RNA–Protein interactions for RNA: ENSMUST00000106441.7

Trim47-202, Transcript of Tripartite motif-containing protein 47, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trim47, Length 2,192 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47-202ENSMUST00000106441 P06330 118 aa13.93□□□□□ -0.18
Trim47-202ENSMUST00000106441 Tcl1b4P56844 120 aa13.93□□□□□ -0.18
Trim47-202ENSMUST00000106441 1700067P10RikG3X8U2 183 aa13.92□□□□□ -0.18
Trim47-202ENSMUST00000106441 Socs3O35718 225 aa13.92□□□□□ -0.18
Trim47-202ENSMUST00000106441 Spock3Q8BKV0 436 aa13.92□□□□□ -0.18
Trim47-202ENSMUST00000106441 Spink2Q8BMY7 86 aa13.92□□□□□ -0.18
Trim47-202ENSMUST00000106441 Chac1Q8R3J5 223 aa13.92□□□□□ -0.18
Trim47-202ENSMUST00000106441 Atp6v0bQ91V37 205 aa13.92□□□□□ -0.18
Trim47-202ENSMUST00000106441 ApomQ9Z1R3 190 aa13.92□□□□□ -0.18
Trim47-202ENSMUST00000106441 Tcf24V9GWT9 166 aa13.92□□□□□ -0.18
Trim47-202ENSMUST00000106441 Gm17727E9Q4V7 109 aa13.91□□□□□ -0.18
Trim47-202ENSMUST00000106441 Cdx4Q07424 282 aa13.91□□□□□ -0.18
Trim47-202ENSMUST00000106441 BC048562Q80ZQ7 204 aa13.91□□□□□ -0.18
Trim47-202ENSMUST00000106441 Rbfox3Q8BIF2 374 aa13.91□□□□□ -0.18
Trim47-202ENSMUST00000106441 Ins1P01325 108 aa13.9□□□□□ -0.18
Trim47-202ENSMUST00000106441 P01801 115 aa13.9□□□□□ -0.18
Trim47-202ENSMUST00000106441 Spink10Q8CAC8 162 aa13.9□□□□□ -0.18
Trim47-202ENSMUST00000106441 Snai3Q9QY31 287 aa13.9□□□□□ -0.18
Trim47-202ENSMUST00000106441 Ighv1-74A0A0G2JGK2 117 aa13.9□□□□□ -0.18
Trim47-202ENSMUST00000106441 Mettl26Q9DCS2 204 aa13.9□□□□□ -0.18
Trim47-202ENSMUST00000106441 Nit2Q9JHW2 276 aa13.9□□□□□ -0.18
Trim47-202ENSMUST00000106441 Gm17334Q8C6U3 126 aa13.89□□□□□ -0.19
Trim47-202ENSMUST00000106441 Spata45Q9CVW4 97 aa13.89□□□□□ -0.19
Trim47-202ENSMUST00000106441 AY761184Q9D848 116 aa13.89□□□□□ -0.19
Trim47-202ENSMUST00000106441 Defa37K9J724 93 aa13.89□□□□□ -0.19
Trim47-202ENSMUST00000106441 Ndufa1O35683 70 aa13.89□□□□□ -0.19
Trim47-202ENSMUST00000106441 Defa5P28312 93 aa13.89□□□□□ -0.19
Trim47-202ENSMUST00000106441 Spint3Q3UW09 88 aa13.89□□□□□ -0.19
Trim47-202ENSMUST00000106441 Dusp14Q9JLY7 198 aa13.89□□□□□ -0.19
Trim47-202ENSMUST00000106441 Igkv4-71A0A0G2JEH0 117 aa13.88□□□□□ -0.19
Trim47-202ENSMUST00000106441 Gm10036E9PYL9 178 aaKnown RBP13.88□□□□□ -0.19
