RNA–Protein interactions for RNA: ENSMUST00000108364.7

Sptbn4-204, Transcript of Spectrin beta chain, mousemouse

TSL 1 (best) BASIC

Gene Sptbn4, Length 4,740 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sptbn4-204ENSMUST00000108364 Timm17aQ9Z0V8 171 aa12.14□□□□□ -0.47
Sptbn4-204ENSMUST00000108364 Mrpl35Q9CQL6 188 aa12.14□□□□□ -0.47
Sptbn4-204ENSMUST00000108364 Ifitm1Q9D103 106 aa12.14□□□□□ -0.47
Sptbn4-204ENSMUST00000108364 Gm28539A0A087WSL9 92 aa12.14□□□□□ -0.47
Sptbn4-204ENSMUST00000108364 Lgals4Q8K419 326 aa12.14□□□□□ -0.47
Sptbn4-204ENSMUST00000108364 Trav7-6A0A075B640 112 aa12.13□□□□□ -0.47
Sptbn4-204ENSMUST00000108364 Sorl1O88307 2215 aaKnown RBP12.13□□□□□ -0.47
Sptbn4-204ENSMUST00000108364 Rnf114Q9ET26 229 aa12.13□□□□□ -0.47
Sptbn4-204ENSMUST00000108364 Ighv3-1A0A075B5S6 116 aa12.13□□□□□ -0.47
Sptbn4-204ENSMUST00000108364 Gm9936Q8C864 160 aa12.13□□□□□ -0.47
Sptbn4-204ENSMUST00000108364 Tmem263Q9DAM7 115 aa12.13□□□□□ -0.47
Sptbn4-204ENSMUST00000108364 Gm10553J3QPF1 123 aa12.13□□□□□ -0.47
Sptbn4-204ENSMUST00000108364 Gm815Q3UWS2 115 aa12.13□□□□□ -0.47
Sptbn4-204ENSMUST00000108364 Lyzl4Q9D925 145 aa12.13□□□□□ -0.47
Sptbn4-204ENSMUST00000108364 TroQ6DIC6 2087 aa12.12□□□□□ -0.47
Sptbn4-204ENSMUST00000108364 Dido1Q8C9B9 2256 aaKnown RBP12.12□□□□□ -0.47
Sptbn4-204ENSMUST00000108364 Ighv1-53A0A075B5W3 117 aa12.12□□□□□ -0.47
Sptbn4-204ENSMUST00000108364 Ighv1-12A0A0A6YXJ9 117 aa12.12□□□□□ -0.47
Sptbn4-204ENSMUST00000108364 MalO09198 153 aa12.12□□□□□ -0.47
Sptbn4-204ENSMUST00000108364 Zfand3Q497H0 227 aa12.12□□□□□ -0.47
Sptbn4-204ENSMUST00000108364 Glrp1E9Q9S8 174 aa12.11□□□□□ -0.47
Sptbn4-204ENSMUST00000108364 BB014433Q8C5R5 389 aa12.11□□□□□ -0.47
Sptbn4-204ENSMUST00000108364 Ndufb4Q9CQC7 129 aa12.11□□□□□ -0.47
Sptbn4-204ENSMUST00000108364 Gm7075D3Z497 112 aa12.11□□□□□ -0.47
Sptbn4-204ENSMUST00000108364 AW146154Q3TPQ7 468 aa12.11□□□□□ -0.47
Sptbn4-204ENSMUST00000108364 Spink12Q9D256 87 aa12.11□□□□□ -0.47
Sptbn4-204ENSMUST00000108364 Tln1P26039 2541 aaKnown RBP12.11□□□□□ -0.47
Sptbn4-204ENSMUST00000108364 Foxc1Q61572 553 aa12.11□□□□□ -0.47
Sptbn4-204ENSMUST00000108364 B430305J03RikQ8BQQ8 176 aa12.11□□□□□ -0.47
Sptbn4-204ENSMUST00000108364 March3Q8BRX9 218 aa12.11□□□□□ -0.47
Sptbn4-204ENSMUST00000108364 P01753 117 aa12.1□□□□□ -0.47
