RNA–Protein interactions for RNA: ENSMUST00000021864.7

Ssr1-201, Transcript of Translocon-associated protein subunit alpha, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ssr1, Length 9,333 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1-201ENSMUST00000021864 Chd8Q09XV5 2582 aaKnown RBP6.47□□□□□ -1.37
Ssr1-201ENSMUST00000021864 Rbm3O89086 153 aaKnown RBP6.47□□□□□ -1.37
Ssr1-201ENSMUST00000021864 Trav9d-3A0A075B695 113 aa6.47□□□□□ -1.37
Ssr1-201ENSMUST00000021864 Camk2n2Q78WH7 79 aa6.47□□□□□ -1.37
Ssr1-201ENSMUST00000021864 Reg3bP35230 175 aa6.47□□□□□ -1.37
Ssr1-201ENSMUST00000021864 Defb29Q8BGW9 78 aa6.47□□□□□ -1.37
Ssr1-201ENSMUST00000021864 Cysrt1Q9D1E4 142 aa6.47□□□□□ -1.37
Ssr1-201ENSMUST00000021864 Foxl2O88470 375 aa6.47□□□□□ -1.37
Ssr1-201ENSMUST00000021864 Gm26558Q8BLW8 286 aa6.47□□□□□ -1.37
Ssr1-201ENSMUST00000021864 Lst1O08843 95 aa6.47□□□□□ -1.37
Ssr1-201ENSMUST00000021864 Igll1P20764 209 aa6.47□□□□□ -1.37
Ssr1-201ENSMUST00000021864 Rmi2Q3UPE3 149 aa6.47□□□□□ -1.37
Ssr1-201ENSMUST00000021864 Trav9-2A0A075B647 113 aa6.46□□□□□ -1.37
Ssr1-201ENSMUST00000021864 Trav9-4A0A0B4J1K2 113 aa6.46□□□□□ -1.37
Ssr1-201ENSMUST00000021864 Tomm6Q9CQN3 74 aa6.46□□□□□ -1.37
Ssr1-201ENSMUST00000021864 Them7Q9DCP4 223 aa6.46□□□□□ -1.37
Ssr1-201ENSMUST00000021864 Timm17aQ9Z0V8 171 aa6.46□□□□□ -1.37
Ssr1-201ENSMUST00000021864 Fam222aQ6PGH4 453 aa6.46□□□□□ -1.37
Ssr1-201ENSMUST00000021864 Gm37389A0A0A6YW05 95 aa6.46□□□□□ -1.38
Ssr1-201ENSMUST00000021864 Inafm1E9PV59 130 aa6.46□□□□□ -1.38
Ssr1-201ENSMUST00000021864 P01790 122 aa6.46□□□□□ -1.38
Ssr1-201ENSMUST00000021864 P01792 123 aa6.46□□□□□ -1.38
Ssr1-201ENSMUST00000021864 Trav4d-3A0A075B625 110 aa6.46□□□□□ -1.38
Ssr1-201ENSMUST00000021864 Hoxb4P10284 250 aa6.46□□□□□ -1.38
Ssr1-201ENSMUST00000021864 Igkv12-89A0A0G2JGW8 112 aa6.46□□□□□ -1.38
Ssr1-201ENSMUST00000021864 FshbQ60687 130 aa6.46□□□□□ -1.38
Ssr1-201ENSMUST00000021864 Ociad2Q9D8W7 154 aa6.46□□□□□ -1.38
Ssr1-201ENSMUST00000021864 Pcp4P63054 62 aa6.45□□□□□ -1.38
Ssr1-201ENSMUST00000021864 Ighv1-12A0A0A6YXJ9 117 aa6.45□□□□□ -1.38
Ssr1-201ENSMUST00000021864 Tmem243B2RVB9 118 aa6.45□□□□□ -1.38
Ssr1-201ENSMUST00000021864 Gm9936Q8C864 160 aa6.45□□□□□ -1.38
