RNA–Protein interactions for RNA: ENSMUST00000029139.8

Trim55-201, Transcript of MCG19772, mousemouse

APPRIS P1 TSL 2 BASIC

Gene Trim55, Length 2,595 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim55-201ENSMUST00000029139 LoxP28301 411 aa8.64□□□□□ -1.03
Trim55-201ENSMUST00000029139 Prdx2Q61171 198 aaKnown RBP8.64□□□□□ -1.03
Trim55-201ENSMUST00000029139 H1fxQ80ZM5 188 aa8.64□□□□□ -1.03
Trim55-201ENSMUST00000029139 Pkd1l2Q7TN88 2461 aa8.64□□□□□ -1.03
Trim55-201ENSMUST00000029139 A530064D06RikQ8BNV8 229 aa8.64□□□□□ -1.03
Trim55-201ENSMUST00000029139 Gm10271F6WY25 52 aa8.63□□□□□ -1.03
Trim55-201ENSMUST00000029139 Mrps12O35680 139 aa8.63□□□□□ -1.03
Trim55-201ENSMUST00000029139 Dkk1O54908 272 aa8.63□□□□□ -1.03
Trim55-201ENSMUST00000029139 Timm17bQ9Z0V7 172 aa8.63□□□□□ -1.03
Trim55-201ENSMUST00000029139 Cacna1eQ61290 2272 aa8.63□□□□□ -1.03
Trim55-201ENSMUST00000029139 NgfP01139 241 aa8.63□□□□□ -1.03
Trim55-201ENSMUST00000029139 Gm21748Q3UE70 102 aa8.63□□□□□ -1.03
Trim55-201ENSMUST00000029139 Gm16223Q8CBM3 117 aa8.63□□□□□ -1.03
Trim55-201ENSMUST00000029139 Ighv5-8A0A075B676 92 aa8.62□□□□□ -1.03
Trim55-201ENSMUST00000029139 Hectd1Q69ZR2 2618 aaKnown RBP8.62□□□□□ -1.03
Trim55-201ENSMUST00000029139 Tnrc18Q80WC3 2878 aa8.62□□□□□ -1.03
Trim55-201ENSMUST00000029139 AspmQ8CJ27 3122 aa8.62□□□□□ -1.03
Trim55-201ENSMUST00000029139 Trav19A0A0B4J1K4 119 aa8.62□□□□□ -1.03
Trim55-201ENSMUST00000029139 AngP21570 145 aa8.62□□□□□ -1.03
Trim55-201ENSMUST00000029139 Gm4861Q8C5A4 106 aa8.62□□□□□ -1.03
Trim55-201ENSMUST00000029139 A930002H24RikQ8C8Y3 163 aa8.62□□□□□ -1.03
Trim55-201ENSMUST00000029139 Defa27F2Z403 93 aa8.61□□□□□ -1.03
Trim55-201ENSMUST00000029139 Gm5153P01627 120 aa8.61□□□□□ -1.03
Trim55-201ENSMUST00000029139 P01753 117 aa8.61□□□□□ -1.03
Trim55-201ENSMUST00000029139 5730596B20RikQ8BQ08 205 aa8.61□□□□□ -1.03
Trim55-201ENSMUST00000029139 OtosQ8R448 89 aa8.61□□□□□ -1.03
Trim55-201ENSMUST00000029139 Mrpl35Q9CQL6 188 aa8.61□□□□□ -1.03
Trim55-201ENSMUST00000029139 Trav9d-1A0A075B699 112 aa8.61□□□□□ -1.03
Trim55-201ENSMUST00000029139 Gm10160F6Y577 67 aa8.61□□□□□ -1.03
Trim55-201ENSMUST00000029139 Gm2564F6Z9S8 108 aa8.61□□□□□ -1.03
Trim55-201ENSMUST00000029139 Cxxc4Q6NXI8 198 aa8.61□□□□□ -1.03
Trim55-201ENSMUST00000029139 Defb22Q8BVC1 179 aa8.61□□□□□ -1.03