Trim47-202ENSMUST00000106441 P01643 108 aa13.88□□□□□ -0.19
Trim47-202ENSMUST00000106441 Ang2Q64438 145 aa13.88□□□□□ -0.19
Trim47-202ENSMUST00000106441 Gm12888Q3UW77 119 aa13.88□□□□□ -0.19
Trim47-202ENSMUST00000106441 Wfdc15bQ9JHY4 80 aa13.88□□□□□ -0.19
Trim47-202ENSMUST00000106441 Iglc1A0A0G2JE99 106 aa13.87□□□□□ -0.19
Trim47-202ENSMUST00000106441 P01843 105 aa13.87□□□□□ -0.19
Trim47-202ENSMUST00000106441 Gm29289A0A087WPY7 166 aa13.86□□□□□ -0.19
Trim47-202ENSMUST00000106441 Gm4064A0A087WR82 380 aa13.86□□□□□ -0.19
Trim47-202ENSMUST00000106441 Gm10352B2RWR6 380 aa13.86□□□□□ -0.19
Trim47-202ENSMUST00000106441 Gm21693J3QK27 380 aa13.86□□□□□ -0.19
Trim47-202ENSMUST00000106441 Rbmy1a1O35698 380 aa13.86□□□□□ -0.19
Trim47-202ENSMUST00000106441 Hint1P70349 126 aaKnown RBP13.86□□□□□ -0.19
Trim47-202ENSMUST00000106441 Zfp248Q640N4 576 aa13.86□□□□□ -0.19
Trim47-202ENSMUST00000106441 Gm14137Q8CE97 175 aa13.86□□□□□ -0.19
Trim47-202ENSMUST00000106441 Chd6A3KFM7 2711 aa13.86□□□□□ -0.19
Trim47-202ENSMUST00000106441 BatfO35284 125 aa13.86□□□□□ -0.19
Trim47-202ENSMUST00000106441 AamdcQ8R0P4 122 aa13.86□□□□□ -0.19
Trim47-202ENSMUST00000106441 Crlf1Q9JM58 425 aa13.86□□□□□ -0.19
Trim47-202ENSMUST00000106441 Smim1P0C8K7 78 aa13.85□□□□□ -0.19
Trim47-202ENSMUST00000106441 Tmem14cQ9CQN6 114 aa13.85□□□□□ -0.19
Trim47-202ENSMUST00000106441 Q9DAB9 146 aa13.85□□□□□ -0.19
Trim47-202ENSMUST00000106441 Tcrg-C1A0A075B5Z0 172 aa13.85□□□□□ -0.19
Trim47-202ENSMUST00000106441 Umad1E0CX23 159 aa13.85□□□□□ -0.19
Trim47-202ENSMUST00000106441 Vamp8O70404 101 aa13.85□□□□□ -0.19
Trim47-202ENSMUST00000106441 Ccl25O35903 144 aa13.84□□□□□ -0.19
Trim47-202ENSMUST00000106441 Rbmxl2Q9DAE2 385 aaKnown RBP13.84□□□□□ -0.19
Trim47-202ENSMUST00000106441 Gm15557A6PWY0 234 aa13.83□□□□□ -0.19
Trim47-202ENSMUST00000106441 Trav2Q5R1I9 109 aa13.83□□□□□ -0.19
Trim47-202ENSMUST00000106441 Ndufa4Q62425 82 aaKnown RBP13.83□□□□□ -0.19
Trim47-202ENSMUST00000106441 Dpm3Q9D1Q4 92 aa13.83□□□□□ -0.19
Trim47-202ENSMUST00000106441 P01741 114 aa13.83□□□□□ -0.2
Trim47-202ENSMUST00000106441 Defa24Q5G865 93 aa13.83□□□□□ -0.2
Trim47-202ENSMUST00000106441 Prss29Q99MS4 279 aa13.83□□□□□ -0.2
Trim47-202ENSMUST00000106441 Gm21994F6T2D2 329 aa13.82□□□□□ -0.2
Trim47-202ENSMUST00000106441 Fhl1P97447 280 aaKnown RBP13.82□□□□□ -0.2
