RNA–Protein interactions for RNA: ENSMUST00000041643.3

Pcif1-201, Transcript of Phosphorylated CTD-interacting factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcif1, Length 5,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcif1-201ENSMUST00000041643 Dopey1Q8BL99 2399 aa9.06□□□□□ -0.96
Pcif1-201ENSMUST00000041643 Olfr312Q7TRZ9 308 aa9.06□□□□□ -0.96
Pcif1-201ENSMUST00000041643 Q99M08 65 aa9.06□□□□□ -0.96
Pcif1-201ENSMUST00000041643 Dpm2Q9Z324 84 aa9.06□□□□□ -0.96
Pcif1-201ENSMUST00000041643 DscamQ9ERC8 2013 aa9.06□□□□□ -0.96
Pcif1-201ENSMUST00000041643 Olfr1367Q8VFG2 316 aa9.06□□□□□ -0.96
Pcif1-201ENSMUST00000041643 Usf3B2RUQ2 2221 aa9.05□□□□□ -0.96
Pcif1-201ENSMUST00000041643 Obox8V9GWY9 217 aa9.05□□□□□ -0.96
Pcif1-201ENSMUST00000041643 Znf740Q6NZQ6 180 aa9.05□□□□□ -0.96
Pcif1-201ENSMUST00000041643 MsmbO08540 113 aa9.05□□□□□ -0.96
Pcif1-201ENSMUST00000041643 Chchd5Q9CQP3 110 aa9.05□□□□□ -0.96
Pcif1-201ENSMUST00000041643 Spink10Q8CAC8 162 aa9.05□□□□□ -0.96
Pcif1-201ENSMUST00000041643 Rasl10aQ8K5A4 203 aa9.05□□□□□ -0.96
Pcif1-201ENSMUST00000041643 Trav9d-3A0A075B695 113 aa9.04□□□□□ -0.96
Pcif1-201ENSMUST00000041643 1500011B03RikQ3TTH7 73 aa9.04□□□□□ -0.96
Pcif1-201ENSMUST00000041643 UtrnE9Q6R7 3430 aa9.04□□□□□ -0.96
Pcif1-201ENSMUST00000041643 Trav12d-3A0A075B6A4 115 aa9.04□□□□□ -0.96
Pcif1-201ENSMUST00000041643 Gm26727M0QWT1 121 aa9.04□□□□□ -0.96
Pcif1-201ENSMUST00000041643 Olfr313Q5NC55 308 aa9.04□□□□□ -0.96
Pcif1-201ENSMUST00000041643 Tspan13Q9D8C2 204 aa9.04□□□□□ -0.96
Pcif1-201ENSMUST00000041643 Ifitm1Q9D103 106 aa9.04□□□□□ -0.96
Pcif1-201ENSMUST00000041643 Zc2hc1bQ9D534 172 aa9.04□□□□□ -0.96
Pcif1-201ENSMUST00000041643 Prp2P05143 317 aa9.04□□□□□ -0.96
Pcif1-201ENSMUST00000041643 Trav7-2Q5R1I3 112 aa9.04□□□□□ -0.96
Pcif1-201ENSMUST00000041643 4930470P17RikQ9D542 155 aa9.04□□□□□ -0.96
Pcif1-201ENSMUST00000041643 Ovol3D3YYM0 189 aa9.03□□□□□ -0.96
Pcif1-201ENSMUST00000041643 PlaurP35456 327 aa9.03□□□□□ -0.96
Pcif1-201ENSMUST00000041643 Gata3P23772 443 aa9.03□□□□□ -0.96
Pcif1-201ENSMUST00000041643 Tomm6Q9CQN3 74 aa9.03□□□□□ -0.96
Pcif1-201ENSMUST00000041643 Shisa9Q9CZN4 424 aa9.03□□□□□ -0.96
Pcif1-201ENSMUST00000041643 PolP10400 120 aa9.03□□□□□ -0.96