Ssr1-201ENSMUST00000021864 Tmem223Q9CQE2 199 aaKnown RBP6.45□□□□□ -1.38
Ssr1-201ENSMUST00000021864 Pla2g2cP48076 150 aa6.45□□□□□ -1.38
Ssr1-201ENSMUST00000021864 Odf1Q61999 247 aa6.45□□□□□ -1.38
Ssr1-201ENSMUST00000021864 Q80X32 188 aaKnown RBP6.45□□□□□ -1.38
Ssr1-201ENSMUST00000021864 Trbv14A0A140T8L9 115 aa6.45□□□□□ -1.38
Ssr1-201ENSMUST00000021864 Gm17455G3UW87 128 aa6.45□□□□□ -1.38
Ssr1-201ENSMUST00000021864 Gm9913Q8BQQ2 135 aa6.45□□□□□ -1.38
Ssr1-201ENSMUST00000021864 Gm4707V9GXN5 68 aa6.45□□□□□ -1.38
Ssr1-201ENSMUST00000021864 BC067074F6RXI4 2391 aa6.45□□□□□ -1.38
Ssr1-201ENSMUST00000021864 Pom121l2Q5SW25 972 aa6.45□□□□□ -1.38
Ssr1-201ENSMUST00000021864 Msrb3Q8BU85 253 aa6.45□□□□□ -1.38
Ssr1-201ENSMUST00000021864 Mustn1Q99JI1 82 aa6.45□□□□□ -1.38
Ssr1-201ENSMUST00000021864 Igkv8-21A0A140T8P7 120 aa6.44□□□□□ -1.38
Ssr1-201ENSMUST00000021864 Gm3618D3Z4P5 127 aa6.44□□□□□ -1.38
Ssr1-201ENSMUST00000021864 Gm10518F6UQQ9 182 aa6.44□□□□□ -1.38
Ssr1-201ENSMUST00000021864 P01630 113 aa6.44□□□□□ -1.38
Ssr1-201ENSMUST00000021864 U90926O08546 118 aa6.44□□□□□ -1.38
Ssr1-201ENSMUST00000021864 Znf664Q4VA44 261 aa6.44□□□□□ -1.38
Ssr1-201ENSMUST00000021864 Igkv2-137A0A0B4J1H6 120 aa6.44□□□□□ -1.38
Ssr1-201ENSMUST00000021864 Gm12169F2Z474 250 aa6.44□□□□□ -1.38
Ssr1-201ENSMUST00000021864 P18528 98 aa6.44□□□□□ -1.38
Ssr1-201ENSMUST00000021864 Ighv8-2A0A0A6YW58 119 aa6.44□□□□□ -1.38
Ssr1-201ENSMUST00000021864 Smim20D3Z7Q2 69 aa6.44□□□□□ -1.38
Ssr1-201ENSMUST00000021864 Q08AU9 97 aa6.44□□□□□ -1.38
Ssr1-201ENSMUST00000021864 Fgf6P21658 208 aa6.43□□□□□ -1.38
Ssr1-201ENSMUST00000021864 Gm20730A0A075B5J6 119 aa6.43□□□□□ -1.38
Ssr1-201ENSMUST00000021864 Iglv1A0A075B663 117 aa6.43□□□□□ -1.38
Ssr1-201ENSMUST00000021864 Mrps12O35680 139 aa6.43□□□□□ -1.38
Ssr1-201ENSMUST00000021864 Igkv3-3A0A140T8Q0 119 aa6.43□□□□□ -1.38
Ssr1-201ENSMUST00000021864 Tm2d1Q99MB3 208 aa6.43□□□□□ -1.38
Ssr1-201ENSMUST00000021864 Fxyd1Q9Z239 92 aa6.43□□□□□ -1.38
Ssr1-201ENSMUST00000021864 Ighv1-77A0A0G2JGS9 117 aa6.43□□□□□ -1.38
Ssr1-201ENSMUST00000021864 Ebi3O35228 228 aa6.43□□□□□ -1.38
Ssr1-201ENSMUST00000021864 Ccl25O35903 144 aa6.43□□□□□ -1.38
Ssr1-201ENSMUST00000021864 P01750 117 aa6.42□□□□□ -1.38
