RNA–Protein interactions for RNA: ENSMUST00000028280.13

Col5a1-201, Transcript of Collagen alpha-1(V) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col5a1, Length 8,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1-201ENSMUST00000028280 H2al1eQ810S6 105 aa11.13□□□□□ -0.63
Col5a1-201ENSMUST00000028280 Dpm3Q9D1Q4 92 aa11.13□□□□□ -0.63
Col5a1-201ENSMUST00000028280 Gm9936Q8C864 160 aa11.13□□□□□ -0.63
Col5a1-201ENSMUST00000028280 Klk11Q9QYN3 276 aa11.13□□□□□ -0.63
Col5a1-201ENSMUST00000028280 P04946 108 aa11.13□□□□□ -0.63
Col5a1-201ENSMUST00000028280 P01790 122 aa11.13□□□□□ -0.63
Col5a1-201ENSMUST00000028280 Tmem14cQ9CQN6 114 aa11.13□□□□□ -0.63
Col5a1-201ENSMUST00000028280 H2al1bA0A087WP11 105 aa11.12□□□□□ -0.63
Col5a1-201ENSMUST00000028280 Ighv5-9-1A0A0A6YVS4 126 aa11.12□□□□□ -0.63
Col5a1-201ENSMUST00000028280 9230102O04RikA2ASX7 82 aa11.12□□□□□ -0.63
Col5a1-201ENSMUST00000028280 Cspg4Q8VHY0 2327 aa11.12□□□□□ -0.63
Col5a1-201ENSMUST00000028280 Igkv8-18A0A0B4J1J3 123 aa11.12□□□□□ -0.63
Col5a1-201ENSMUST00000028280 Ang3P97802 145 aa11.12□□□□□ -0.63
Col5a1-201ENSMUST00000028280 Ighv1-55A0A075B5W6 117 aa11.12□□□□□ -0.63
Col5a1-201ENSMUST00000028280 Ighv8-8A0A0A6YXQ0 119 aa11.12□□□□□ -0.63
Col5a1-201ENSMUST00000028280 Gm44973A0A140LJJ1 189 aa11.12□□□□□ -0.63
Col5a1-201ENSMUST00000028280 Csrp1P97315 193 aaKnown RBP11.12□□□□□ -0.63
Col5a1-201ENSMUST00000028280 Trav4d-3A0A075B625 110 aa11.12□□□□□ -0.63
Col5a1-201ENSMUST00000028280 Smim10l1A0A087WNQ7 89 aa11.12□□□□□ -0.63
Col5a1-201ENSMUST00000028280 P01786 117 aa11.12□□□□□ -0.63
Col5a1-201ENSMUST00000028280 Cox7cP17665 63 aa11.12□□□□□ -0.63
Col5a1-201ENSMUST00000028280 Trav12-3A0A075B648 115 aa11.11□□□□□ -0.63
Col5a1-201ENSMUST00000028280 Lyg1Q9D7Q0 197 aa11.11□□□□□ -0.63
Col5a1-201ENSMUST00000028280 Gm20499D3Z4G5 72 aa11.11□□□□□ -0.63
Col5a1-201ENSMUST00000028280 Zfp11P10751 647 aa11.11□□□□□ -0.63
Col5a1-201ENSMUST00000028280 Bub3Q9WVA3 326 aa11.11□□□□□ -0.63
Col5a1-201ENSMUST00000028280 Znrd1Q791N7 123 aa11.11□□□□□ -0.63
Col5a1-201ENSMUST00000028280 Trav11A0A0B4J1J9 114 aa11.11□□□□□ -0.63
Col5a1-201ENSMUST00000028280 Atp5g3P56384 141 aa11.11□□□□□ -0.63
Col5a1-201ENSMUST00000028280 Atp5g1Q9CR84 136 aa11.11□□□□□ -0.63
Col5a1-201ENSMUST00000028280 Ncor1Q60974 2453 aa11.11□□□□□ -0.63
