RNA–Protein interactions for RNA: ENSMUST00000035164.9

Topbp1-201, Transcript of DNA topoisomerase 2-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Topbp1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1-201ENSMUST00000035164 TtrP07309 147 aa8.65□□□□□ -1.02
Topbp1-201ENSMUST00000035164 Gcn1E9PVA8 2671 aaKnown RBP8.65□□□□□ -1.02
Topbp1-201ENSMUST00000035164 Itpr1P11881 2749 aa8.65□□□□□ -1.02
Topbp1-201ENSMUST00000035164 Hoxd3P09027 433 aa8.65□□□□□ -1.02
Topbp1-201ENSMUST00000035164 Defa26Q3L180 93 aa8.65□□□□□ -1.02
Topbp1-201ENSMUST00000035164 Parm1Q923D3 296 aa8.65□□□□□ -1.02
Topbp1-201ENSMUST00000035164 Nbeal1E9PYP2 2688 aa8.65□□□□□ -1.02
Topbp1-201ENSMUST00000035164 Ighv1-74A0A0G2JGK2 117 aa8.65□□□□□ -1.03
Topbp1-201ENSMUST00000035164 4930596D02RikQ3V0H9 216 aa8.65□□□□□ -1.03
Topbp1-201ENSMUST00000035164 Gm17334Q8C6U3 126 aa8.65□□□□□ -1.03
Topbp1-201ENSMUST00000035164 Ndufa3Q9CQ91 84 aa8.65□□□□□ -1.03
Topbp1-201ENSMUST00000035164 Trav6-4A0A075B6B4 115 aa8.64□□□□□ -1.03
Topbp1-201ENSMUST00000035164 Q9DAQ5 155 aa8.64□□□□□ -1.03
Topbp1-201ENSMUST00000035164 Iah1Q9DB29 249 aa8.64□□□□□ -1.03
Topbp1-201ENSMUST00000035164 Col27a1Q5QNQ9 1845 aa8.64□□□□□ -1.03
Topbp1-201ENSMUST00000035164 Gm20481G3UXK4 153 aa8.64□□□□□ -1.03
Topbp1-201ENSMUST00000035164 OdaphJ3QNT8 126 aa8.64□□□□□ -1.03
Topbp1-201ENSMUST00000035164 Znf740Q6NZQ6 180 aa8.64□□□□□ -1.03
Topbp1-201ENSMUST00000035164 Cox6cQ9CPQ1 76 aa8.63□□□□□ -1.03
Topbp1-201ENSMUST00000035164 Igkv4-57-1A0A075B5M4 119 aa8.63□□□□□ -1.03
Topbp1-201ENSMUST00000035164 LoxP28301 411 aa8.63□□□□□ -1.03
Topbp1-201ENSMUST00000035164 Cela2aP05208 271 aa8.63□□□□□ -1.03
Topbp1-201ENSMUST00000035164 Gm10251J3QPM5 127 aa8.63□□□□□ -1.03
Topbp1-201ENSMUST00000035164 P01747 120 aa8.63□□□□□ -1.03
Topbp1-201ENSMUST00000035164 E030018B13RikJ3QMS9 113 aa8.62□□□□□ -1.03
Topbp1-201ENSMUST00000035164 TshbP12656 138 aa8.62□□□□□ -1.03
Topbp1-201ENSMUST00000035164 SrarpQ3ULG3 163 aa8.62□□□□□ -1.03
Topbp1-201ENSMUST00000035164 Rbmy1bQ60990 380 aa8.62□□□□□ -1.03
Topbp1-201ENSMUST00000035164 Trav7-6A0A075B640 112 aa8.62□□□□□ -1.03
Topbp1-201ENSMUST00000035164 Smim1P0C8K7 78 aa8.62□□□□□ -1.03
Topbp1-201ENSMUST00000035164 Rpl32-psP17932 135 aa8.61□□□□□ -1.03
