RNA–Protein interactions for RNA: ENSMUST00000061628.6

Pcdh20-201, Transcript of Protocadherin-20, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh20, Length 5,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20-201ENSMUST00000061628 Vwa8Q8CC88 1905 aa11.5□□□□□ -0.57
Pcdh20-201ENSMUST00000061628 Odf1Q61999 247 aa11.5□□□□□ -0.57
Pcdh20-201ENSMUST00000061628 Trav4-3A0A0B4J1K1 110 aa11.49□□□□□ -0.57
Pcdh20-201ENSMUST00000061628 Ang4Q3TMQ6 144 aa11.49□□□□□ -0.57
Pcdh20-201ENSMUST00000061628 Timm17aQ9Z0V8 171 aa11.49□□□□□ -0.57
Pcdh20-201ENSMUST00000061628 GhrhP16043 103 aa11.49□□□□□ -0.57
Pcdh20-201ENSMUST00000061628 Nop10Q9CQS2 64 aa11.49□□□□□ -0.57
Pcdh20-201ENSMUST00000061628 Clec4b2Q67DU8 208 aa11.49□□□□□ -0.57
Pcdh20-201ENSMUST00000061628 Igkv6-13A0A0G2JGY3 119 aa11.48□□□□□ -0.57
Pcdh20-201ENSMUST00000061628 Wfdc2Q9DAU7 174 aa11.48□□□□□ -0.57
Pcdh20-201ENSMUST00000061628 Bex1Q9R224 128 aa11.48□□□□□ -0.57
Pcdh20-201ENSMUST00000061628 Nlrc5C3VPR6 1915 aa11.48□□□□□ -0.57
Pcdh20-201ENSMUST00000061628 Nsun4C4P6S0 806 aaKnown RBP11.48□□□□□ -0.57
Pcdh20-201ENSMUST00000061628 MplkipQ9D011 178 aa11.48□□□□□ -0.57
Pcdh20-201ENSMUST00000061628 7420426K07RikQ3UX66 186 aa11.48□□□□□ -0.57
Pcdh20-201ENSMUST00000061628 Zc2hc1bQ9D534 172 aa11.48□□□□□ -0.57
Pcdh20-201ENSMUST00000061628 PpbpQ9EQI5 113 aa11.48□□□□□ -0.57
Pcdh20-201ENSMUST00000061628 Trbv16A0A0B4J1H3 115 aa11.48□□□□□ -0.57
Pcdh20-201ENSMUST00000061628 Fam24aQ8CF27 98 aa11.48□□□□□ -0.57
Pcdh20-201ENSMUST00000061628 Obox8V9GWY9 217 aa11.48□□□□□ -0.57
Pcdh20-201ENSMUST00000061628 AtrxQ61687 2476 aaKnown RBP11.47□□□□□ -0.57
Pcdh20-201ENSMUST00000061628 A230072I06RikQ3UUJ8 172 aa11.47□□□□□ -0.57
Pcdh20-201ENSMUST00000061628 Spink12Q9D256 87 aa11.47□□□□□ -0.57
Pcdh20-201ENSMUST00000061628 Igkv4-57A0A0A6YYE7 117 aa11.47□□□□□ -0.57
Pcdh20-201ENSMUST00000061628 Gm6034E9Q101 117 aa11.47□□□□□ -0.57
Pcdh20-201ENSMUST00000061628 Gm19684G3UZ45 117 aa11.47□□□□□ -0.57
Pcdh20-201ENSMUST00000061628 P01753 117 aa11.47□□□□□ -0.57
Pcdh20-201ENSMUST00000061628 SelenowP63300 88 aa11.47□□□□□ -0.57
Pcdh20-201ENSMUST00000061628 Gm17324Q8C6J8 137 aa11.47□□□□□ -0.57
Pcdh20-201ENSMUST00000061628 P01643 108 aa11.47□□□□□ -0.57
Pcdh20-201ENSMUST00000061628 Rmi2Q3UPE3 149 aa11.47□□□□□ -0.57
Pcdh20-201ENSMUST00000061628 Ndufs7Q9DC70 224 aa11.47□□□□□ -0.57
