RNA–Protein interactions for RNA: ENSMUST00000005705.7

Trim28-201, Transcript of Transcription intermediary factor 1-beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim28, Length 3,245 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28-201ENSMUST00000005705 Igkv4-57A0A0A6YYE7 117 aa12.39□□□□□ -0.43
Trim28-201ENSMUST00000005705 Gm10271F6WY25 52 aa12.39□□□□□ -0.43
Trim28-201ENSMUST00000005705 P01843 105 aa12.39□□□□□ -0.43
Trim28-201ENSMUST00000005705 Csn3P06796 181 aa12.39□□□□□ -0.43
Trim28-201ENSMUST00000005705 Trbv17A0A140T8P8 114 aa12.39□□□□□ -0.43
Trim28-201ENSMUST00000005705 Tmem170bP86050 132 aa12.39□□□□□ -0.43
Trim28-201ENSMUST00000005705 7420426K07RikQ3UX66 186 aa12.39□□□□□ -0.43
Trim28-201ENSMUST00000005705 Pgpep1lQ9CWB5 130 aa12.39□□□□□ -0.43
Trim28-201ENSMUST00000005705 1520401A03RikA0A0J9YVH6 598 aa12.39□□□□□ -0.43
Trim28-201ENSMUST00000005705 Gm44965A0A0N4SVR3 59 aa12.39□□□□□ -0.43
Trim28-201ENSMUST00000005705 Igkv20-101-2A0A0G2JDU3 113 aa12.38□□□□□ -0.43
Trim28-201ENSMUST00000005705 Gm9513B3GLJ6 99 aa12.38□□□□□ -0.43
Trim28-201ENSMUST00000005705 P01748 117 aa12.38□□□□□ -0.43
Trim28-201ENSMUST00000005705 Chac1Q8R3J5 223 aa12.38□□□□□ -0.43
Trim28-201ENSMUST00000005705 Tep1P97499 2629 aa12.38□□□□□ -0.43
Trim28-201ENSMUST00000005705 Ighv1-77A0A0G2JGS9 117 aa12.37□□□□□ -0.43
Trim28-201ENSMUST00000005705 Scgb1b24B1B0N6 92 aa12.37□□□□□ -0.43
Trim28-201ENSMUST00000005705 GlrxQ9QUH0 107 aa12.37□□□□□ -0.43
Trim28-201ENSMUST00000005705 Ndufa4l2Q4FZG9 87 aa12.37□□□□□ -0.43
Trim28-201ENSMUST00000005705 Bub3Q9WVA3 326 aa12.37□□□□□ -0.43
Trim28-201ENSMUST00000005705 NipblQ6KCD5 2798 aaKnown RBP12.37□□□□□ -0.43
Trim28-201ENSMUST00000005705 Fhl1P97447 280 aaKnown RBP12.37□□□□□ -0.43
Trim28-201ENSMUST00000005705 Olfr312Q7TRZ9 308 aa12.37□□□□□ -0.43
Trim28-201ENSMUST00000005705 Gm14137Q8CE97 175 aa12.37□□□□□ -0.43
Trim28-201ENSMUST00000005705 Smim20D3Z7Q2 69 aa12.36□□□□□ -0.43
Trim28-201ENSMUST00000005705 Hist1h1tQ07133 208 aa12.36□□□□□ -0.43
Trim28-201ENSMUST00000005705 Amn1B8JKV0 258 aa12.36□□□□□ -0.43
Trim28-201ENSMUST00000005705 Fam240aJ3QNP9 97 aa12.36□□□□□ -0.43
Trim28-201ENSMUST00000005705 Ndufa1O35683 70 aa12.36□□□□□ -0.43
Trim28-201ENSMUST00000005705 Parm1Q923D3 296 aa12.36□□□□□ -0.43
Trim28-201ENSMUST00000005705 Pgpep1Q9ESW8 209 aa12.36□□□□□ -0.43
Trim28-201ENSMUST00000005705 Esp3J3QN49 87 aa12.35□□□□□ -0.43
Trim28-201ENSMUST00000005705 Gm10553J3QPF1 123 aa12.35□□□□□ -0.43
Trim28-201ENSMUST00000005705 Gm5941Q497P9 117 aa12.35□□□□□ -0.43
Trim28-201ENSMUST00000005705 Minos1Q7TNS2 76 aa12.35□□□□□ -0.43
Trim28-201ENSMUST00000005705 Ndufa11Q9D8B4 141 aa12.35□□□□□ -0.43
Trim28-201ENSMUST00000005705 Gm29666A0A087WQ99 126 aa12.35□□□□□ -0.43
Trim28-201ENSMUST00000005705 Casp6O08738 276 aa12.35□□□□□ -0.43
Trim28-201ENSMUST00000005705 Mrpl36Q99N90 102 aa12.35□□□□□ -0.43
Trim28-201ENSMUST00000005705 Igkv2-137A0A0B4J1H6 120 aa12.34□□□□□ -0.43
Trim28-201ENSMUST00000005705 Ebi3O35228 228 aa12.34□□□□□ -0.43
