RNA–Protein interactions for RNA: ENSMUST00000058579.6

Ddx28-201, Transcript of Probable ATP-dependent RNA helicase DDX28, mousemouse

APPRIS P1 BASIC

Gene Ddx28, Length 2,262 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx28-201ENSMUST00000058579 Mrps12O35680 139 aa13.01□□□□□ -0.33
Ddx28-201ENSMUST00000058579 Cks1brtQ3UNC9 96 aa13.01□□□□□ -0.33
Ddx28-201ENSMUST00000058579 Samd10Q7TST3 202 aa13.01□□□□□ -0.33
Ddx28-201ENSMUST00000058579 Taf15Q8BQ46 557 aaKnown RBP13.01□□□□□ -0.33
Ddx28-201ENSMUST00000058579 Mustn1Q99JI1 82 aa13.01□□□□□ -0.33
Ddx28-201ENSMUST00000058579 Brd3osA0A1B0GRB6 84 aa13.01□□□□□ -0.33
Ddx28-201ENSMUST00000058579 Rpl24Q8BP67 157 aaKnown RBP13□□□□□ -0.33
Ddx28-201ENSMUST00000058579 Gm14137Q8CE97 175 aa13□□□□□ -0.33
Ddx28-201ENSMUST00000058579 Q9CX63 252 aa13□□□□□ -0.33
Ddx28-201ENSMUST00000058579 Usp24B1AY13 2617 aaKnown RBP13□□□□□ -0.33
Ddx28-201ENSMUST00000058579 Iglc1A0A0G2JE99 106 aa13□□□□□ -0.33
Ddx28-201ENSMUST00000058579 P01747 120 aa13□□□□□ -0.33
Ddx28-201ENSMUST00000058579 P01750 117 aa13□□□□□ -0.33
Ddx28-201ENSMUST00000058579 P01843 105 aa13□□□□□ -0.33
Ddx28-201ENSMUST00000058579 Gm5629P06327 117 aa13□□□□□ -0.33
Ddx28-201ENSMUST00000058579 Ovol2Q8CIV7 274 aa13□□□□□ -0.33
Ddx28-201ENSMUST00000058579 OtoglF7A4A7 2325 aa12.99□□□□□ -0.33
Ddx28-201ENSMUST00000058579 Ighv3-8A0A075B5T0 131 aa12.99□□□□□ -0.33
Ddx28-201ENSMUST00000058579 Gm10521E9PZK0 135 aa12.99□□□□□ -0.33
Ddx28-201ENSMUST00000058579 Gm10271F6WY25 52 aa12.99□□□□□ -0.33
Ddx28-201ENSMUST00000058579 Lgals6O54891 301 aa12.99□□□□□ -0.33
Ddx28-201ENSMUST00000058579 Vamp8O70404 101 aa12.99□□□□□ -0.33
Ddx28-201ENSMUST00000058579 P01837 106 aa12.99□□□□□ -0.33
Ddx28-201ENSMUST00000058579 Csn3P06796 181 aa12.99□□□□□ -0.33
Ddx28-201ENSMUST00000058579 Prss29Q99MS4 279 aa12.99□□□□□ -0.33
Ddx28-201ENSMUST00000058579 Q9D727 114 aa12.99□□□□□ -0.33
Ddx28-201ENSMUST00000058579 Trav8-1A0A075B641 109 aa12.98□□□□□ -0.33
Ddx28-201ENSMUST00000058579 Trav6-4A0A075B6B4 115 aa12.98□□□□□ -0.33
Ddx28-201ENSMUST00000058579 A730046J19RikA0A1B0GSN8 89 aa12.98□□□□□ -0.33
Ddx28-201ENSMUST00000058579 Esp4A8R0T8 117 aa12.98□□□□□ -0.33
Ddx28-201ENSMUST00000058579 BlcapP62951 87 aa12.98□□□□□ -0.33
Ddx28-201ENSMUST00000058579 Igkv4-74A0A0B4J1I3 119 aa12.97□□□□□ -0.33
