RNA–Protein interactions for RNA: ENSMUST00000145482.7

Prpf40b-212, Transcript of Pre-mRNA-processing factor 40 homolog B, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Prpf40b, Length 3,308 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40b-212ENSMUST00000145482 Ighv1-55A0A075B5W6 117 aa12.5□□□□□ -0.41
Prpf40b-212ENSMUST00000145482 Gm28539A0A087WSL9 92 aa12.5□□□□□ -0.41
Prpf40b-212ENSMUST00000145482 CntfrO88507 372 aa12.5□□□□□ -0.41
Prpf40b-212ENSMUST00000145482 Ifitm10Q8BR26 201 aa12.5□□□□□ -0.41
Prpf40b-212ENSMUST00000145482 P01811 117 aa12.49□□□□□ -0.41
Prpf40b-212ENSMUST00000145482 Ubtd1Q91WB7 227 aa12.49□□□□□ -0.41
Prpf40b-212ENSMUST00000145482 Gkn1Q9CR36 201 aa12.49□□□□□ -0.41
Prpf40b-212ENSMUST00000145482 Tmem219Q9D123 240 aa12.49□□□□□ -0.41
Prpf40b-212ENSMUST00000145482 Gm45717A0A1B0GT68 152 aa12.49□□□□□ -0.41
Prpf40b-212ENSMUST00000145482 S100a4P07091 101 aa12.49□□□□□ -0.41
Prpf40b-212ENSMUST00000145482 4930596D02RikQ3V0H9 216 aa12.49□□□□□ -0.41
Prpf40b-212ENSMUST00000145482 RpeQ8VEE0 228 aa12.49□□□□□ -0.41
Prpf40b-212ENSMUST00000145482 Ighv1-37A0A0A6YW32 117 aa12.48□□□□□ -0.41
Prpf40b-212ENSMUST00000145482 Igkv4-81A0A0G2JEY5 119 aa12.48□□□□□ -0.41
Prpf40b-212ENSMUST00000145482 ColqO35348 457 aa12.48□□□□□ -0.41
Prpf40b-212ENSMUST00000145482 Smim1P0C8K7 78 aa12.48□□□□□ -0.41
Prpf40b-212ENSMUST00000145482 Mrps21P58059 87 aa12.48□□□□□ -0.41
Prpf40b-212ENSMUST00000145482 Gm10192Q3V0S1 108 aa12.48□□□□□ -0.41
Prpf40b-212ENSMUST00000145482 Trav7d-3Q5R1I1 112 aa12.48□□□□□ -0.41
Prpf40b-212ENSMUST00000145482 Samd10Q7TST3 202 aa12.48□□□□□ -0.41
Prpf40b-212ENSMUST00000145482 Stpg1Q9D2F5 341 aa12.48□□□□□ -0.41
Prpf40b-212ENSMUST00000145482 Ovol1Q9WTJ2 267 aa12.48□□□□□ -0.41
Prpf40b-212ENSMUST00000145482 Gm12845A0A0N4SUM5 588 aa12.47□□□□□ -0.41
Prpf40b-212ENSMUST00000145482 Srsf1Q6PDM2 248 aaKnown RBP12.47□□□□□ -0.41
Prpf40b-212ENSMUST00000145482 Tcrg-C3L7N479 172 aa12.47□□□□□ -0.41
Prpf40b-212ENSMUST00000145482 P03985 172 aa12.47□□□□□ -0.41
Prpf40b-212ENSMUST00000145482 Rpl32P62911 135 aaKnown RBP12.47□□□□□ -0.41
Prpf40b-212ENSMUST00000145482 Cdkn1aP39689 159 aa12.47□□□□□ -0.41
Prpf40b-212ENSMUST00000145482 Zfp248Q640N4 576 aa12.47□□□□□ -0.41
Prpf40b-212ENSMUST00000145482 Spink6Q8BT20 105 aa12.47□□□□□ -0.41
Prpf40b-212ENSMUST00000145482 Gm28038F7BCN9 126 aa12.46□□□□□ -0.41