Pcdh20-201ENSMUST00000061628 9230109A22RikQ8BHE6 111 aa11.46□□□□□ -0.57
Pcdh20-201ENSMUST00000061628 Ndufb4Q9CQC7 129 aa11.46□□□□□ -0.57
Pcdh20-201ENSMUST00000061628 Vsig4F6TUL9 280 aa11.46□□□□□ -0.57
Pcdh20-201ENSMUST00000061628 NpbQ8K4P1 119 aa11.46□□□□□ -0.57
Pcdh20-201ENSMUST00000061628 Runx1Q03347 451 aa11.46□□□□□ -0.58
Pcdh20-201ENSMUST00000061628 Nbl1Q61477 178 aa11.46□□□□□ -0.58
Pcdh20-201ENSMUST00000061628 CstadQ9D245 104 aa11.46□□□□□ -0.58
Pcdh20-201ENSMUST00000061628 Pcdh15Q99PJ1 1943 aa11.46□□□□□ -0.58
Pcdh20-201ENSMUST00000061628 Sigmar1O55242 223 aa11.46□□□□□ -0.58
Pcdh20-201ENSMUST00000061628 Klk11Q9QYN3 276 aa11.46□□□□□ -0.58
Pcdh20-201ENSMUST00000061628 Gm15294V9GXA7 121 aa11.46□□□□□ -0.58
Pcdh20-201ENSMUST00000061628 Lst1O08843 95 aa11.45□□□□□ -0.58
Pcdh20-201ENSMUST00000061628 Zmat4Q8BZ94 229 aa11.45□□□□□ -0.58
Pcdh20-201ENSMUST00000061628 Spag11Q8K4N2 71 aa11.45□□□□□ -0.58
Pcdh20-201ENSMUST00000061628 AvpP35455 168 aa11.45□□□□□ -0.58
Pcdh20-201ENSMUST00000061628 Trav9-2A0A075B647 113 aa11.44□□□□□ -0.58
Pcdh20-201ENSMUST00000061628 Trav9-4A0A0B4J1K2 113 aa11.44□□□□□ -0.58
Pcdh20-201ENSMUST00000061628 Defb18Q30KP5 85 aa11.44□□□□□ -0.58
Pcdh20-201ENSMUST00000061628 Hoxb4P10284 250 aa11.44□□□□□ -0.58
Pcdh20-201ENSMUST00000061628 Spata25Q9DA57 226 aa11.44□□□□□ -0.58
Pcdh20-201ENSMUST00000061628 Gm7257D3YX25 99 aa11.44□□□□□ -0.58
Pcdh20-201ENSMUST00000061628 Ncor1Q60974 2453 aa11.44□□□□□ -0.58
Pcdh20-201ENSMUST00000061628 Zfp951A0A087WRH0 451 aa11.43□□□□□ -0.58
Pcdh20-201ENSMUST00000061628 Gm15128A2ADW8 449 aa11.43□□□□□ -0.58
Pcdh20-201ENSMUST00000061628 Gm15093A2BI72 449 aa11.43□□□□□ -0.58
Pcdh20-201ENSMUST00000061628 Luzp4B1AV09 449 aa11.43□□□□□ -0.58
Pcdh20-201ENSMUST00000061628 Gm15107B1B0X0 449 aa11.43□□□□□ -0.58
Pcdh20-201ENSMUST00000061628 Gm15097E9QA14 449 aa11.43□□□□□ -0.58
Pcdh20-201ENSMUST00000061628 Gm15085Q62012 449 aa11.43□□□□□ -0.58
Pcdh20-201ENSMUST00000061628 Defb29Q8BGW9 78 aa11.43□□□□□ -0.58
Pcdh20-201ENSMUST00000061628 Ramp1Q9WTJ5 148 aa11.43□□□□□ -0.58
Pcdh20-201ENSMUST00000061628 Cox11Q6P8I6 275 aa11.43□□□□□ -0.58
Pcdh20-201ENSMUST00000061628 Jmjd1cQ69ZK6 2350 aa11.43□□□□□ -0.58
Pcdh20-201ENSMUST00000061628 Glrp1E9Q9S8 174 aa11.43□□□□□ -0.58
Pcdh20-201ENSMUST00000061628 Gm10553J3QPF1 123 aa11.43□□□□□ -0.58
