RNA–Protein interactions for RNA: ENSMUST00000028767.8

Rtf1-201, Transcript of RNA polymerase-associated protein RTF1 homolog, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rtf1, Length 4,664 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rtf1-201ENSMUST00000028767 Ccl21cP86793 133 aa11.17□□□□□ -0.62
Rtf1-201ENSMUST00000028767 Vsig4F6TUL9 280 aa11.16□□□□□ -0.62
Rtf1-201ENSMUST00000028767 PlaurP35456 327 aa11.16□□□□□ -0.62
Rtf1-201ENSMUST00000028767 Prelid3aQ8VE85 172 aa11.16□□□□□ -0.62
Rtf1-201ENSMUST00000028767 SNORCQ9CXL7 121 aa11.16□□□□□ -0.62
Rtf1-201ENSMUST00000028767 P01786 117 aa11.16□□□□□ -0.62
Rtf1-201ENSMUST00000028767 Rnf185Q91YT2 192 aa11.16□□□□□ -0.62
Rtf1-201ENSMUST00000028767 Xlr5cQ9JJR2 179 aa11.16□□□□□ -0.62
Rtf1-201ENSMUST00000028767 Dchs2A0A0A6YW72 3346 aa11.16□□□□□ -0.62
Rtf1-201ENSMUST00000028767 Ighv5-9-1A0A0A6YVS4 126 aa11.16□□□□□ -0.62
Rtf1-201ENSMUST00000028767 Gm20499D3Z4G5 72 aa11.16□□□□□ -0.62
Rtf1-201ENSMUST00000028767 Gm7489Q3UT34 171 aa11.16□□□□□ -0.62
Rtf1-201ENSMUST00000028767 Tac4Q99N14 128 aa11.16□□□□□ -0.62
Rtf1-201ENSMUST00000028767 Arhgap32Q811P8 2089 aa11.16□□□□□ -0.62
Rtf1-201ENSMUST00000028767 Gm5089A1L3C8 106 aa11.15□□□□□ -0.62
Rtf1-201ENSMUST00000028767 Tcte2E9PY37 120 aa11.15□□□□□ -0.62
Rtf1-201ENSMUST00000028767 P0C913 63 aa11.15□□□□□ -0.62
Rtf1-201ENSMUST00000028767 1810032O08RikE9PZV8 113 aa11.15□□□□□ -0.62
Rtf1-201ENSMUST00000028767 Egr2P08152 470 aa11.15□□□□□ -0.62
Rtf1-201ENSMUST00000028767 Dmrt3Q80WT2 476 aa11.15□□□□□ -0.62
Rtf1-201ENSMUST00000028767 Ankrd39Q9D2X0 183 aa11.15□□□□□ -0.62
Rtf1-201ENSMUST00000028767 BC107364E9Q5A2 140 aa11.15□□□□□ -0.62
Rtf1-201ENSMUST00000028767 Tmem263Q9DAM7 115 aa11.15□□□□□ -0.62
Rtf1-201ENSMUST00000028767 Gm7257D3YX25 99 aa11.15□□□□□ -0.63
Rtf1-201ENSMUST00000028767 H2-DMb1P35737 261 aa11.15□□□□□ -0.63
Rtf1-201ENSMUST00000028767 Myo18bE9PV66 2605 aa11.15□□□□□ -0.63
Rtf1-201ENSMUST00000028767 Igkv4-74A0A0B4J1I3 119 aa11.14□□□□□ -0.63
Rtf1-201ENSMUST00000028767 P06328 117 aa11.14□□□□□ -0.63
Rtf1-201ENSMUST00000028767 OdaphJ3QNT8 126 aa11.14□□□□□ -0.63
Rtf1-201ENSMUST00000028767 Gm17455G3UW87 128 aa11.14□□□□□ -0.63
Rtf1-201ENSMUST00000028767 Cd69P37217 199 aa11.14□□□□□ -0.63