Sptbn4-204ENSMUST00000108364 Hivep3A2A884 2348 aa12.1□□□□□ -0.47
Sptbn4-204ENSMUST00000108364 Wfdc11A2A5H7 82 aa12.1□□□□□ -0.47
Sptbn4-204ENSMUST00000108364 P01738 130 aa12.1□□□□□ -0.47
Sptbn4-204ENSMUST00000108364 Morn5Q9DAI9 170 aa12.1□□□□□ -0.47
Sptbn4-204ENSMUST00000108364 Wisp2Q9Z0G4 251 aa12.1□□□□□ -0.47
Sptbn4-204ENSMUST00000108364 Trav9d-4A0A0G2JG37 103 aa12.09□□□□□ -0.47
Sptbn4-204ENSMUST00000108364 Gm5878E9PUB3 99 aa12.09□□□□□ -0.47
Sptbn4-204ENSMUST00000108364 Defa21Q8C1P2 93 aa12.09□□□□□ -0.47
Sptbn4-204ENSMUST00000108364 Ndufs7Q9DC70 224 aa12.09□□□□□ -0.47
Sptbn4-204ENSMUST00000108364 BlcapP62951 87 aa12.09□□□□□ -0.47
Sptbn4-204ENSMUST00000108364 TrioQ0KL02 3102 aa12.09□□□□□ -0.47
Sptbn4-204ENSMUST00000108364 Reg3gO09049 174 aa12.09□□□□□ -0.47
Sptbn4-204ENSMUST00000108364 Zfp951A0A087WRH0 451 aa12.09□□□□□ -0.47
Sptbn4-204ENSMUST00000108364 Prp2P05143 317 aa12.09□□□□□ -0.47
Sptbn4-204ENSMUST00000108364 Zfyve26Q5DU37 2529 aa12.08□□□□□ -0.47
Sptbn4-204ENSMUST00000108364 Igkv6-13A0A0G2JGY3 119 aa12.08□□□□□ -0.48
Sptbn4-204ENSMUST00000108364 Ighv5-9-1A0A0A6YVS4 126 aa12.08□□□□□ -0.48
Sptbn4-204ENSMUST00000108364 Kiaa1549Q68FD9 1940 aa12.08□□□□□ -0.48
Sptbn4-204ENSMUST00000108364 Igkv4-74A0A0B4J1I3 119 aa12.08□□□□□ -0.48
Sptbn4-204ENSMUST00000108364 P01786 117 aa12.08□□□□□ -0.48
Sptbn4-204ENSMUST00000108364 Gm1968Q3T9I3 115 aa12.08□□□□□ -0.48
Sptbn4-204ENSMUST00000108364 Cfc1P97766 202 aa12.08□□□□□ -0.48
Sptbn4-204ENSMUST00000108364 Q9DAQ5 155 aa12.08□□□□□ -0.48
Sptbn4-204ENSMUST00000108364 Trav9-2A0A075B647 113 aa12.07□□□□□ -0.48
Sptbn4-204ENSMUST00000108364 Trav9-4A0A0B4J1K2 113 aa12.07□□□□□ -0.48
Sptbn4-204ENSMUST00000108364 Igkv4-62A0A0G2JDW9 117 aa12.07□□□□□ -0.48
Sptbn4-204ENSMUST00000108364 P06328 117 aa12.07□□□□□ -0.48
Sptbn4-204ENSMUST00000108364 Defb29Q8BGW9 78 aa12.07□□□□□ -0.48
Sptbn4-204ENSMUST00000108364 Rpl35aO55142 110 aa12.07□□□□□ -0.48
Sptbn4-204ENSMUST00000108364 Taf15Q8BQ46 557 aaKnown RBP12.07□□□□□ -0.48
Sptbn4-204ENSMUST00000108364 Q9CX25 107 aa12.07□□□□□ -0.48
Sptbn4-204ENSMUST00000108364 Gm5629P06327 117 aa12.06□□□□□ -0.48
Sptbn4-204ENSMUST00000108364 Mrpl52Q9D0Y8 121 aa12.06□□□□□ -0.48
Sptbn4-204ENSMUST00000108364 Trav13d-1A0A075B606 110 aa12.06□□□□□ -0.48
Sptbn4-204ENSMUST00000108364 P01747 120 aa12.06□□□□□ -0.48
Sptbn4-204ENSMUST00000108364 Pcsk5Q04592 1877 aa12.06□□□□□ -0.48