Topbp1-201ENSMUST00000035164 Obox8V9GWY9 217 aa8.61□□□□□ -1.03
Topbp1-201ENSMUST00000035164 Cox8cA6H666 72 aa8.61□□□□□ -1.03
Topbp1-201ENSMUST00000035164 P01739 132 aa8.61□□□□□ -1.03
Topbp1-201ENSMUST00000035164 Rmi2Q3UPE3 149 aa8.61□□□□□ -1.03
Topbp1-201ENSMUST00000035164 Ss18l2Q9D174 77 aa8.61□□□□□ -1.03
Topbp1-201ENSMUST00000035164 Dynlrb2Q9DAJ5 96 aa8.61□□□□□ -1.03
Topbp1-201ENSMUST00000035164 Igkv4-74A0A0B4J1I3 119 aa8.61□□□□□ -1.03
Topbp1-201ENSMUST00000035164 Ovol3D3YYM0 189 aa8.61□□□□□ -1.03
Topbp1-201ENSMUST00000035164 Ighv8-12A0A0G2JDE1 119 aa8.6□□□□□ -1.03
Topbp1-201ENSMUST00000035164 SpinklQ8CEK3 90 aa8.6□□□□□ -1.03
Topbp1-201ENSMUST00000035164 Col4a4Q9QZR9 1682 aa8.6□□□□□ -1.03
Topbp1-201ENSMUST00000035164 Avpi1Q9D7H4 142 aa8.6□□□□□ -1.03
Topbp1-201ENSMUST00000035164 P01725 110 aa8.6□□□□□ -1.03
Topbp1-201ENSMUST00000035164 Gm5629P06327 117 aa8.6□□□□□ -1.03
Topbp1-201ENSMUST00000035164 Snrpd3P62320 126 aaKnown RBP8.6□□□□□ -1.03
Topbp1-201ENSMUST00000035164 Defb33Q30KN3 62 aa8.6□□□□□ -1.03
Topbp1-201ENSMUST00000035164 4930415O20RikQ8CDT5 131 aa8.6□□□□□ -1.03
Topbp1-201ENSMUST00000035164 Mpv17l2Q8VIK2 200 aa8.6□□□□□ -1.03
Topbp1-201ENSMUST00000035164 Phpt1Q9DAK9 124 aa8.6□□□□□ -1.03
Topbp1-201ENSMUST00000035164 Fam19a4Q7TPG5 135 aa8.6□□□□□ -1.03
Topbp1-201ENSMUST00000035164 Tmem30bQ8BHG3 353 aa8.6□□□□□ -1.03
Topbp1-201ENSMUST00000035164 March3Q8BRX9 218 aa8.6□□□□□ -1.03
Topbp1-201ENSMUST00000035164 PolqQ8CGS6 2544 aa8.6□□□□□ -1.03
Topbp1-201ENSMUST00000035164 Gm10553J3QPF1 123 aa8.59□□□□□ -1.03
Topbp1-201ENSMUST00000035164 BlcapP62951 87 aa8.59□□□□□ -1.03
Topbp1-201ENSMUST00000035164 PspnO70300 156 aa8.59□□□□□ -1.03
Topbp1-201ENSMUST00000035164 Prp2P05143 317 aa8.59□□□□□ -1.03
Topbp1-201ENSMUST00000035164 Ccl24Q9JKC0 119 aa8.59□□□□□ -1.03
Topbp1-201ENSMUST00000035164 Trav13d-1A0A075B606 110 aa8.59□□□□□ -1.03
Topbp1-201ENSMUST00000035164 Smim20D3Z7Q2 69 aa8.59□□□□□ -1.03
Topbp1-201ENSMUST00000035164 Fam222aQ6PGH4 453 aa8.59□□□□□ -1.03
Topbp1-201ENSMUST00000035164 Gm10295Q8CCF3 114 aa8.59□□□□□ -1.03
Topbp1-201ENSMUST00000035164 Ighv3-4A0A0A6YXF1 117 aa8.58□□□□□ -1.04
Topbp1-201ENSMUST00000035164 Igkv4-57A0A0A6YYE7 117 aa8.58□□□□□ -1.04
Topbp1-201ENSMUST00000035164 1520401A03RikA0A0J9YVH6 598 aa8.58□□□□□ -1.04
