RNA–Protein interactions for RNA: ENSMUST00000111042.2

Bdnf-202, Transcript of Brain-derived neurotrophic factor, mousemouse

TSL 1 (best) BASIC

Gene Bdnf, Length 3,905 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-202ENSMUST00000111042 Tmem88bQ3TYP4 173 aa6.35□□□□□ -1.39
Bdnf-202ENSMUST00000111042 Gng7Q61016 68 aa6.35□□□□□ -1.39
Bdnf-202ENSMUST00000111042 Cd33Q63994 403 aa6.35□□□□□ -1.39
Bdnf-202ENSMUST00000111042 Atp6v0bQ91V37 205 aa6.35□□□□□ -1.39
Bdnf-202ENSMUST00000111042 Trbv30A0A0B4J1P1 111 aa6.35□□□□□ -1.39
Bdnf-202ENSMUST00000111042 Trbv13-1A0A0B4J1P8 112 aa6.35□□□□□ -1.39
Bdnf-202ENSMUST00000111042 Ccl21aP84444 133 aa6.35□□□□□ -1.39
Bdnf-202ENSMUST00000111042 Ccl21bP86792 133 aa6.35□□□□□ -1.39
Bdnf-202ENSMUST00000111042 Ccl21cP86793 133 aa6.35□□□□□ -1.39
Bdnf-202ENSMUST00000111042 Cphx2Q8BX39 182 aa6.35□□□□□ -1.39
Bdnf-202ENSMUST00000111042 Gnb1lQ9EQ15 326 aa6.35□□□□□ -1.39
Bdnf-202ENSMUST00000111042 Arid1bE9Q4N7 2244 aa6.35□□□□□ -1.39
Bdnf-202ENSMUST00000111042 MtorQ9JLN9 2549 aa6.35□□□□□ -1.39
Bdnf-202ENSMUST00000111042 Gm7849D3YX03 116 aa6.35□□□□□ -1.39
Bdnf-202ENSMUST00000111042 Ly86O88188 162 aa6.35□□□□□ -1.39
Bdnf-202ENSMUST00000111042 Defa24Q5G865 93 aa6.35□□□□□ -1.39
Bdnf-202ENSMUST00000111042 Brd3osA0A1B0GRB6 84 aa6.34□□□□□ -1.39
Bdnf-202ENSMUST00000111042 Reg3gO09049 174 aa6.34□□□□□ -1.39
Bdnf-202ENSMUST00000111042 Spink12Q9D256 87 aa6.34□□□□□ -1.39
Bdnf-202ENSMUST00000111042 Tex48Q9DA81 110 aa6.34□□□□□ -1.39
Bdnf-202ENSMUST00000111042 Higd1aQ9JLR9 95 aa6.34□□□□□ -1.39
Bdnf-202ENSMUST00000111042 Olfr311Q5NC59 308 aa6.34□□□□□ -1.39
Bdnf-202ENSMUST00000111042 Try10Q792Z1 246 aaKnown RBP6.34□□□□□ -1.39
Bdnf-202ENSMUST00000111042 Srsf2Q62093 221 aaKnown RBP6.34□□□□□ -1.39
Bdnf-202ENSMUST00000111042 Ube2e2Q91W82 201 aa6.34□□□□□ -1.39
Bdnf-202ENSMUST00000111042 Rnf185Q91YT2 192 aa6.34□□□□□ -1.39
Bdnf-202ENSMUST00000111042 Ighv2-7A0A075B5Q8 116 aa6.33□□□□□ -1.4
Bdnf-202ENSMUST00000111042 TtrP07309 147 aa6.33□□□□□ -1.4
Bdnf-202ENSMUST00000111042 Trav7-2Q5R1I3 112 aa6.33□□□□□ -1.4
Bdnf-202ENSMUST00000111042 Trdv5A0A075B661 115 aa6.33□□□□□ -1.4
Bdnf-202ENSMUST00000111042 Igkv4-59A0A0B4J1I8 117 aa6.33□□□□□ -1.4