Sptbn4-204ENSMUST00000108364 SelenowP63300 88 aa12.06□□□□□ -0.48
Sptbn4-204ENSMUST00000108364 Prrc2aQ7TSC1 2158 aaKnown RBP12.06□□□□□ -0.48
Sptbn4-204ENSMUST00000108364 Socs3O35718 225 aa12.05□□□□□ -0.48
Sptbn4-204ENSMUST00000108364 Gm15557A6PWY0 234 aa12.05□□□□□ -0.48
Sptbn4-204ENSMUST00000108364 Il19Q8CJ70 176 aa12.05□□□□□ -0.48
Sptbn4-204ENSMUST00000108364 Ighv1-58A0A075B5W9 117 aa12.05□□□□□ -0.48
Sptbn4-204ENSMUST00000108364 Trbv16A0A0B4J1H3 115 aa12.05□□□□□ -0.48
Sptbn4-204ENSMUST00000108364 Gm20726G3UX18 150 aa12.05□□□□□ -0.48
Sptbn4-204ENSMUST00000108364 Igkv4-57A0A0A6YYE7 117 aa12.04□□□□□ -0.48
Sptbn4-204ENSMUST00000108364 Defa27F2Z403 93 aa12.04□□□□□ -0.48
Sptbn4-204ENSMUST00000108364 Fhl1P97447 280 aaKnown RBP12.04□□□□□ -0.48
Sptbn4-204ENSMUST00000108364 Smim1P0C8K7 78 aa12.04□□□□□ -0.48
Sptbn4-204ENSMUST00000108364 Gm16223Q8CBM3 117 aa12.04□□□□□ -0.48
Sptbn4-204ENSMUST00000108364 Ighv8-12A0A0G2JDE1 119 aa12.04□□□□□ -0.48
Sptbn4-204ENSMUST00000108364 Rtl10D3YWW5 146 aa12.04□□□□□ -0.48
Sptbn4-204ENSMUST00000108364 Gm20481G3UXK4 153 aa12.04□□□□□ -0.48
Sptbn4-204ENSMUST00000108364 Ndufa12Q7TMF3 145 aaKnown RBP12.04□□□□□ -0.48
Sptbn4-204ENSMUST00000108364 Spg11Q3UHA3 2430 aa12.04□□□□□ -0.48
Sptbn4-204ENSMUST00000108364 Ighv1-82A0A0G2JEU7 117 aa12.03□□□□□ -0.48
Sptbn4-204ENSMUST00000108364 Klk1b4P00757 256 aa12.03□□□□□ -0.48
Sptbn4-204ENSMUST00000108364 BC048562Q80ZQ7 204 aa12.03□□□□□ -0.48
Sptbn4-204ENSMUST00000108364 Ighv1-52A0A0A6YXC3 117 aa12.03□□□□□ -0.48
Sptbn4-204ENSMUST00000108364 Lage3Q9CR70 148 aa12.03□□□□□ -0.48
Sptbn4-204ENSMUST00000108364 Nsun4C4P6S0 806 aaKnown RBP12.03□□□□□ -0.48
Sptbn4-204ENSMUST00000108364 TshbP12656 138 aa12.02□□□□□ -0.48
Sptbn4-204ENSMUST00000108364 Tmem86bQ497J1 226 aa12.02□□□□□ -0.48
Sptbn4-204ENSMUST00000108364 Trav9n-2A0A0G2JDP3 113 aa12.02□□□□□ -0.49
Sptbn4-204ENSMUST00000108364 Cox8cA6H666 72 aa12.02□□□□□ -0.49
Sptbn4-204ENSMUST00000108364 Vwc2lQ505H4 222 aa12.02□□□□□ -0.49
Sptbn4-204ENSMUST00000108364 Cfap126Q6P8X9 189 aa12.02□□□□□ -0.49
Sptbn4-204ENSMUST00000108364 Lst1O08843 95 aa12.02□□□□□ -0.49
Sptbn4-204ENSMUST00000108364 Ccl24Q9JKC0 119 aa12.02□□□□□ -0.49
Sptbn4-204ENSMUST00000108364 Smim10l1A0A087WNQ7 89 aa12.01□□□□□ -0.49
Retrieved 100 of 22,080 RNA–protein pairs in 42.3 ms