Col5a1-201ENSMUST00000028280 Vpreb3D3Z6J4 130 aa11.1□□□□□ -0.63
Col5a1-201ENSMUST00000028280 Gm12830F6XVH0 157 aa11.1□□□□□ -0.63
Col5a1-201ENSMUST00000028280 Igkv9-123A0A140T8N8 117 aa11.1□□□□□ -0.63
Col5a1-201ENSMUST00000028280 P01793 123 aa11.1□□□□□ -0.63
Col5a1-201ENSMUST00000028280 Minos1Q7TNS2 76 aa11.1□□□□□ -0.63
Col5a1-201ENSMUST00000028280 Naa38Q9D2U5 125 aa11.1□□□□□ -0.63
Col5a1-201ENSMUST00000028280 P18528 98 aa11.1□□□□□ -0.63
Col5a1-201ENSMUST00000028280 Pla2g5P97391 137 aa11.1□□□□□ -0.63
Col5a1-201ENSMUST00000028280 Hcfc1Q61191 2045 aaKnown RBP11.1□□□□□ -0.63
Col5a1-201ENSMUST00000028280 Spg11Q3UHA3 2430 aa11.1□□□□□ -0.63
Col5a1-201ENSMUST00000028280 Igkv5-37A0A140T8N4 115 aa11.09□□□□□ -0.63
Col5a1-201ENSMUST00000028280 Olfr311Q5NC59 308 aa11.09□□□□□ -0.63
Col5a1-201ENSMUST00000028280 Trav6-6A0A075B603 114 aa11.09□□□□□ -0.63
Col5a1-201ENSMUST00000028280 P01792 123 aa11.09□□□□□ -0.63
Col5a1-201ENSMUST00000028280 Vsig4F6TUL9 280 aa11.09□□□□□ -0.63
Col5a1-201ENSMUST00000028280 Igkv6-15A0A140T8M5 115 aa11.09□□□□□ -0.63
Col5a1-201ENSMUST00000028280 1700084M14RikB1AT01 78 aa11.09□□□□□ -0.63
Col5a1-201ENSMUST00000028280 Glrp1E9Q9S8 174 aa11.08□□□□□ -0.64
Col5a1-201ENSMUST00000028280 A730015C16RikQ8C992 119 aa11.08□□□□□ -0.64
Col5a1-201ENSMUST00000028280 CrygdP04342 174 aa11.08□□□□□ -0.64
Col5a1-201ENSMUST00000028280 Gm43517E9PYS1 339 aa11.08□□□□□ -0.64
Col5a1-201ENSMUST00000028280 Prp2P05143 317 aa11.08□□□□□ -0.64
Col5a1-201ENSMUST00000028280 Edn2P22389 175 aa11.08□□□□□ -0.64
Col5a1-201ENSMUST00000028280 Trav7-6A0A075B640 112 aa11.08□□□□□ -0.64
Col5a1-201ENSMUST00000028280 Col24a1Q30D77 1733 aa11.08□□□□□ -0.64
Col5a1-201ENSMUST00000028280 Gm12353A2AGJ4 60 aa11.07□□□□□ -0.64
Col5a1-201ENSMUST00000028280 Gm3618D3Z4P5 127 aa11.07□□□□□ -0.64
Col5a1-201ENSMUST00000028280 Defb26Q30KN7 186 aa11.07□□□□□ -0.64
Col5a1-201ENSMUST00000028280 P01791 123 aa11.07□□□□□ -0.64
Col5a1-201ENSMUST00000028280 P01789 122 aa11.07□□□□□ -0.64
Col5a1-201ENSMUST00000028280 Cox17P56394 63 aa11.07□□□□□ -0.64
Col5a1-201ENSMUST00000028280 Igkv3-5A0A140T8M6 119 aa11.06□□□□□ -0.64
Col5a1-201ENSMUST00000028280 Colca2F8VPY8 239 aa11.06□□□□□ -0.64
Col5a1-201ENSMUST00000028280 Lmo1Q924W9 156 aa11.06□□□□□ -0.64
Col5a1-201ENSMUST00000028280 Them7Q9DCP4 223 aa11.06□□□□□ -0.64
