RNA–Protein interactions for RNA: ENSMUST00000057185.12

Pcdh1-201, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh1, Length 3,902 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-201ENSMUST00000057185 Tdgf1P51865 171 aa7.47□□□□□ -1.21
Pcdh1-201ENSMUST00000057185 BlcapP62951 87 aa7.47□□□□□ -1.21
Pcdh1-201ENSMUST00000057185 Pradc1Q9D9N8 188 aa7.47□□□□□ -1.21
Pcdh1-201ENSMUST00000057185 Tnfrsf23Q9ER63 176 aa7.47□□□□□ -1.21
Pcdh1-201ENSMUST00000057185 Hbb-bsA8DUK4 147 aa7.47□□□□□ -1.21
Pcdh1-201ENSMUST00000057185 Esp24A8R0V6 68 aa7.47□□□□□ -1.21
Pcdh1-201ENSMUST00000057185 Hbb-b1P02088 147 aa7.47□□□□□ -1.21
Pcdh1-201ENSMUST00000057185 Gpr82Q8BZR0 328 aa7.47□□□□□ -1.21
Pcdh1-201ENSMUST00000057185 Prss29Q99MS4 279 aa7.47□□□□□ -1.21
Pcdh1-201ENSMUST00000057185 RhohQ9D3G9 191 aa7.47□□□□□ -1.21
Pcdh1-201ENSMUST00000057185 Nit2Q9JHW2 276 aa7.47□□□□□ -1.21
Pcdh1-201ENSMUST00000057185 Ighv1-4A0A075B5T4 117 aa7.46□□□□□ -1.21
Pcdh1-201ENSMUST00000057185 Tcrg-C3L7N479 172 aa7.46□□□□□ -1.21
Pcdh1-201ENSMUST00000057185 Vamp8O70404 101 aa7.46□□□□□ -1.21
Pcdh1-201ENSMUST00000057185 P03985 172 aa7.46□□□□□ -1.21
Pcdh1-201ENSMUST00000057185 Mettl26Q9DCS2 204 aa7.46□□□□□ -1.21
Pcdh1-201ENSMUST00000057185 Igkv4-57A0A0A6YYE7 117 aa7.46□□□□□ -1.21
Pcdh1-201ENSMUST00000057185 Itgb1bp1O35671 200 aa7.46□□□□□ -1.21
Pcdh1-201ENSMUST00000057185 Ndufa4Q62425 82 aaKnown RBP7.46□□□□□ -1.21
Pcdh1-201ENSMUST00000057185 Taf15Q8BQ46 557 aaKnown RBP7.46□□□□□ -1.21
Pcdh1-201ENSMUST00000057185 Mustn1Q99JI1 82 aa7.46□□□□□ -1.21
Pcdh1-201ENSMUST00000057185 Rnf185Q91YT2 192 aa7.46□□□□□ -1.22
Pcdh1-201ENSMUST00000057185 Hrct1Q9D6B9 109 aa7.46□□□□□ -1.22
Pcdh1-201ENSMUST00000057185 Igkv4-91A0A075B5L2 119 aa7.46□□□□□ -1.22
Pcdh1-201ENSMUST00000057185 Igkv4-57-1A0A075B5M4 119 aa7.46□□□□□ -1.22
Pcdh1-201ENSMUST00000057185 Rpl36-ps4A0A140T8U4 117 aa7.46□□□□□ -1.22
Pcdh1-201ENSMUST00000057185 Gm17732E9Q5I2 61 aa7.46□□□□□ -1.22
Pcdh1-201ENSMUST00000057185 P01812 117 aa7.46□□□□□ -1.22
Pcdh1-201ENSMUST00000057185 Edn3P48299 214 aa7.46□□□□□ -1.22
Pcdh1-201ENSMUST00000057185 Zfand3Q497H0 227 aa7.46□□□□□ -1.22
Pcdh1-201ENSMUST00000057185 HampQ9EQ21 83 aa7.46□□□□□ -1.22