Trim55-201ENSMUST00000029139 HampQ9EQ21 83 aa8.61□□□□□ -1.03
Trim55-201ENSMUST00000029139 Urb1Q571H0 2274 aaKnown RBP8.61□□□□□ -1.03
Trim55-201ENSMUST00000029139 LeprotO89013 131 aa8.6□□□□□ -1.03
Trim55-201ENSMUST00000029139 Rbm3O89086 153 aaKnown RBP8.6□□□□□ -1.03
Trim55-201ENSMUST00000029139 Tmem254aP0DN89 123 aa8.6□□□□□ -1.03
Trim55-201ENSMUST00000029139 Tmem254bP0DN90 123 aa8.6□□□□□ -1.03
Trim55-201ENSMUST00000029139 Tmem254cP0DN91 123 aa8.6□□□□□ -1.03
Trim55-201ENSMUST00000029139 Znf740Q6NZQ6 180 aa8.6□□□□□ -1.03
Trim55-201ENSMUST00000029139 Spink2Q8BMY7 86 aa8.6□□□□□ -1.03
Trim55-201ENSMUST00000029139 4930415O20RikQ8CDT5 131 aa8.6□□□□□ -1.03
Trim55-201ENSMUST00000029139 Defb6Q91VD6 63 aa8.6□□□□□ -1.03
Trim55-201ENSMUST00000029139 Svs5P30933 122 aa8.6□□□□□ -1.03
Trim55-201ENSMUST00000029139 AvpP35455 168 aa8.6□□□□□ -1.03
Trim55-201ENSMUST00000029139 Snrpd3P62320 126 aaKnown RBP8.6□□□□□ -1.03
Trim55-201ENSMUST00000029139 Smim26Q3V460 107 aa8.6□□□□□ -1.03
Trim55-201ENSMUST00000029139 Phpt1Q9DAK9 124 aa8.6□□□□□ -1.03
Trim55-201ENSMUST00000029139 Gm17472A0A075B683 117 aa8.59□□□□□ -1.03
Trim55-201ENSMUST00000029139 Glrp1E9Q9S8 174 aa8.59□□□□□ -1.03
Trim55-201ENSMUST00000029139 Hoxd3P09027 433 aa8.59□□□□□ -1.03
Trim55-201ENSMUST00000029139 4930535I16RikQ9CUI2 172 aa8.59□□□□□ -1.03
Trim55-201ENSMUST00000029139 CnbpP53996 178 aaKnown RBP8.59□□□□□ -1.03
Trim55-201ENSMUST00000029139 Tmem14cQ9CQN6 114 aa8.59□□□□□ -1.03
Trim55-201ENSMUST00000029139 Bub3Q9WVA3 326 aa8.59□□□□□ -1.03
Trim55-201ENSMUST00000029139 Igkv6-14A0A140T8P1 115 aa8.58□□□□□ -1.04
Trim55-201ENSMUST00000029139 Vpreb2P13373 142 aa8.58□□□□□ -1.04
Trim55-201ENSMUST00000029139 Rpl28P41105 137 aaKnown RBP8.58□□□□□ -1.04
Trim55-201ENSMUST00000029139 Gm13199Q8C8E0 125 aa8.58□□□□□ -1.04
Trim55-201ENSMUST00000029139 Itpr3P70227 2670 aa8.58□□□□□ -1.04
Trim55-201ENSMUST00000029139 Cdh23Q99PF4 3354 aa8.58□□□□□ -1.04
Trim55-201ENSMUST00000029139 Ighv1-62-1A0A075B5U3 116 aa8.58□□□□□ -1.04
Trim55-201ENSMUST00000029139 Lyrm9Q3UN90 78 aa8.58□□□□□ -1.04
Trim55-201ENSMUST00000029139 Tmem263Q9DAM7 115 aa8.58□□□□□ -1.04
Trim55-201ENSMUST00000029139 Ighv12-3A0A075B5T1 117 aa8.57□□□□□ -1.04
Trim55-201ENSMUST00000029139 P01819 144 aa8.57□□□□□ -1.04
