ -1.52
Chm-202ENSMUST00000113388 Ighv5-4A0A075B5P9 117 aa5.55□□□□□ -1.52
Chm-202ENSMUST00000113388 Ang3P97802 145 aa5.55□□□□□ -1.52
Chm-202ENSMUST00000113388 Ighv1-36A0A0A6YXT2 117 aa5.54□□□□□ -1.52
Chm-202ENSMUST00000113388 Ube2d1P61080 147 aaKnown RBP5.54□□□□□ -1.52
Chm-202ENSMUST00000113388 H1fxQ80ZM5 188 aa5.54□□□□□ -1.52
Chm-202ENSMUST00000113388 Gm9195A0A140LHT4 2805 aa5.54□□□□□ -1.52
Chm-202ENSMUST00000113388 Ighv1-58A0A075B5W9 117 aa5.54□□□□□ -1.52
Chm-202ENSMUST00000113388 Gm16381A0A1Y7VKT9 73 aa5.54□□□□□ -1.52
Retrieved 100 of 22,080 RNA–protein pairs in 41.2 ms