RNA–Protein interactions for RNA: ENSMUST00000028280.13

Col5a1-201, Transcript of Collagen alpha-1(V) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col5a1, Length 8,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1-201ENSMUST00000028280 Tmem213Q08EA8 116 aa11.02□□□□□ -0.64
Col5a1-201ENSMUST00000028280 Prok1Q14A28 105 aa11.02□□□□□ -0.64
Col5a1-201ENSMUST00000028280 Wdr90Q6ZPG2 1874 aa11.02□□□□□ -0.64
Col5a1-201ENSMUST00000028280 Gm37389A0A0A6YW05 95 aa11.02□□□□□ -0.64
Col5a1-201ENSMUST00000028280 Gm4861Q8C5A4 106 aa11.02□□□□□ -0.64
Col5a1-201ENSMUST00000028280 BC067074F6RXI4 2391 aa11.02□□□□□ -0.65
Col5a1-201ENSMUST00000028280 Igkv3-10A0A0G2JGN0 119 aa11.02□□□□□ -0.65
Col5a1-201ENSMUST00000028280 Gm17472A0A075B683 117 aa11.02□□□□□ -0.65
Col5a1-201ENSMUST00000028280 Pom121l2Q5SW25 972 aa11.02□□□□□ -0.65
Col5a1-201ENSMUST00000028280 P01756 117 aa11.02□□□□□ -0.65
Col5a1-201ENSMUST00000028280 P01757 117 aa11.02□□□□□ -0.65
Col5a1-201ENSMUST00000028280 Gm5941Q497P9 117 aa11.02□□□□□ -0.65
Col5a1-201ENSMUST00000028280 Rif1Q6PR54 2419 aaKnown RBP11.01□□□□□ -0.65
Col5a1-201ENSMUST00000028280 A0A1L1SR50 188 aa11.01□□□□□ -0.65
Col5a1-201ENSMUST00000028280 Fam110dQ80X91 271 aa11.01□□□□□ -0.65
Col5a1-201ENSMUST00000028280 Ighv3-4A0A0A6YXF1 117 aa11.01□□□□□ -0.65
Col5a1-201ENSMUST00000028280 Prdm6Q3UZD5 596 aa11.01□□□□□ -0.65
Col5a1-201ENSMUST00000028280 Gtsf1Q9DAN6 167 aa11.01□□□□□ -0.65
Col5a1-201ENSMUST00000028280 Gm10881P01642 115 aa11.01□□□□□ -0.65
Col5a1-201ENSMUST00000028280 Mrps12O35680 139 aa11.01□□□□□ -0.65
Col5a1-201ENSMUST00000028280 Prh1P05142 261 aa11.01□□□□□ -0.65
Col5a1-201ENSMUST00000028280 Gm10518F6UQQ9 182 aa11.01□□□□□ -0.65
Col5a1-201ENSMUST00000028280 Ormdl1Q921I0 153 aa11.01□□□□□ -0.65
Col5a1-201ENSMUST00000028280 Gm10192Q3V0S1 108 aa11□□□□□ -0.65
Col5a1-201ENSMUST00000028280 Gm26602M0QWA4 95 aa11□□□□□ -0.65
Col5a1-201ENSMUST00000028280 B9d2Q3UK10 175 aa11□□□□□ -0.65
Col5a1-201ENSMUST00000028280 Cox7b2Q9D2H1 82 aa11□□□□□ -0.65
Col5a1-201ENSMUST00000028280 Thsd7bQ6P4U0 1607 aa11□□□□□ -0.65
Col5a1-201ENSMUST00000028280 Igkv2-109A0A075B5K6 120 aa11□□□□□ -0.65
Col5a1-201ENSMUST00000028280 Q8C708 225 aa10.99□□□□□ -0.65
Col5a1-201ENSMUST00000028280 Igf1P05017 153 aa10.99□□□□□ -0.65
Col5a1-201ENSMUST00000028280 Iglc1A0A0G2JE99 106 aa10.99□□□□□ -0.65