Ssr1-201ENSMUST00000021864 P01643 108 aa6.42□□□□□ -1.38
Ssr1-201ENSMUST00000021864 P04940 107 aa6.42□□□□□ -1.38
Ssr1-201ENSMUST00000021864 P04941 107 aa6.42□□□□□ -1.38
Ssr1-201ENSMUST00000021864 1500011B03RikQ3TTH7 73 aa6.42□□□□□ -1.38
Ssr1-201ENSMUST00000021864 Pde6gP09174 87 aa6.42□□□□□ -1.38
Ssr1-201ENSMUST00000021864 Ighv12-3A0A075B5T1 117 aa6.42□□□□□ -1.38
Ssr1-201ENSMUST00000021864 Runx1Q03347 451 aa6.42□□□□□ -1.38
Ssr1-201ENSMUST00000021864 Gm17577J3QNF7 156 aa6.42□□□□□ -1.38
Ssr1-201ENSMUST00000021864 Rnase1P00683 149 aa6.42□□□□□ -1.38
Ssr1-201ENSMUST00000021864 Ly6gP35461 111 aa6.42□□□□□ -1.38
Ssr1-201ENSMUST00000021864 Fxyd5P97808 178 aa6.42□□□□□ -1.38
Ssr1-201ENSMUST00000021864 Prh1P05142 261 aa6.42□□□□□ -1.38
Ssr1-201ENSMUST00000021864 MifP34884 115 aaKnown RBP6.42□□□□□ -1.38
Ssr1-201ENSMUST00000021864 Trav9n-2A0A0G2JDP3 113 aa6.42□□□□□ -1.38
Ssr1-201ENSMUST00000021864 Igkv1-88A0A140T8N1 120 aa6.42□□□□□ -1.38
Ssr1-201ENSMUST00000021864 Gm10647E9Q8X0 124 aa6.42□□□□□ -1.38
Ssr1-201ENSMUST00000021864 Abca2P41234 2434 aa6.42□□□□□ -1.38
Ssr1-201ENSMUST00000021864 9430097D07RikQ8BS47 195 aa6.42□□□□□ -1.38
Ssr1-201ENSMUST00000021864 Ndufb4Q9CQC7 129 aa6.42□□□□□ -1.38
Ssr1-201ENSMUST00000021864 Higd2aQ9CQJ1 106 aa6.42□□□□□ -1.38
Ssr1-201ENSMUST00000021864 P01789 122 aa6.41□□□□□ -1.38
Ssr1-201ENSMUST00000021864 Spag11Q8K4N2 71 aa6.41□□□□□ -1.38
Ssr1-201ENSMUST00000021864 Vpreb3D3Z6J4 130 aa6.41□□□□□ -1.38
Ssr1-201ENSMUST00000021864 Znrf2Q71FD5 238 aa6.41□□□□□ -1.38
Ssr1-201ENSMUST00000021864 Spry2Q9QXV8 315 aa6.41□□□□□ -1.38
Ssr1-201ENSMUST00000021864 Gm10553J3QPF1 123 aa6.41□□□□□ -1.38
Ssr1-201ENSMUST00000021864 Fancd2osQ9D4K4 178 aa6.41□□□□□ -1.38
Ssr1-201ENSMUST00000021864 Mbd6Q3TY92 1003 aa6.41□□□□□ -1.38
Ssr1-201ENSMUST00000021864 Prp2P05143 317 aa6.41□□□□□ -1.38
Ssr1-201ENSMUST00000021864 SprnQ8BWU1 147 aa6.41□□□□□ -1.38
Ssr1-201ENSMUST00000021864 Acyp1P56376 99 aa6.4□□□□□ -1.38
Ssr1-201ENSMUST00000021864 Glrp1E9Q9S8 174 aa6.4□□□□□ -1.38
Ssr1-201ENSMUST00000021864 Naa38Q9D2U5 125 aa6.4□□□□□ -1.38
Ssr1-201ENSMUST00000021864 Zic4Q61467 341 aa6.4□□□□□ -1.38
Retrieved 100 of 22,080 RNA–protein pairs in 125.6 ms