Rtf1-201ENSMUST00000028767 Ndufs7Q9DC70 224 aa11.14□□□□□ -0.63
Rtf1-201ENSMUST00000028767 P01738 130 aa11.13□□□□□ -0.63
Rtf1-201ENSMUST00000028767 P01802 115 aa11.13□□□□□ -0.63
Rtf1-201ENSMUST00000028767 Ighv2-6A0A075B6A7 116 aa11.13□□□□□ -0.63
Rtf1-201ENSMUST00000028767 Trav9n-2A0A0G2JDP3 113 aa11.13□□□□□ -0.63
Rtf1-201ENSMUST00000028767 Dpm2Q9Z324 84 aa11.12□□□□□ -0.63
Rtf1-201ENSMUST00000028767 Ighv1-62-2A0A0A6YXZ4 119 aa11.12□□□□□ -0.63
Rtf1-201ENSMUST00000028767 F11rO88792 300 aa11.12□□□□□ -0.63
Rtf1-201ENSMUST00000028767 CckP09240 115 aa11.12□□□□□ -0.63
Rtf1-201ENSMUST00000028767 Tal2Q62282 108 aa11.12□□□□□ -0.63
Rtf1-201ENSMUST00000028767 Snai3Q9QY31 287 aa11.12□□□□□ -0.63
Rtf1-201ENSMUST00000028767 Ighv1-49A0A0A6YWX2 117 aa11.12□□□□□ -0.63
Rtf1-201ENSMUST00000028767 Rpl36aP83882 106 aaKnown RBP11.12□□□□□ -0.63
Rtf1-201ENSMUST00000028767 1500011B03RikQ3TTH7 73 aa11.11□□□□□ -0.63
Rtf1-201ENSMUST00000028767 Srsf2Q62093 221 aaKnown RBP11.11□□□□□ -0.63
Rtf1-201ENSMUST00000028767 P01741 114 aa11.1□□□□□ -0.63
Rtf1-201ENSMUST00000028767 Prp2P05143 317 aa11.1□□□□□ -0.63
Rtf1-201ENSMUST00000028767 Tomm7Q9D173 55 aa11.1□□□□□ -0.63
Rtf1-201ENSMUST00000028767 Bex1Q9R224 128 aa11.1□□□□□ -0.63
Rtf1-201ENSMUST00000028767 TroQ6DIC6 2087 aa11.1□□□□□ -0.63
Rtf1-201ENSMUST00000028767 Tmem238A9JSM3 176 aa11.1□□□□□ -0.63
Rtf1-201ENSMUST00000028767 1700056E22RikF7CNM6 234 aa11.1□□□□□ -0.63
Rtf1-201ENSMUST00000028767 TshbP12656 138 aa11.1□□□□□ -0.63
Rtf1-201ENSMUST00000028767 Gm16223Q8CBM3 117 aa11.1□□□□□ -0.63
Rtf1-201ENSMUST00000028767 SpegQ62407 3262 aa11.1□□□□□ -0.63
Rtf1-201ENSMUST00000028767 Cox6b1P56391 86 aaKnown RBP11.09□□□□□ -0.63
Rtf1-201ENSMUST00000028767 Ly6g5bQ8K1T4 194 aa11.09□□□□□ -0.63
Rtf1-201ENSMUST00000028767 Gm28269A0A087WSG3 125 aa11.09□□□□□ -0.63
Rtf1-201ENSMUST00000028767 Lect2O88803 151 aa11.09□□□□□ -0.63
Rtf1-201ENSMUST00000028767 Tcrg-C1A0A075B5Z0 172 aa11.09□□□□□ -0.63
Rtf1-201ENSMUST00000028767 Il19Q8CJ70 176 aa11.09□□□□□ -0.63
Rtf1-201ENSMUST00000028767 Igkv4-59A0A0B4J1I8 117 aa11.08□□□□□ -0.64
Rtf1-201ENSMUST00000028767 Foxi2Q3I5G5 311 aa11.08□□□□□ -0.64
Rtf1-201ENSMUST00000028767 Gemin7Q9CWY4 129 aa11.08□□□□□ -0.64
Rtf1-201ENSMUST00000028767 Gm42674D3YUT9 64 aa11.08□□□□□ -0.64