Bdnf-202ENSMUST00000111042 MdfiP70331 251 aa6.33□□□□□ -1.4
Bdnf-202ENSMUST00000111042 4930596D02RikQ3V0H9 216 aa6.33□□□□□ -1.4
Bdnf-202ENSMUST00000111042 BC106179Q8C9L1 186 aa6.33□□□□□ -1.4
Bdnf-202ENSMUST00000111042 Ndufb4Q9CQC7 129 aa6.33□□□□□ -1.4
Bdnf-202ENSMUST00000111042 Tax1bp3Q9DBG9 124 aa6.33□□□□□ -1.4
Bdnf-202ENSMUST00000111042 Rs1Q9Z1L4 224 aa6.33□□□□□ -1.4
Bdnf-202ENSMUST00000111042 Nbeal1E9PYP2 2688 aa6.33□□□□□ -1.4
Bdnf-202ENSMUST00000111042 Gm35549A0A0N4SUS7 141 aa6.33□□□□□ -1.4
Bdnf-202ENSMUST00000111042 Hbb-bsA8DUK4 147 aa6.33□□□□□ -1.4
Bdnf-202ENSMUST00000111042 Esp4A8R0T8 117 aa6.33□□□□□ -1.4
Bdnf-202ENSMUST00000111042 Hbb-b1P02088 147 aa6.33□□□□□ -1.4
Bdnf-202ENSMUST00000111042 Synj2bpQ9D6K5 145 aa6.33□□□□□ -1.4
Bdnf-202ENSMUST00000111042 Plac1Q9JI83 173 aa6.33□□□□□ -1.4
Bdnf-202ENSMUST00000111042 Ighv2-6A0A075B6A7 116 aa6.32□□□□□ -1.4
Bdnf-202ENSMUST00000111042 P01747 120 aa6.32□□□□□ -1.4
Bdnf-202ENSMUST00000111042 SbpP15501 199 aa6.32□□□□□ -1.4
Bdnf-202ENSMUST00000111042 H2-DMb1P35737 261 aa6.32□□□□□ -1.4
Bdnf-202ENSMUST00000111042 Gm10604Q3V0X7 143 aa6.32□□□□□ -1.4
Bdnf-202ENSMUST00000111042 Ss18Q62280 418 aa6.32□□□□□ -1.4
Bdnf-202ENSMUST00000111042 GalmQ8K157 342 aa6.32□□□□□ -1.4
Bdnf-202ENSMUST00000111042 RelnQ60841 3461 aa6.32□□□□□ -1.4
Bdnf-202ENSMUST00000111042 Gm7075D3Z497 112 aa6.32□□□□□ -1.4
Bdnf-202ENSMUST00000111042 Tcrg-C3L7N479 172 aa6.32□□□□□ -1.4
Bdnf-202ENSMUST00000111042 P03985 172 aa6.32□□□□□ -1.4
Bdnf-202ENSMUST00000111042 NpsP0C0P8 89 aa6.32□□□□□ -1.4
Bdnf-202ENSMUST00000111042 FshbQ60687 130 aa6.32□□□□□ -1.4
Bdnf-202ENSMUST00000111042 Phlda3Q9WV95 125 aa6.32□□□□□ -1.4
Bdnf-202ENSMUST00000111042 Ighv5-9-1A0A0A6YVS4 126 aa6.32□□□□□ -1.4
Bdnf-202ENSMUST00000111042 Bak1O08734 209 aa6.32□□□□□ -1.4
Bdnf-202ENSMUST00000111042 Gm10226O88253 85 aa6.32□□□□□ -1.4
Bdnf-202ENSMUST00000111042 Igkv2-137A0A0B4J1H6 120 aa6.31□□□□□ -1.4
Bdnf-202ENSMUST00000111042 Gm5089A1L3C8 106 aa6.31□□□□□ -1.4
Bdnf-202ENSMUST00000111042 Gm2564F6Z9S8 108 aa6.31□□□□□ -1.4
Bdnf-202ENSMUST00000111042 Ccl19O70460 108 aa6.31□□□□□ -1.4