Pcif1-201ENSMUST00000041643 MdfiP70331 251 aa9.03□□□□□ -0.96
Pcif1-201ENSMUST00000041643 Tm4sf20Q9CQY8 226 aa9.03□□□□□ -0.96
Pcif1-201ENSMUST00000041643 SonQ9QX47 2444 aaKnown RBP9.03□□□□□ -0.96
Pcif1-201ENSMUST00000041643 Kiaa1549Q68FD9 1940 aa9.03□□□□□ -0.96
Pcif1-201ENSMUST00000041643 F11rO88792 300 aa9.03□□□□□ -0.96
Pcif1-201ENSMUST00000041643 P01659 112 aa9.03□□□□□ -0.96
Pcif1-201ENSMUST00000041643 Odf1Q61999 247 aa9.03□□□□□ -0.96
Pcif1-201ENSMUST00000041643 Gphb5Q812B2 130 aa9.03□□□□□ -0.96
Pcif1-201ENSMUST00000041643 Trbv13-1A0A0B4J1P8 112 aa9.03□□□□□ -0.96
Pcif1-201ENSMUST00000041643 F5O88783 2183 aa9.02□□□□□ -0.96
Pcif1-201ENSMUST00000041643 Igkv2-137A0A0B4J1H6 120 aa9.02□□□□□ -0.96
Pcif1-201ENSMUST00000041643 P01756 117 aa9.02□□□□□ -0.96
Pcif1-201ENSMUST00000041643 P01757 117 aa9.02□□□□□ -0.96
Pcif1-201ENSMUST00000041643 Ighv8-8A0A0A6YXQ0 119 aa9.02□□□□□ -0.97
Pcif1-201ENSMUST00000041643 Pglyrp1O88593 182 aa9.02□□□□□ -0.97
Pcif1-201ENSMUST00000041643 Hint1P70349 126 aaKnown RBP9.02□□□□□ -0.97
Pcif1-201ENSMUST00000041643 P01745 121 aa9.02□□□□□ -0.97
Pcif1-201ENSMUST00000041643 P01794 123 aa9.02□□□□□ -0.97
Pcif1-201ENSMUST00000041643 Zcwpw2Q08EN7 125 aa9.01□□□□□ -0.97
Pcif1-201ENSMUST00000041643 Prpf8Q99PV0 2335 aaKnown RBP9.01□□□□□ -0.97
Pcif1-201ENSMUST00000041643 P01674 108 aa9.01□□□□□ -0.97
Pcif1-201ENSMUST00000041643 Ndufc2Q9CQ54 120 aa9.01□□□□□ -0.97
Pcif1-201ENSMUST00000041643 Sdk1Q3UH53 2193 aa9.01□□□□□ -0.97
Pcif1-201ENSMUST00000041643 CrygbP04344 175 aa9.01□□□□□ -0.97
Pcif1-201ENSMUST00000041643 Samd5Q3V1H9 173 aa9.01□□□□□ -0.97
Pcif1-201ENSMUST00000041643 Arhgef17Q80U35 2057 aa9.01□□□□□ -0.97
Pcif1-201ENSMUST00000041643 CckP09240 115 aa9□□□□□ -0.97
Pcif1-201ENSMUST00000041643 AtrxQ61687 2476 aaKnown RBP9□□□□□ -0.97
Pcif1-201ENSMUST00000041643 Ly6c2P0CW03 131 aa9□□□□□ -0.97
Pcif1-201ENSMUST00000041643 Dand5Q76LW6 185 aa9□□□□□ -0.97
Pcif1-201ENSMUST00000041643 Gm6793B2RXM2 351 aa9□□□□□ -0.97
Pcif1-201ENSMUST00000041643 OdaphJ3QNT8 126 aa8.99□□□□□ -0.97
Pcif1-201ENSMUST00000041643 AcacbE9Q4Z2 2448 aa8.99□□□□□ -0.97
Pcif1-201ENSMUST00000041643 Trav12-3A0A075B648 115 aa8.99□□□□□ -0.97
Pcif1-201ENSMUST00000041643 Fam216aQ9DB54 251 aa8.99□□□□□ -0.97