Trim55-201ENSMUST00000029139 IappP12968 93 aa8.57□□□□□ -1.04
Trim55-201ENSMUST00000029139 Spint4Q9D263 159 aa8.57□□□□□ -1.04
Trim55-201ENSMUST00000029139 BC025920Q3US60 128 aa8.57□□□□□ -1.04
Trim55-201ENSMUST00000029139 Mpv17l2Q8VIK2 200 aa8.57□□□□□ -1.04
Trim55-201ENSMUST00000029139 Znrf1Q91V17 227 aa8.57□□□□□ -1.04
Trim55-201ENSMUST00000029139 Timm17aQ9Z0V8 171 aa8.57□□□□□ -1.04
Trim55-201ENSMUST00000029139 CdsnQ7TPC1 561 aa8.56□□□□□ -1.04
Trim55-201ENSMUST00000029139 Gm10118Q8C8J5 116 aa8.56□□□□□ -1.04
Trim55-201ENSMUST00000029139 Itpr1P11881 2749 aa8.56□□□□□ -1.04
Trim55-201ENSMUST00000029139 Ighv1-81A0A075B5Y4 117 aa8.56□□□□□ -1.04
Trim55-201ENSMUST00000029139 SelenowP63300 88 aa8.56□□□□□ -1.04
Trim55-201ENSMUST00000029139 Gm6040Q4QY32 63 aa8.56□□□□□ -1.04
Trim55-201ENSMUST00000029139 Ighv1-5A0A0A6YWG2 117 aa8.55□□□□□ -1.04
Trim55-201ENSMUST00000029139 BikO70337 150 aa8.55□□□□□ -1.04
Trim55-201ENSMUST00000029139 Rnase2aQ8K196 155 aa8.55□□□□□ -1.04
Trim55-201ENSMUST00000029139 Gm10521E9PZK0 135 aa8.55□□□□□ -1.04
Trim55-201ENSMUST00000029139 B230217C12RikE9Q3Z1 139 aa8.55□□□□□ -1.04
Trim55-201ENSMUST00000029139 PspnO70300 156 aa8.55□□□□□ -1.04
Trim55-201ENSMUST00000029139 P01680 129 aa8.55□□□□□ -1.04
Trim55-201ENSMUST00000029139 Mob4Q6PEB6 225 aa8.55□□□□□ -1.04
Trim55-201ENSMUST00000029139 Sptbn4E9PX29 2561 aa8.54□□□□□ -1.04
Trim55-201ENSMUST00000029139 Lyz1P17897 148 aa8.54□□□□□ -1.04
Trim55-201ENSMUST00000029139 Gm10384Q3UQ87 92 aa8.54□□□□□ -1.04
Trim55-201ENSMUST00000029139 RhohQ9D3G9 191 aa8.54□□□□□ -1.04
Trim55-201ENSMUST00000029139 Med13Q5SWW4 2171 aa8.54□□□□□ -1.04
Trim55-201ENSMUST00000029139 Ighv4-1A0A075B5R5 116 aa8.54□□□□□ -1.04
Trim55-201ENSMUST00000029139 Igkv5-37A0A140T8N4 115 aa8.54□□□□□ -1.04
Trim55-201ENSMUST00000029139 Ighv3-6P18531 116 aa8.54□□□□□ -1.04
Trim55-201ENSMUST00000029139 Prelid3aQ8VE85 172 aa8.54□□□□□ -1.04
Trim55-201ENSMUST00000029139 Ighv1-69A0A0G2JFS5 117 aa8.53□□□□□ -1.04
Trim55-201ENSMUST00000029139 Igkv6-23A0A140T8N5 115 aa8.53□□□□□ -1.04
Trim55-201ENSMUST00000029139 Gp9O88186 177 aa8.53□□□□□ -1.04
Trim55-201ENSMUST00000029139 Rpl39P62892 51 aa8.53□□□□□ -1.04
Trim55-201ENSMUST00000029139 Eif4ebp3Q80VV3 101 aa8.53□□□□□ -1.04
Retrieved 100 of 22,080 RNA–protein pairs in 247.2 ms