Col5a1-201ENSMUST00000028280 Pglyrp1O88593 182 aa10.99□□□□□ -0.65
Col5a1-201ENSMUST00000028280 P01843 105 aa10.99□□□□□ -0.65
Col5a1-201ENSMUST00000028280 Klk9Q32M27 251 aa10.99□□□□□ -0.65
Col5a1-201ENSMUST00000028280 Tm2d2Q8R0I4 213 aa10.99□□□□□ -0.65
Col5a1-201ENSMUST00000028280 Cdpf1Q8R3A2 119 aa10.99□□□□□ -0.65
Col5a1-201ENSMUST00000028280 H2al1mQ9DAD9 105 aa10.99□□□□□ -0.65
Col5a1-201ENSMUST00000028280 Klk12B2RVZ0 247 aa10.99□□□□□ -0.65
Col5a1-201ENSMUST00000028280 Ly6c1P0CW02 131 aa10.99□□□□□ -0.65
Col5a1-201ENSMUST00000028280 Gm10295Q8CCF3 114 aa10.99□□□□□ -0.65
Col5a1-201ENSMUST00000028280 Gm10762Q9CZN6 115 aa10.99□□□□□ -0.65
Col5a1-201ENSMUST00000028280 Igkv1-88A0A140T8N1 120 aa10.98□□□□□ -0.65
Col5a1-201ENSMUST00000028280 Ndufb1P0DN34 57 aa10.98□□□□□ -0.65
Col5a1-201ENSMUST00000028280 Fgf6P21658 208 aa10.98□□□□□ -0.65
Col5a1-201ENSMUST00000028280 Cela2aP05208 271 aa10.98□□□□□ -0.65
Col5a1-201ENSMUST00000028280 Pde6gP09174 87 aa10.98□□□□□ -0.65
Col5a1-201ENSMUST00000028280 Igkv4-92A0A0B4J1I2 117 aa10.98□□□□□ -0.65
Col5a1-201ENSMUST00000028280 NpbQ8K4P1 119 aa10.98□□□□□ -0.65
Col5a1-201ENSMUST00000028280 Spag11Q8K4N2 71 aa10.97□□□□□ -0.65
Col5a1-201ENSMUST00000028280 Zfp36l1P23950 338 aa10.97□□□□□ -0.65
Col5a1-201ENSMUST00000028280 Gm19684G3UZ45 117 aa10.97□□□□□ -0.65
Col5a1-201ENSMUST00000028280 Ube2aQ9Z255 152 aa10.97□□□□□ -0.65
Col5a1-201ENSMUST00000028280 Fam216bQ8CC14 138 aa10.97□□□□□ -0.65
Col5a1-201ENSMUST00000028280 Nxph4G3X9N5 304 aa10.96□□□□□ -0.65
Col5a1-201ENSMUST00000028280 Ndufc1Q9CQY9 76 aa10.96□□□□□ -0.65
Col5a1-201ENSMUST00000028280 Timm17aQ9Z0V8 171 aa10.96□□□□□ -0.65
Col5a1-201ENSMUST00000028280 C920008G01RikA0A0B4J1N1 112 aa10.96□□□□□ -0.65
Col5a1-201ENSMUST00000028280 Ighv8-12A0A0G2JDE1 119 aa10.96□□□□□ -0.65
Col5a1-201ENSMUST00000028280 Igkv1-35A0A0G2JDE5 120 aa10.96□□□□□ -0.65
Col5a1-201ENSMUST00000028280 Rpl18aP62717 176 aaKnown RBP10.96□□□□□ -0.65
Col5a1-201ENSMUST00000028280 Trav9d-3A0A075B695 113 aa10.96□□□□□ -0.65
Col5a1-201ENSMUST00000028280 NpwA0A1L1STR8 176 aa10.96□□□□□ -0.65
Col5a1-201ENSMUST00000028280 Ccl21aP84444 133 aa10.96□□□□□ -0.65
Col5a1-201ENSMUST00000028280 Ccl21bP86792 133 aa10.96□□□□□ -0.65
Col5a1-201ENSMUST00000028280 Ccl21cP86793 133 aa10.96□□□□□ -0.65
Col5a1-201ENSMUST00000028280 Ighv1-62-1A0A075B5U3 116 aa10.96□□□□□ -0.66