Pcif1-201ENSMUST00000041643 Tanc2A2A690 1994 aa8.99□□□□□ -0.97
Pcif1-201ENSMUST00000041643 Gm29423A0A087WRM1 55 aa8.99□□□□□ -0.97
Pcif1-201ENSMUST00000041643 Gm5878E9PUB3 99 aa8.99□□□□□ -0.97
Pcif1-201ENSMUST00000041643 P01747 120 aa8.99□□□□□ -0.97
Pcif1-201ENSMUST00000041643 Ncor2Q9WU42 2472 aaKnown RBP8.99□□□□□ -0.97
Pcif1-201ENSMUST00000041643 P01896 185 aa8.99□□□□□ -0.97
Pcif1-201ENSMUST00000041643 Ca1P13634 261 aa8.99□□□□□ -0.97
Pcif1-201ENSMUST00000041643 Ang3P97802 145 aa8.99□□□□□ -0.97
Pcif1-201ENSMUST00000041643 Igkv4-62A0A0G2JDW9 117 aa8.99□□□□□ -0.97
Pcif1-201ENSMUST00000041643 Cox7a1P56392 80 aa8.99□□□□□ -0.97
Pcif1-201ENSMUST00000041643 Ppp1r32Q148A4 427 aa8.99□□□□□ -0.97
Pcif1-201ENSMUST00000041643 Gm12689Q8BQU9 117 aa8.99□□□□□ -0.97
Pcif1-201ENSMUST00000041643 Odf3Q920N1 254 aa8.99□□□□□ -0.97
Pcif1-201ENSMUST00000041643 Pgpep1Q9ESW8 209 aa8.99□□□□□ -0.97
Pcif1-201ENSMUST00000041643 Esm1Q9QYY7 184 aa8.99□□□□□ -0.97
Pcif1-201ENSMUST00000041643 Atp5g3P56384 141 aa8.98□□□□□ -0.97
Pcif1-201ENSMUST00000041643 AW146154Q3TPQ7 468 aa8.98□□□□□ -0.97
Pcif1-201ENSMUST00000041643 Atp5g1Q9CR84 136 aa8.98□□□□□ -0.97
Pcif1-201ENSMUST00000041643 PrcdQ00LT2 53 aa8.98□□□□□ -0.97
Pcif1-201ENSMUST00000041643 Dph3Q8K0W9 82 aa8.98□□□□□ -0.97
Pcif1-201ENSMUST00000041643 Mustn1Q99JI1 82 aa8.98□□□□□ -0.97
Pcif1-201ENSMUST00000041643 Spink12Q9D256 87 aa8.98□□□□□ -0.97
Pcif1-201ENSMUST00000041643 Ighv13-2A0A0A6YWN3 119 aa8.97□□□□□ -0.97
Pcif1-201ENSMUST00000041643 Trbv16A0A0B4J1H3 115 aa8.97□□□□□ -0.97
Pcif1-201ENSMUST00000041643 7420426K07RikQ3UX66 186 aa8.97□□□□□ -0.97
Pcif1-201ENSMUST00000041643 Gm5468Q8C3D3 155 aa8.97□□□□□ -0.97
Pcif1-201ENSMUST00000041643 Isg15Q64339 161 aaKnown RBP8.97□□□□□ -0.97
Pcif1-201ENSMUST00000041643 BC048562Q80ZQ7 204 aa8.97□□□□□ -0.97
Pcif1-201ENSMUST00000041643 PtprbB2RU80 1998 aa8.97□□□□□ -0.97
Pcif1-201ENSMUST00000041643 P06328 117 aa8.97□□□□□ -0.97
Pcif1-201ENSMUST00000041643 Tdgf1P51865 171 aa8.97□□□□□ -0.97
Pcif1-201ENSMUST00000041643 Vwc2lQ505H4 222 aa8.96□□□□□ -0.97
Pcif1-201ENSMUST00000041643 A530064D06RikQ8BNV8 229 aa8.96□□□□□ -0.97
Pcif1-201ENSMUST00000041643 Morn3Q8C5T4 241 aa8.96□□□□□ -0.97
Retrieved 100 of 22,080 RNA–protein pairs in 75.8 ms