Topbp1-201ENSMUST00000035164 Mrps21P58059 87 aa8.58□□□□□ -1.04
Topbp1-201ENSMUST00000035164 Cfc1P97766 202 aa8.58□□□□□ -1.04
Topbp1-201ENSMUST00000035164 Fam216aQ9DB54 251 aa8.58□□□□□ -1.04
Topbp1-201ENSMUST00000035164 P01750 117 aa8.58□□□□□ -1.04
Topbp1-201ENSMUST00000035164 Mrpl35Q9CQL6 188 aa8.58□□□□□ -1.04
Topbp1-201ENSMUST00000035164 Vps13cQ8BX70 3748 aa8.58□□□□□ -1.04
Topbp1-201ENSMUST00000035164 Mob4Q6PEB6 225 aa8.58□□□□□ -1.04
Topbp1-201ENSMUST00000035164 Gm9970F6ZED4 185 aa8.57□□□□□ -1.04
Topbp1-201ENSMUST00000035164 Ebi3O35228 228 aa8.57□□□□□ -1.04
Topbp1-201ENSMUST00000035164 Ube2e1P52482 193 aa8.57□□□□□ -1.04
Topbp1-201ENSMUST00000035164 Ighv1-4A0A075B5T4 117 aa8.57□□□□□ -1.04
Topbp1-201ENSMUST00000035164 Trav4n-4A0A075B615 110 aa8.57□□□□□ -1.04
Topbp1-201ENSMUST00000035164 Edn3P48299 214 aa8.57□□□□□ -1.04
Topbp1-201ENSMUST00000035164 Il1f10Q8R459 152 aa8.57□□□□□ -1.04
Topbp1-201ENSMUST00000035164 Spink1P09036 80 aa8.57□□□□□ -1.04
Topbp1-201ENSMUST00000035164 AW146154Q3TPQ7 468 aa8.57□□□□□ -1.04
Topbp1-201ENSMUST00000035164 Ube2wQ8VDW4 151 aa8.57□□□□□ -1.04
Topbp1-201ENSMUST00000035164 P06328 117 aa8.57□□□□□ -1.04
Topbp1-201ENSMUST00000035164 CirbpP60824 172 aaKnown RBP8.57□□□□□ -1.04
Topbp1-201ENSMUST00000035164 Zfand3Q497H0 227 aa8.57□□□□□ -1.04
Topbp1-201ENSMUST00000035164 Edn2P22389 175 aa8.56□□□□□ -1.04
Topbp1-201ENSMUST00000035164 Morn5Q9DAI9 170 aa8.56□□□□□ -1.04
Topbp1-201ENSMUST00000035164 P01643 108 aa8.56□□□□□ -1.04
Topbp1-201ENSMUST00000035164 Q9D8Q6 235 aa8.56□□□□□ -1.04
Topbp1-201ENSMUST00000035164 Ighv1-53A0A075B5W3 117 aa8.56□□□□□ -1.04
Topbp1-201ENSMUST00000035164 Gata1P17679 413 aa8.56□□□□□ -1.04
Topbp1-201ENSMUST00000035164 Q9CX25 107 aa8.56□□□□□ -1.04
Topbp1-201ENSMUST00000035164 Atp5g3P56384 141 aa8.56□□□□□ -1.04
Topbp1-201ENSMUST00000035164 Gm21748Q3UE70 102 aa8.56□□□□□ -1.04
Topbp1-201ENSMUST00000035164 Defa25Q5G864 92 aa8.55□□□□□ -1.04
Topbp1-201ENSMUST00000035164 E130116L18RikQ8BMV6 101 aa8.55□□□□□ -1.04
Topbp1-201ENSMUST00000035164 Ighv1-82A0A0G2JEU7 117 aa8.55□□□□□ -1.04
Topbp1-201ENSMUST00000035164 P04219 140 aa8.55□□□□□ -1.04
Topbp1-201ENSMUST00000035164 A530064D06RikQ8BNV8 229 aa8.55□□□□□ -1.04
Retrieved 100 of 22,080 RNA–protein pairs in 81.6 ms