Prpf40b-212ENSMUST00000145482 Znf239P24399 201 aa12.46□□□□□ -0.41
Prpf40b-212ENSMUST00000145482 Dlx6P70397 175 aa12.46□□□□□ -0.41
Prpf40b-212ENSMUST00000145482 Rpl11Q9CXW4 178 aaKnown RBP12.46□□□□□ -0.41
Prpf40b-212ENSMUST00000145482 Spint3Q3UW09 88 aa12.46□□□□□ -0.42
Prpf40b-212ENSMUST00000145482 Gm5464Q3UY29 175 aa12.46□□□□□ -0.42
Prpf40b-212ENSMUST00000145482 P04944 107 aa12.45□□□□□ -0.42
Prpf40b-212ENSMUST00000145482 Tep1P97499 2629 aa12.45□□□□□ -0.42
Prpf40b-212ENSMUST00000145482 Q5BN45 167 aa12.45□□□□□ -0.42
Prpf40b-212ENSMUST00000145482 Ndufa3Q9CQ91 84 aa12.45□□□□□ -0.42
Prpf40b-212ENSMUST00000145482 Ly86O88188 162 aa12.45□□□□□ -0.42
Prpf40b-212ENSMUST00000145482 Triap1Q9D8Z2 76 aa12.45□□□□□ -0.42
Prpf40b-212ENSMUST00000145482 Rbmy1bQ60990 380 aa12.44□□□□□ -0.42
Prpf40b-212ENSMUST00000145482 Gm10118Q8C8J5 116 aa12.44□□□□□ -0.42
Prpf40b-212ENSMUST00000145482 Ighv1-81A0A075B5Y4 117 aa12.44□□□□□ -0.42
Prpf40b-212ENSMUST00000145482 Gm17727E9Q4V7 109 aa12.44□□□□□ -0.42
Prpf40b-212ENSMUST00000145482 Defa26Q3L180 93 aa12.44□□□□□ -0.42
Prpf40b-212ENSMUST00000145482 SrarpQ3ULG3 163 aa12.44□□□□□ -0.42
Prpf40b-212ENSMUST00000145482 OtosQ8R448 89 aa12.44□□□□□ -0.42
Prpf40b-212ENSMUST00000145482 Gemin7Q9CWY4 129 aa12.44□□□□□ -0.42
Prpf40b-212ENSMUST00000145482 Ighv14-2A0A075B5R7 117 aa12.44□□□□□ -0.42
Prpf40b-212ENSMUST00000145482 Smim10l1A0A087WNQ7 89 aa12.44□□□□□ -0.42
Prpf40b-212ENSMUST00000145482 Crip2Q9DCT8 208 aaKnown RBP12.44□□□□□ -0.42
Prpf40b-212ENSMUST00000145482 GlrxQ9QUH0 107 aa12.44□□□□□ -0.42
Prpf40b-212ENSMUST00000145482 C920008G01RikA0A0B4J1N1 112 aa12.43□□□□□ -0.42
Prpf40b-212ENSMUST00000145482 Gm17455G3UW87 128 aa12.43□□□□□ -0.42
Prpf40b-212ENSMUST00000145482 Casp6O08738 276 aa12.43□□□□□ -0.42
Prpf40b-212ENSMUST00000145482 Trav19A0A0B4J1K4 119 aa12.43□□□□□ -0.42
Prpf40b-212ENSMUST00000145482 P06334 169 aa12.43□□□□□ -0.42
Prpf40b-212ENSMUST00000145482 Abca2P41234 2434 aa12.43□□□□□ -0.42
Prpf40b-212ENSMUST00000145482 Rnf5O35445 180 aa12.42□□□□□ -0.42
Prpf40b-212ENSMUST00000145482 SNORCQ9CXL7 121 aa12.42□□□□□ -0.42
Prpf40b-212ENSMUST00000145482 FlncQ8VHX6 2726 aaKnown RBP12.42□□□□□ -0.42
Prpf40b-212ENSMUST00000145482 Hcfc1Q61191 2045 aaKnown RBP12.42□□□□□ -0.42
Prpf40b-212ENSMUST00000145482 Psmg4P0C7N9 123 aa12.42□□□□□ -0.42
Prpf40b-212ENSMUST00000145482 Igkv4-90A0A075B5L3 117 aa12.41□□□□□ -0.42