Col5a1-201ENSMUST00000028280 TectaO08523 2155 aa11.06□□□□□ -0.64
Col5a1-201ENSMUST00000028280 Col5a3Q9JLI2 1739 aa11.06□□□□□ -0.64
Col5a1-201ENSMUST00000028280 Ube2e1P52482 193 aa11.06□□□□□ -0.64
Col5a1-201ENSMUST00000028280 Mbd6Q3TY92 1003 aa11.06□□□□□ -0.64
Col5a1-201ENSMUST00000028280 Vpreb1P13372 142 aa11.06□□□□□ -0.64
Col5a1-201ENSMUST00000028280 AngP21570 145 aa11.06□□□□□ -0.64
Col5a1-201ENSMUST00000028280 Foxi2Q3I5G5 311 aa11.06□□□□□ -0.64
Col5a1-201ENSMUST00000028280 9530003J23RikQ8BM26 151 aa11.05□□□□□ -0.64
Col5a1-201ENSMUST00000028280 Ighv13-2A0A0A6YWN3 119 aa11.05□□□□□ -0.64
Col5a1-201ENSMUST00000028280 Trav4-3A0A0B4J1K1 110 aa11.05□□□□□ -0.64
Col5a1-201ENSMUST00000028280 P06330 118 aa11.05□□□□□ -0.64
Col5a1-201ENSMUST00000028280 Cd24P24807 76 aa11.05□□□□□ -0.64
Col5a1-201ENSMUST00000028280 Ndufb4Q9CQC7 129 aa11.05□□□□□ -0.64
Col5a1-201ENSMUST00000028280 Reg3gO09049 174 aa11.05□□□□□ -0.64
Col5a1-201ENSMUST00000028280 C730034F03RikQ8BGL5 111 aa11.05□□□□□ -0.64
Col5a1-201ENSMUST00000028280 Gm11733Q8BQP1 125 aa11.05□□□□□ -0.64
Col5a1-201ENSMUST00000028280 PtprbB2RU80 1998 aa11.04□□□□□ -0.64
Col5a1-201ENSMUST00000028280 Gm28539A0A087WSL9 92 aa11.04□□□□□ -0.64
Col5a1-201ENSMUST00000028280 Q80X32 188 aaKnown RBP11.04□□□□□ -0.64
Col5a1-201ENSMUST00000028280 Cryba4Q9JJV0 196 aa11.04□□□□□ -0.64
Col5a1-201ENSMUST00000028280 Inafm1E9PV59 130 aa11.04□□□□□ -0.64
Col5a1-201ENSMUST00000028280 Tmem254aP0DN89 123 aa11.04□□□□□ -0.64
Col5a1-201ENSMUST00000028280 Tmem254bP0DN90 123 aa11.04□□□□□ -0.64
Col5a1-201ENSMUST00000028280 Tmem254cP0DN91 123 aa11.04□□□□□ -0.64
Col5a1-201ENSMUST00000028280 NbasE9Q411 2356 aa11.03□□□□□ -0.64
Col5a1-201ENSMUST00000028280 Zic4Q61467 341 aa11.03□□□□□ -0.64
Col5a1-201ENSMUST00000028280 Nop10Q9CQS2 64 aa11.03□□□□□ -0.64
Col5a1-201ENSMUST00000028280 Cysrt1Q9D1E4 142 aa11.03□□□□□ -0.64
Col5a1-201ENSMUST00000028280 P01649 108 aa11.03□□□□□ -0.64
Col5a1-201ENSMUST00000028280 Tns1E9Q0S6 1888 aaKnown RBP11.03□□□□□ -0.64
Col5a1-201ENSMUST00000028280 GfyJ3KML8 504 aa11.03□□□□□ -0.64
Col5a1-201ENSMUST00000028280 Gm10384Q3UQ87 92 aa11.03□□□□□ -0.64
Col5a1-201ENSMUST00000028280 Atp6v0e2Q91XE7 81 aa11.03□□□□□ -0.64
Col5a1-201ENSMUST00000028280 Zc2hc1bQ9D534 172 aa11.03□□□□□ -0.64
Retrieved 100 of 22,080 RNA–protein pairs in 114.8 ms