Rtf1-201ENSMUST00000028767 Zfp462B1AWL2 2495 aaKnown RBP11.08□□□□□ -0.64
Rtf1-201ENSMUST00000028767 1700020N15RikL7MTX3 112 aa11.08□□□□□ -0.64
Rtf1-201ENSMUST00000028767 Hoxd3P09027 433 aa11.08□□□□□ -0.64
Rtf1-201ENSMUST00000028767 Spink12Q9D256 87 aa11.08□□□□□ -0.64
Rtf1-201ENSMUST00000028767 Dchs1E9PVD3 3291 aa11.07□□□□□ -0.64
Rtf1-201ENSMUST00000028767 Insl3O09107 122 aa11.07□□□□□ -0.64
Rtf1-201ENSMUST00000028767 Gm10226O88253 85 aa11.07□□□□□ -0.64
Rtf1-201ENSMUST00000028767 C2cd3Q52KB6 2323 aa11.07□□□□□ -0.64
Rtf1-201ENSMUST00000028767 Ighv12-3A0A075B5T1 117 aa11.07□□□□□ -0.64
Rtf1-201ENSMUST00000028767 Gm29423A0A087WRM1 55 aa11.07□□□□□ -0.64
Rtf1-201ENSMUST00000028767 Nbeal1E9PYP2 2688 aa11.07□□□□□ -0.64
Rtf1-201ENSMUST00000028767 Cox6cQ9CPQ1 76 aa11.07□□□□□ -0.64
Rtf1-201ENSMUST00000028767 P18527 97 aa11.06□□□□□ -0.64
Rtf1-201ENSMUST00000028767 Rnf183Q8QZS5 190 aa11.06□□□□□ -0.64
Rtf1-201ENSMUST00000028767 Bles03Q8VD62 251 aa11.06□□□□□ -0.64
Rtf1-201ENSMUST00000028767 PpdpfQ9CR37 115 aa11.06□□□□□ -0.64
Rtf1-201ENSMUST00000028767 Fam19a4Q7TPG5 135 aa11.06□□□□□ -0.64
Rtf1-201ENSMUST00000028767 C1qcQ02105 246 aa11.06□□□□□ -0.64
Rtf1-201ENSMUST00000028767 Gm20730A0A075B5J6 119 aa11.06□□□□□ -0.64
Rtf1-201ENSMUST00000028767 Ighv2-3A0A075B696 115 aa11.06□□□□□ -0.64
Rtf1-201ENSMUST00000028767 Ndufa1O35683 70 aa11.06□□□□□ -0.64
Rtf1-201ENSMUST00000028767 Gm10775Q3V290 127 aa11.06□□□□□ -0.64
Rtf1-201ENSMUST00000028767 Igkv4-71A0A0G2JEH0 117 aa11.05□□□□□ -0.64
Rtf1-201ENSMUST00000028767 Shisa9Q9CZN4 424 aa11.05□□□□□ -0.64
Rtf1-201ENSMUST00000028767 LhbO09108 141 aa11.05□□□□□ -0.64
Rtf1-201ENSMUST00000028767 Scgb1b24B1B0N6 92 aa11.05□□□□□ -0.64
Rtf1-201ENSMUST00000028767 Trav7d-3Q5R1I1 112 aa11.05□□□□□ -0.64
Rtf1-201ENSMUST00000028767 Lyzl4Q9D925 145 aa11.05□□□□□ -0.64
Rtf1-201ENSMUST00000028767 BtcQ05928 177 aa11.05□□□□□ -0.64
Rtf1-201ENSMUST00000028767 Gm1968Q3T9I3 115 aa11.05□□□□□ -0.64
Rtf1-201ENSMUST00000028767 Dnal4Q9DCM4 105 aa11.04□□□□□ -0.64
Rtf1-201ENSMUST00000028767 RetnQ99P87 114 aa11.04□□□□□ -0.64
Rtf1-201ENSMUST00000028767 Phpt1Q9DAK9 124 aa11.03□□□□□ -0.64
Rtf1-201ENSMUST00000028767 Leap2Q91V13 76 aa11.03□□□□□ -0.64
Retrieved 100 of 22,080 RNA–protein pairs in 74.3 ms