Pcdh1-201ENSMUST00000057185 Bex1Q9R224 128 aa7.46□□□□□ -1.22
Pcdh1-201ENSMUST00000057185 Smg1Q8BKX6 3658 aaKnown RBP7.45□□□□□ -1.22
Pcdh1-201ENSMUST00000057185 Snrpd3P62320 126 aaKnown RBP7.45□□□□□ -1.22
Pcdh1-201ENSMUST00000057185 Nbeal1E9PYP2 2688 aa7.45□□□□□ -1.22
Pcdh1-201ENSMUST00000057185 CrygbP04344 175 aa7.45□□□□□ -1.22
Pcdh1-201ENSMUST00000057185 7420426K07RikQ3UX66 186 aa7.45□□□□□ -1.22
Pcdh1-201ENSMUST00000057185 Ndufa4l2Q4FZG9 87 aa7.45□□□□□ -1.22
Pcdh1-201ENSMUST00000057185 Foxc2Q61850 494 aa7.45□□□□□ -1.22
Pcdh1-201ENSMUST00000057185 Ighv2-6A0A075B6A7 116 aa7.45□□□□□ -1.22
Pcdh1-201ENSMUST00000057185 Gm10553J3QPF1 123 aa7.45□□□□□ -1.22
Pcdh1-201ENSMUST00000057185 Fgf6P21658 208 aa7.45□□□□□ -1.22
Pcdh1-201ENSMUST00000057185 Fam240bJ3QMB3 78 aa7.44□□□□□ -1.22
Pcdh1-201ENSMUST00000057185 P01741 114 aa7.44□□□□□ -1.22
Pcdh1-201ENSMUST00000057185 Odf3l1Q810P2 275 aa7.44□□□□□ -1.22
Pcdh1-201ENSMUST00000057185 Ovol2Q8CIV7 274 aa7.44□□□□□ -1.22
Pcdh1-201ENSMUST00000057185 Gm16223Q8CBM3 117 aa7.44□□□□□ -1.22
Pcdh1-201ENSMUST00000057185 Znhit3Q9CQK1 151 aa7.44□□□□□ -1.22
Pcdh1-201ENSMUST00000057185 Gm12057A0A087WR21 115 aa7.44□□□□□ -1.22
Pcdh1-201ENSMUST00000057185 Nat8b-psE0CYC6 232 aa7.44□□□□□ -1.22
Pcdh1-201ENSMUST00000057185 Gm26602M0QWA4 95 aa7.44□□□□□ -1.22
Pcdh1-201ENSMUST00000057185 Ccl19O70460 108 aa7.44□□□□□ -1.22
Pcdh1-201ENSMUST00000057185 P01739 132 aa7.44□□□□□ -1.22
Pcdh1-201ENSMUST00000057185 Rpl39P62892 51 aa7.44□□□□□ -1.22
Pcdh1-201ENSMUST00000057185 Cyyr1Q8VIH7 165 aa7.44□□□□□ -1.22
Pcdh1-201ENSMUST00000057185 Iah1Q9DB29 249 aa7.44□□□□□ -1.22
Pcdh1-201ENSMUST00000057185 Tcf24V9GWT9 166 aa7.44□□□□□ -1.22
Pcdh1-201ENSMUST00000057185 Pla2g2aP31482 146 aa7.43□□□□□ -1.22
Pcdh1-201ENSMUST00000057185 Fhl1P97447 280 aaKnown RBP7.43□□□□□ -1.22
Pcdh1-201ENSMUST00000057185 Gm42674D3YUT9 64 aa7.43□□□□□ -1.22
Pcdh1-201ENSMUST00000057185 Runx1Q03347 451 aa7.43□□□□□ -1.22
Pcdh1-201ENSMUST00000057185 Atp5lQ9CPQ8 103 aa7.43□□□□□ -1.22
Pcdh1-201ENSMUST00000057185 Higd1aQ9JLR9 95 aa7.43□□□□□ -1.22
Pcdh1-201ENSMUST00000057185 Gm11020F6ZGD5 61 aa7.43□□□□□ -1.22
Pcdh1-201ENSMUST00000057185 P18527 97 aa7.43□□□□□ -1.22
Pcdh1-201ENSMUST00000057185 Pcp4P63054 62 aa7.43□□□□□ -1.22