Prpf40b-212ENSMUST00000145482 Arpc1aQ9R0Q6 370 aa12.41□□□□□ -0.42
Prpf40b-212ENSMUST00000145482 Ins2P01326 110 aa12.41□□□□□ -0.42
Prpf40b-212ENSMUST00000145482 Foxi2Q3I5G5 311 aa12.41□□□□□ -0.42
Prpf40b-212ENSMUST00000145482 Utp20Q5XG71 2788 aaKnown RBP12.41□□□□□ -0.42
Prpf40b-212ENSMUST00000145482 P01837 106 aa12.4□□□□□ -0.42
Prpf40b-212ENSMUST00000145482 Spata46Q4FZF2 204 aa12.4□□□□□ -0.42
Prpf40b-212ENSMUST00000145482 Gm29423A0A087WRM1 55 aa12.4□□□□□ -0.42
Prpf40b-212ENSMUST00000145482 Gp9O88186 177 aa12.4□□□□□ -0.42
Prpf40b-212ENSMUST00000145482 Defa4P28311 92 aa12.4□□□□□ -0.42
Prpf40b-212ENSMUST00000145482 RetnQ99P87 114 aa12.4□□□□□ -0.42
Prpf40b-212ENSMUST00000145482 Pygo1Q9D0P5 417 aa12.4□□□□□ -0.42
Prpf40b-212ENSMUST00000145482 Atp5g3P56384 141 aa12.39□□□□□ -0.43
Prpf40b-212ENSMUST00000145482 Rpl39P62892 51 aa12.39□□□□□ -0.43
Prpf40b-212ENSMUST00000145482 Gm10767Q3TQP0 103 aa12.39□□□□□ -0.43
Prpf40b-212ENSMUST00000145482 Cyyr1Q8VIH7 165 aa12.39□□□□□ -0.43
Prpf40b-212ENSMUST00000145482 Fam216bQ8CC14 138 aa12.39□□□□□ -0.43
Prpf40b-212ENSMUST00000145482 Il1f10Q8R459 152 aa12.39□□□□□ -0.43
Prpf40b-212ENSMUST00000145482 Snai3Q9QY31 287 aa12.39□□□□□ -0.43
Prpf40b-212ENSMUST00000145482 Smrp1Q2MH31 260 aa12.39□□□□□ -0.43
Prpf40b-212ENSMUST00000145482 Hspe1Q64433 102 aaKnown RBP12.39□□□□□ -0.43
Prpf40b-212ENSMUST00000145482 Mrpl36Q99N90 102 aa12.39□□□□□ -0.43
Prpf40b-212ENSMUST00000145482 HampQ9EQ21 83 aa12.39□□□□□ -0.43
Prpf40b-212ENSMUST00000145482 Usp9xP70398 2559 aaKnown RBP12.39□□□□□ -0.43
Prpf40b-212ENSMUST00000145482 P01739 132 aa12.38□□□□□ -0.43
Prpf40b-212ENSMUST00000145482 Trav7-6A0A075B640 112 aa12.37□□□□□ -0.43
Prpf40b-212ENSMUST00000145482 Sdhaf1Q3U276 118 aa12.37□□□□□ -0.43
Prpf40b-212ENSMUST00000145482 Gm10135F6TEE5 83 aa12.37□□□□□ -0.43
Prpf40b-212ENSMUST00000145482 Gm933J3QPC1 141 aa12.37□□□□□ -0.43
Prpf40b-212ENSMUST00000145482 P01812 117 aa12.37□□□□□ -0.43
Prpf40b-212ENSMUST00000145482 Gm26938S4R185 226 aa12.37□□□□□ -0.43
Prpf40b-212ENSMUST00000145482 Gm33815A0A087WNV3 176 aa12.37□□□□□ -0.43
Prpf40b-212ENSMUST00000145482 Sumo2P61957 95 aaKnown RBP12.37□□□□□ -0.43
Prpf40b-212ENSMUST00000145482 Cdx4Q07424 282 aa12.37□□□□□ -0.43
Prpf40b-212ENSMUST00000145482 Znf575Q3TXZ1 239 aa12.37□□□□□ -0.43
Retrieved 100 of 22,080 RNA–protein pairs in 47.1 ms