Ddx28-201ENSMUST00000058579 MdfiP70331 251 aa12.97□□□□□ -0.33
Ddx28-201ENSMUST00000058579 Tmem170bP86050 132 aa12.97□□□□□ -0.33
Ddx28-201ENSMUST00000058579 Olfr313Q5NC55 308 aa12.97□□□□□ -0.33
Ddx28-201ENSMUST00000058579 LbhQ9CX60 105 aa12.97□□□□□ -0.33
Ddx28-201ENSMUST00000058579 Fam240aJ3QNP9 97 aa12.96□□□□□ -0.33
Ddx28-201ENSMUST00000058579 AamdcQ8R0P4 122 aa12.96□□□□□ -0.33
Ddx28-201ENSMUST00000058579 Rbmxl2Q9DAE2 385 aaKnown RBP12.96□□□□□ -0.33
Ddx28-201ENSMUST00000058579 Slamf6Q9ET39 351 aa12.96□□□□□ -0.33
Ddx28-201ENSMUST00000058579 Pradc1Q9D9N8 188 aa12.96□□□□□ -0.34
Ddx28-201ENSMUST00000058579 Ighv1-64A0A075B5X3 117 aa12.95□□□□□ -0.34
Ddx28-201ENSMUST00000058579 Igkv4-69A0A0B4J1I6 116 aa12.95□□□□□ -0.34
Ddx28-201ENSMUST00000058579 Gm44965A0A0N4SVR3 59 aa12.95□□□□□ -0.34
Ddx28-201ENSMUST00000058579 Rpl36-ps4A0A140T8U4 117 aa12.95□□□□□ -0.34
Ddx28-201ENSMUST00000058579 Gm9925F6T2U3 160 aa12.95□□□□□ -0.34
Ddx28-201ENSMUST00000058579 Sprr3O09116 238 aa12.95□□□□□ -0.34
Ddx28-201ENSMUST00000058579 P01741 114 aa12.95□□□□□ -0.34
Ddx28-201ENSMUST00000058579 P01812 117 aa12.95□□□□□ -0.34
Ddx28-201ENSMUST00000058579 P06328 117 aa12.95□□□□□ -0.34
Ddx28-201ENSMUST00000058579 Usmg5Q78IK2 58 aa12.95□□□□□ -0.34
Ddx28-201ENSMUST00000058579 Znf580Q9DB38 172 aa12.95□□□□□ -0.34
Ddx28-201ENSMUST00000058579 Tcrg-C3L7N479 172 aa12.95□□□□□ -0.34
Ddx28-201ENSMUST00000058579 LhbO09108 141 aa12.95□□□□□ -0.34
Ddx28-201ENSMUST00000058579 P03985 172 aa12.95□□□□□ -0.34
Ddx28-201ENSMUST00000058579 Ighv1-50A0A075B5W1 117 aa12.94□□□□□ -0.34
Ddx28-201ENSMUST00000058579 Tmem262D3Z338 116 aa12.94□□□□□ -0.34
Ddx28-201ENSMUST00000058579 Defa37K9J724 93 aa12.94□□□□□ -0.34
Ddx28-201ENSMUST00000058579 Defa5P28312 93 aa12.94□□□□□ -0.34
Ddx28-201ENSMUST00000058579 Trav7-2Q5R1I3 112 aa12.94□□□□□ -0.34
Ddx28-201ENSMUST00000058579 Ss18Q62280 418 aa12.94□□□□□ -0.34
Ddx28-201ENSMUST00000058579 Plac1Q9JI83 173 aa12.94□□□□□ -0.34
Ddx28-201ENSMUST00000058579 Ptpn13Q64512 2453 aa12.94□□□□□ -0.34
Ddx28-201ENSMUST00000058579 Trbv13-1A0A0B4J1P8 112 aa12.93□□□□□ -0.34
Ddx28-201ENSMUST00000058579 Smr3aQ61900 147 aa12.93□□□□□ -0.34
Ddx28-201ENSMUST00000058579 Klk7Q91VE3 249 aa12.93□□□□□ -0.34
Ddx28-201ENSMUST00000058579 Iah1Q9DB29 249 aa12.93□□□□□ -0.34