Trim47-202ENSMUST00000106441 Odf1Q61999 247 aa13.82□□□□□ -0.2
Trim47-202ENSMUST00000106441 Mob4Q6PEB6 225 aa13.82□□□□□ -0.2
Trim47-202ENSMUST00000106441 Ovol2Q8CIV7 274 aa13.82□□□□□ -0.2
Trim47-202ENSMUST00000106441 Ormdl2Q9CQZ0 153 aa13.82□□□□□ -0.2
Trim47-202ENSMUST00000106441 P01794 123 aa13.82□□□□□ -0.2
Trim47-202ENSMUST00000106441 SNORCQ9CXL7 121 aa13.82□□□□□ -0.2
Trim47-202ENSMUST00000106441 9530053A07RikE9PVG8 2581 aa13.81□□□□□ -0.2
Trim47-202ENSMUST00000106441 Ighv8-12A0A0G2JDE1 119 aa13.81□□□□□ -0.2
Trim47-202ENSMUST00000106441 TcraP01849 138 aa13.81□□□□□ -0.2
Trim47-202ENSMUST00000106441 Khdc1cQ4KL78 166 aa13.81□□□□□ -0.2
Trim47-202ENSMUST00000106441 Igkv4-70A0A0B4J1I5 116 aa13.81□□□□□ -0.2
Trim47-202ENSMUST00000106441 Gm45717A0A1B0GT68 152 aa13.81□□□□□ -0.2
Trim47-202ENSMUST00000106441 4930447F04RikA2AFR2 126 aa13.81□□□□□ -0.2
Trim47-202ENSMUST00000106441 Ighv1-62-3P01754 117 aa13.81□□□□□ -0.2
Trim47-202ENSMUST00000106441 Fam222aQ6PGH4 453 aa13.81□□□□□ -0.2
Trim47-202ENSMUST00000106441 MrapQ9D159 127 aa13.81□□□□□ -0.2
Trim47-202ENSMUST00000106441 Ighv12-3A0A075B5T1 117 aa13.8□□□□□ -0.2
Trim47-202ENSMUST00000106441 Ighv1-9A0A0A6YW37 117 aa13.8□□□□□ -0.2
Trim47-202ENSMUST00000106441 Ighv1-82A0A0G2JEU7 117 aa13.8□□□□□ -0.2
Trim47-202ENSMUST00000106441 Arl3Q9WUL7 182 aa13.8□□□□□ -0.2
Trim47-202ENSMUST00000106441 PlaurP35456 327 aa13.79□□□□□ -0.2
Trim47-202ENSMUST00000106441 Atp6v0e2Q91XE7 81 aa13.79□□□□□ -0.2
Trim47-202ENSMUST00000106441 Tenm3Q9WTS6 2715 aa13.79□□□□□ -0.2
Trim47-202ENSMUST00000106441 Ighv1-22A0A075B5U7 117 aa13.79□□□□□ -0.2
Trim47-202ENSMUST00000106441 Ighv1-80A0A075B5Y3 117 aa13.79□□□□□ -0.2
Trim47-202ENSMUST00000106441 Igkv20-101-2A0A0G2JDU3 113 aa13.79□□□□□ -0.2
Trim47-202ENSMUST00000106441 TshbP12656 138 aa13.79□□□□□ -0.2
Trim47-202ENSMUST00000106441 Sumo2P61957 95 aaKnown RBP13.79□□□□□ -0.2
Trim47-202ENSMUST00000106441 Rasl11bQ922H7 247 aa13.79□□□□□ -0.2
Trim47-202ENSMUST00000106441 Sdhaf1Q3U276 118 aa13.78□□□□□ -0.2
Trim47-202ENSMUST00000106441 Clec5aQ9R007 190 aa13.78□□□□□ -0.2
Trim47-202ENSMUST00000106441 Ighv1-75A0A075B5Y2 117 aa13.78□□□□□ -0.2
Trim47-202ENSMUST00000106441 Lgals6O54891 301 aa13.78□□□□□ -0.2
Trim47-202ENSMUST00000106441 S100a4P07091 101 aa13.78□□□□□ -0.2
Retrieved 100 of 22,080 RNA–protein pairs in 43.5 ms