Pcdh20-201ENSMUST00000061628 IgipA0A1B0GR74 53 aa11.42□□□□□ -0.58
Pcdh20-201ENSMUST00000061628 Atp5g3P56384 141 aa11.42□□□□□ -0.58
Pcdh20-201ENSMUST00000061628 Atp5g1Q9CR84 136 aa11.42□□□□□ -0.58
Pcdh20-201ENSMUST00000061628 Gm15127B1AVZ5 449 aa11.42□□□□□ -0.58
Pcdh20-201ENSMUST00000061628 9130230L23RikQ8CC80 163 aa11.42□□□□□ -0.58
Pcdh20-201ENSMUST00000061628 Atp6v0e2Q91XE7 81 aa11.42□□□□□ -0.58
Pcdh20-201ENSMUST00000061628 Mlst8Q9DCJ1 326 aa11.42□□□□□ -0.58
Pcdh20-201ENSMUST00000061628 Nckap5E9QAE1 1909 aa11.42□□□□□ -0.58
Pcdh20-201ENSMUST00000061628 Fhl1P97447 280 aaKnown RBP11.42□□□□□ -0.58
Pcdh20-201ENSMUST00000061628 Defa21Q8C1P2 93 aa11.42□□□□□ -0.58
Pcdh20-201ENSMUST00000061628 Prpf8Q99PV0 2335 aaKnown RBP11.41□□□□□ -0.58
Pcdh20-201ENSMUST00000061628 Trav9n-2A0A0G2JDP3 113 aa11.41□□□□□ -0.58
Pcdh20-201ENSMUST00000061628 Foxi2Q3I5G5 311 aa11.41□□□□□ -0.58
Pcdh20-201ENSMUST00000061628 Trav9d-3A0A075B695 113 aa11.41□□□□□ -0.58
Pcdh20-201ENSMUST00000061628 Tmem258P61166 79 aa11.41□□□□□ -0.58
Pcdh20-201ENSMUST00000061628 MyofQ69ZN7 2048 aaKnown RBP11.4□□□□□ -0.58
Pcdh20-201ENSMUST00000061628 MsmpB1AWI6 139 aa11.4□□□□□ -0.58
Pcdh20-201ENSMUST00000061628 P01748 117 aa11.4□□□□□ -0.58
Pcdh20-201ENSMUST00000061628 Gm10295Q8CCF3 114 aa11.4□□□□□ -0.58
Pcdh20-201ENSMUST00000061628 CenpeQ6RT24 2474 aaKnown RBP11.4□□□□□ -0.58
Pcdh20-201ENSMUST00000061628 Ighv1-53A0A075B5W3 117 aa11.4□□□□□ -0.58
Pcdh20-201ENSMUST00000061628 Ighv13-2A0A0A6YWN3 119 aa11.4□□□□□ -0.58
Pcdh20-201ENSMUST00000061628 Gm20708H3BKF4 155 aa11.4□□□□□ -0.58
Pcdh20-201ENSMUST00000061628 Arfgef3Q3UGY8 2170 aa11.4□□□□□ -0.58
Pcdh20-201ENSMUST00000061628 Gm15557A6PWY0 234 aa11.4□□□□□ -0.59
Pcdh20-201ENSMUST00000061628 Hrct1Q9D6B9 109 aa11.4□□□□□ -0.59
Pcdh20-201ENSMUST00000061628 Plxnb1Q8CJH3 2119 aa11.4□□□□□ -0.59
Pcdh20-201ENSMUST00000061628 Gm17455G3UW87 128 aa11.39□□□□□ -0.59
Pcdh20-201ENSMUST00000061628 Acyp1P56376 99 aa11.39□□□□□ -0.59
Pcdh20-201ENSMUST00000061628 Tmem223Q9CQE2 199 aaKnown RBP11.39□□□□□ -0.59
Pcdh20-201ENSMUST00000061628 9430069I07RikQ9CX21 111 aa11.39□□□□□ -0.59
Pcdh20-201ENSMUST00000061628 Gm20730A0A075B5J6 119 aa11.39□□□□□ -0.59
Pcdh20-201ENSMUST00000061628 Col4a6B1AVK5 1691 aa11.39□□□□□ -0.59
Retrieved 100 of 22,080 RNA–protein pairs in 157.6 ms