Ddx28-201ENSMUST00000058579 Egr2P08152 470 aa12.93□□□□□ -0.34
Ddx28-201ENSMUST00000058579 Defb45Q3V490 66 aa12.93□□□□□ -0.34
Ddx28-201ENSMUST00000058579 Hrct1Q9D6B9 109 aa12.93□□□□□ -0.34
Ddx28-201ENSMUST00000058579 Hint1P70349 126 aaKnown RBP12.92□□□□□ -0.34
Ddx28-201ENSMUST00000058579 Gm10295Q8CCF3 114 aa12.92□□□□□ -0.34
Ddx28-201ENSMUST00000058579 Hectd1Q69ZR2 2618 aaKnown RBP12.92□□□□□ -0.34
Ddx28-201ENSMUST00000058579 LystP97412 3788 aa12.92□□□□□ -0.34
Ddx28-201ENSMUST00000058579 Ighv1-66A0A075B5X5 117 aa12.92□□□□□ -0.34
Ddx28-201ENSMUST00000058579 Gm12057A0A087WR21 115 aa12.92□□□□□ -0.34
Ddx28-201ENSMUST00000058579 Sap30O88574 220 aa12.92□□□□□ -0.34
Ddx28-201ENSMUST00000058579 P01643 108 aa12.92□□□□□ -0.34
Ddx28-201ENSMUST00000058579 Prpf8Q99PV0 2335 aaKnown RBP12.92□□□□□ -0.34
Ddx28-201ENSMUST00000058579 Spink13Q3UTS8 97 aa12.91□□□□□ -0.34
Ddx28-201ENSMUST00000058579 Ndufb4Q9CQC7 129 aa12.91□□□□□ -0.34
Ddx28-201ENSMUST00000058579 3110018I06RikQ9CXS0 120 aa12.91□□□□□ -0.34
Ddx28-201ENSMUST00000058579 Gm45753A0A1C7CYU8 86 aa12.91□□□□□ -0.34
Ddx28-201ENSMUST00000058579 Prr3Q811B5 190 aaKnown RBP12.91□□□□□ -0.34
Ddx28-201ENSMUST00000058579 PmvkQ9D1G2 192 aa12.91□□□□□ -0.34
Ddx28-201ENSMUST00000058579 Ccl25O35903 144 aa12.9□□□□□ -0.34
Ddx28-201ENSMUST00000058579 Polr2kQ63871 58 aa12.9□□□□□ -0.34
Ddx28-201ENSMUST00000058579 Tcf24V9GWT9 166 aa12.9□□□□□ -0.34
Ddx28-201ENSMUST00000058579 Chd8Q09XV5 2582 aaKnown RBP12.9□□□□□ -0.34
Ddx28-201ENSMUST00000058579 Krtap26-1Q9D7N2 215 aa12.9□□□□□ -0.35
Ddx28-201ENSMUST00000058579 Rs1Q9Z1L4 224 aa12.9□□□□□ -0.35
Ddx28-201ENSMUST00000058579 Ankrd11E9Q4F7 2643 aa12.89□□□□□ -0.35
Ddx28-201ENSMUST00000058579 Gm10226O88253 85 aa12.89□□□□□ -0.35
Ddx28-201ENSMUST00000058579 PlaurP35456 327 aa12.89□□□□□ -0.35
Ddx28-201ENSMUST00000058579 Rpl39P62892 51 aa12.89□□□□□ -0.35
Ddx28-201ENSMUST00000058579 Rpl32P62911 135 aaKnown RBP12.89□□□□□ -0.35
Ddx28-201ENSMUST00000058579 1500011B03RikQ3TTH7 73 aa12.89□□□□□ -0.35
Ddx28-201ENSMUST00000058579 Defa24Q5G865 93 aa12.89□□□□□ -0.35
Ddx28-201ENSMUST00000058579 Igkv2-137A0A0B4J1H6 120 aa12.88□□□□□ -0.35
Ddx28-201ENSMUST00000058579 P01726 129 aa12.88□□□□□ -0.35
Retrieved 100 of 22,080 RNA–protein pairs in 33.5 ms