Bdnf-202ENSMUST00000111042 Ifitm10Q8BR26 201 aa6.31□□□□□ -1.4
Bdnf-202ENSMUST00000111042 Cdpf1Q8R3A2 119 aa6.31□□□□□ -1.4
Bdnf-202ENSMUST00000111042 Vsig4F6TUL9 280 aa6.31□□□□□ -1.4
Bdnf-202ENSMUST00000111042 Socs3O35718 225 aa6.31□□□□□ -1.4
Bdnf-202ENSMUST00000111042 P0C913 63 aa6.31□□□□□ -1.4
Bdnf-202ENSMUST00000111042 Prr9Q8BV84 116 aa6.31□□□□□ -1.4
Bdnf-202ENSMUST00000111042 Gm9513B3GLJ6 99 aa6.31□□□□□ -1.4
Bdnf-202ENSMUST00000111042 Gm20499D3Z4G5 72 aa6.31□□□□□ -1.4
Bdnf-202ENSMUST00000111042 Vamp8O70404 101 aa6.31□□□□□ -1.4
Bdnf-202ENSMUST00000111042 P01753 117 aa6.31□□□□□ -1.4
Bdnf-202ENSMUST00000111042 P01802 115 aa6.31□□□□□ -1.4
Bdnf-202ENSMUST00000111042 P06328 117 aa6.31□□□□□ -1.4
Bdnf-202ENSMUST00000111042 Olfr313Q5NC55 308 aa6.31□□□□□ -1.4
Bdnf-202ENSMUST00000111042 Gm1553Q66VB7 94 aa6.31□□□□□ -1.4
Bdnf-202ENSMUST00000111042 Clec4b2Q67DU8 208 aa6.31□□□□□ -1.4
Bdnf-202ENSMUST00000111042 Ifi27l2aQ8R412 90 aa6.31□□□□□ -1.4
Bdnf-202ENSMUST00000111042 Bex1Q9R224 128 aa6.31□□□□□ -1.4
Bdnf-202ENSMUST00000111042 Arhgap32Q811P8 2089 aa6.31□□□□□ -1.4
Bdnf-202ENSMUST00000111042 1810032O08RikE9PZV8 113 aa6.31□□□□□ -1.4
Bdnf-202ENSMUST00000111042 Chac1Q8R3J5 223 aa6.31□□□□□ -1.4
Bdnf-202ENSMUST00000111042 Smim10l1A0A087WNQ7 89 aa6.3□□□□□ -1.4
Bdnf-202ENSMUST00000111042 Igkv4-74A0A0B4J1I3 119 aa6.3□□□□□ -1.4
Bdnf-202ENSMUST00000111042 Gm45521A0A1B0GRK0 198 aa6.3□□□□□ -1.4
Bdnf-202ENSMUST00000111042 Esp24A8R0V6 68 aa6.3□□□□□ -1.4
Bdnf-202ENSMUST00000111042 Sap30O88574 220 aa6.3□□□□□ -1.4
Bdnf-202ENSMUST00000111042 Gm21370Q3T9V6 190 aa6.3□□□□□ -1.4
Bdnf-202ENSMUST00000111042 Shisa9Q9CZN4 424 aa6.3□□□□□ -1.4
Bdnf-202ENSMUST00000111042 Pradc1Q9D9N8 188 aa6.3□□□□□ -1.4
Bdnf-202ENSMUST00000111042 Wfdc2Q9DAU7 174 aa6.3□□□□□ -1.4
Bdnf-202ENSMUST00000111042 Nat8b-psE0CYC6 232 aa6.3□□□□□ -1.4
Bdnf-202ENSMUST00000111042 CrxO54751 299 aa6.3□□□□□ -1.4
Bdnf-202ENSMUST00000111042 PolP10400 120 aa6.3□□□□□ -1.4
Bdnf-202ENSMUST00000111042 S100a8P27005 89 aa6.3□□□□□ -1.4
Bdnf-202ENSMUST00000111042 Gm10775Q3V290 127 aa6.3□□□□□ -1.4
Bdnf-202ENSMUST00000111042 Igkv4-71A0A0G2JEH0 117 aa6.3□□□□□ -1.4
Retrieved 100 of 22,080 RNA–protein pairs in 39.9 ms