Col5a1-201ENSMUST00000028280 Ighv1-50A0A075B5W1 117 aa10.96□□□□□ -0.66
Col5a1-201ENSMUST00000028280 Igkv3-4A0A140T8Q4 119 aa10.96□□□□□ -0.66
Col5a1-201ENSMUST00000028280 Mapk1ip1lQ8BH93 242 aa10.96□□□□□ -0.66
Col5a1-201ENSMUST00000028280 Ighv1-64A0A075B5X3 117 aa10.96□□□□□ -0.66
Col5a1-201ENSMUST00000028280 Col4a5Q63ZW6 1691 aa10.96□□□□□ -0.66
Col5a1-201ENSMUST00000028280 Zfp36P22893 319 aaKnown RBP10.95□□□□□ -0.66
Col5a1-201ENSMUST00000028280 Cox7a1P56392 80 aa10.95□□□□□ -0.66
Col5a1-201ENSMUST00000028280 1700012A03RikQ9DAF1 130 aa10.95□□□□□ -0.66
Col5a1-201ENSMUST00000028280 Tpsg1Q9QUL7 311 aa10.95□□□□□ -0.66
Col5a1-201ENSMUST00000028280 Igkv3-3A0A140T8Q0 119 aa10.95□□□□□ -0.66
Col5a1-201ENSMUST00000028280 Gm9961Q8BNV2 113 aa10.95□□□□□ -0.66
Col5a1-201ENSMUST00000028280 Prok2Q9QXU7 128 aa10.95□□□□□ -0.66
Col5a1-201ENSMUST00000028280 PrcdQ00LT2 53 aa10.95□□□□□ -0.66
Col5a1-201ENSMUST00000028280 Adamts20P59511 1906 aa10.94□□□□□ -0.66
Col5a1-201ENSMUST00000028280 Pcsk5Q04592 1877 aa10.94□□□□□ -0.66
Col5a1-201ENSMUST00000028280 Gm5129F6YHA9 99 aa10.94□□□□□ -0.66
Col5a1-201ENSMUST00000028280 Tmem210Q9D2F0 147 aa10.94□□□□□ -0.66
Col5a1-201ENSMUST00000028280 Igkv12-89A0A0G2JGW8 112 aa10.94□□□□□ -0.66
Col5a1-201ENSMUST00000028280 Trbv14A0A140T8L9 115 aa10.94□□□□□ -0.66
Col5a1-201ENSMUST00000028280 Ly6g6dQ9Z1Q3 135 aa10.94□□□□□ -0.66
Col5a1-201ENSMUST00000028280 Ppp1r32Q148A4 427 aa10.94□□□□□ -0.66
Col5a1-201ENSMUST00000028280 Ighv1-74A0A0G2JGK2 117 aa10.93□□□□□ -0.66
Col5a1-201ENSMUST00000028280 Pla2g2aP31482 146 aa10.93□□□□□ -0.66
Col5a1-201ENSMUST00000028280 Edn3P48299 214 aa10.93□□□□□ -0.66
Col5a1-201ENSMUST00000028280 Foxs1Q61574 329 aa10.93□□□□□ -0.66
Col5a1-201ENSMUST00000028280 Ighv1-4A0A075B5T4 117 aa10.93□□□□□ -0.66
Col5a1-201ENSMUST00000028280 Mrpl35Q9CQL6 188 aa10.93□□□□□ -0.66
Col5a1-201ENSMUST00000028280 9430069I07RikQ9CX21 111 aa10.93□□□□□ -0.66
Col5a1-201ENSMUST00000028280 Iglv1A0A075B663 117 aa10.92□□□□□ -0.66
Col5a1-201ENSMUST00000028280 AmelxP63277 210 aa10.92□□□□□ -0.66
Col5a1-201ENSMUST00000028280 Lhfpl1Q80SV1 220 aa10.92□□□□□ -0.66
Col5a1-201ENSMUST00000028280 Fhl4Q8CDC8 279 aa10.92□□□□□ -0.66
Col5a1-201ENSMUST00000028280 Trav14-1A0A0G2JF94 121 aa10.92□□□□□ -0.66
Retrieved 100 of 22,080 RNA–protein pairs in 63.9 ms