Pcdh1-201ENSMUST00000057185 Olfr313Q5NC55 308 aa7.43□□□□□ -1.22
Pcdh1-201ENSMUST00000057185 Klhdc1Q80YG3 406 aa7.43□□□□□ -1.22
Pcdh1-201ENSMUST00000057185 MtorQ9JLN9 2549 aa7.43□□□□□ -1.22
Pcdh1-201ENSMUST00000057185 Ighv3-4A0A0A6YXF1 117 aa7.42□□□□□ -1.22
Pcdh1-201ENSMUST00000057185 Gm44965A0A0N4SVR3 59 aa7.42□□□□□ -1.22
Pcdh1-201ENSMUST00000057185 Gm15557A6PWY0 234 aa7.42□□□□□ -1.22
Pcdh1-201ENSMUST00000057185 Q9CX25 107 aa7.42□□□□□ -1.22
Pcdh1-201ENSMUST00000057185 Cxcl14Q9WUQ5 99 aa7.42□□□□□ -1.22
Pcdh1-201ENSMUST00000057185 Lgals6O54891 301 aa7.42□□□□□ -1.22
Pcdh1-201ENSMUST00000057185 Srp14P16254 110 aaKnown RBP7.42□□□□□ -1.22
Pcdh1-201ENSMUST00000057185 Edn2P22389 175 aa7.42□□□□□ -1.22
Pcdh1-201ENSMUST00000057185 Tal2Q62282 108 aa7.42□□□□□ -1.22
Pcdh1-201ENSMUST00000057185 Iglc1A0A0G2JE99 106 aa7.42□□□□□ -1.22
Pcdh1-201ENSMUST00000057185 P01843 105 aa7.42□□□□□ -1.22
Pcdh1-201ENSMUST00000057185 Gm9961Q8BNV2 113 aa7.42□□□□□ -1.22
Pcdh1-201ENSMUST00000057185 P01747 120 aa7.41□□□□□ -1.22
Pcdh1-201ENSMUST00000057185 CckP09240 115 aa7.41□□□□□ -1.22
Pcdh1-201ENSMUST00000057185 Usmg5Q78IK2 58 aa7.41□□□□□ -1.22
Pcdh1-201ENSMUST00000057185 Tmem14cQ9CQN6 114 aa7.41□□□□□ -1.22
Pcdh1-201ENSMUST00000057185 Obox8V9GWY9 217 aa7.41□□□□□ -1.22
Pcdh1-201ENSMUST00000057185 Gm933J3QPC1 141 aa7.41□□□□□ -1.22
Pcdh1-201ENSMUST00000057185 Kmt2bO08550 2713 aa7.41□□□□□ -1.22
Pcdh1-201ENSMUST00000057185 P01750 117 aa7.41□□□□□ -1.22
Pcdh1-201ENSMUST00000057185 Atp6v0bQ91V37 205 aa7.41□□□□□ -1.22
Pcdh1-201ENSMUST00000057185 Ociad2Q9D8W7 154 aa7.41□□□□□ -1.22
Pcdh1-201ENSMUST00000057185 Ndufa1O35683 70 aa7.4□□□□□ -1.22
Pcdh1-201ENSMUST00000057185 Lmo4P61969 165 aa7.4□□□□□ -1.22
Pcdh1-201ENSMUST00000057185 Snai3Q9QY31 287 aa7.4□□□□□ -1.22
Pcdh1-201ENSMUST00000057185 Ebi3O35228 228 aa7.4□□□□□ -1.22
Pcdh1-201ENSMUST00000057185 CtrlQ9ER05 264 aa7.4□□□□□ -1.22
Pcdh1-201ENSMUST00000057185 Ighv14-1A0A075B5R4 117 aa7.4□□□□□ -1.23
Pcdh1-201ENSMUST00000057185 Ighv3-1A0A075B5S6 116 aa7.4□□□□□ -1.23
Pcdh1-201ENSMUST00000057185 Gm45717A0A1B0GT68 152 aa7.4□□□□□ -1.23
Pcdh1-201ENSMUST00000057185 Tmem238A9JSM3 176 aa7.4□□□□□ -1.23
Retrieved 100 of 22,080 RNA–protein pairs in 48.6 ms