Trim28-201ENSMUST00000005705 Olfr553Q7TRS6 326 aa12.34□□□□□ -0.43
Trim28-201ENSMUST00000005705 Umad1E0CX23 159 aa12.34□□□□□ -0.43
Trim28-201ENSMUST00000005705 P01726 129 aa12.34□□□□□ -0.43
Trim28-201ENSMUST00000005705 P01747 120 aa12.34□□□□□ -0.43
Trim28-201ENSMUST00000005705 NrepQ07475 68 aa12.34□□□□□ -0.43
Trim28-201ENSMUST00000005705 Srsf1Q6PDM2 248 aaKnown RBP12.34□□□□□ -0.43
Trim28-201ENSMUST00000005705 Prr13Q9CQJ5 137 aa12.34□□□□□ -0.43
Trim28-201ENSMUST00000005705 Tmem238lA0A1B0GS74 79 aa12.33□□□□□ -0.43
Trim28-201ENSMUST00000005705 Ins2P01326 110 aa12.33□□□□□ -0.43
Trim28-201ENSMUST00000005705 Tdgf1P51865 171 aa12.33□□□□□ -0.43
Trim28-201ENSMUST00000005705 Mustn1Q99JI1 82 aa12.33□□□□□ -0.43
Trim28-201ENSMUST00000005705 2310009B15RikA0A0A6YWI4 143 aa12.33□□□□□ -0.44
Trim28-201ENSMUST00000005705 BC048562Q80ZQ7 204 aa12.33□□□□□ -0.44
Trim28-201ENSMUST00000005705 Gm42674D3YUT9 64 aa12.33□□□□□ -0.44
Trim28-201ENSMUST00000005705 ColqO35348 457 aa12.33□□□□□ -0.44
Trim28-201ENSMUST00000005705 P01725 110 aa12.33□□□□□ -0.44
Trim28-201ENSMUST00000005705 Tmem89Q9DA04 169 aa12.33□□□□□ -0.44
Trim28-201ENSMUST00000005705 Ighv1-80A0A075B5Y3 117 aa12.32□□□□□ -0.44
Trim28-201ENSMUST00000005705 Hbb-bsA8DUK4 147 aa12.32□□□□□ -0.44
Trim28-201ENSMUST00000005705 Hbb-b1P02088 147 aa12.32□□□□□ -0.44
Trim28-201ENSMUST00000005705 CrygbP04344 175 aa12.32□□□□□ -0.44
Trim28-201ENSMUST00000005705 Cox7cP17665 63 aa12.32□□□□□ -0.44
Trim28-201ENSMUST00000005705 Srsf9Q9D0B0 222 aaKnown RBP12.32□□□□□ -0.44
Trim28-201ENSMUST00000005705 Snai3Q9QY31 287 aa12.32□□□□□ -0.44
Trim28-201ENSMUST00000005705 Spink10Q8CAC8 162 aa12.32□□□□□ -0.44
Trim28-201ENSMUST00000005705 Gm26938S4R185 226 aa12.32□□□□□ -0.44
Trim28-201ENSMUST00000005705 TctaQ8VEA7 122 aa12.32□□□□□ -0.44
Trim28-201ENSMUST00000005705 MrapQ9D159 127 aa12.32□□□□□ -0.44
Trim28-201ENSMUST00000005705 P06334 169 aa12.31□□□□□ -0.44
Trim28-201ENSMUST00000005705 Klk5Q9D140 293 aa12.31□□□□□ -0.44
Trim28-201ENSMUST00000005705 Pradc1Q9D9N8 188 aa12.31□□□□□ -0.44
Trim28-201ENSMUST00000005705 Usp9yF8VPU6 2556 aa12.31□□□□□ -0.44
Trim28-201ENSMUST00000005705 Epg5Q80TA9 2572 aa12.31□□□□□ -0.44
Trim28-201ENSMUST00000005705 Ighv1-74A0A0G2JGK2 117 aa12.31□□□□□ -0.44
Trim28-201ENSMUST00000005705 Mrps12O35680 139 aa12.31□□□□□ -0.44
Trim28-201ENSMUST00000005705 Tctex1d4Q8CDY7 219 aa12.31□□□□□ -0.44
Trim28-201ENSMUST00000005705 Rasl11bQ922H7 247 aa12.31□□□□□ -0.44
Trim28-201ENSMUST00000005705 Plac1Q9JI83 173 aa12.31□□□□□ -0.44
Trim28-201ENSMUST00000005705 P01812 117 aa12.3□□□□□ -0.44
Trim28-201ENSMUST00000005705 P04219 140 aa12.3□□□□□ -0.44
Trim28-201ENSMUST00000005705 Gm5464Q3UY29 175 aa12.3□□□□□ -0.44
Trim28-201ENSMUST00000005705 Hspe1Q64433 102 aaKnown RBP12.3□□□□□ -0.44
Trim28-201ENSMUST00000005705 3110018I06RikQ9CXS0 120 aa12.3□□□□□ -0.44
Trim28-201ENSMUST00000005705 Obox1Q9D350 204 aa12.3□□□□□ -0.44
Trim28-201ENSMUST00000005705 Esp4A8R0T8 117 aa12.3□□□□□ -0.44
Trim28-201ENSMUST00000005705 TshbP12656 138 aa12.3□□□□□ -0.44
Trim28-201ENSMUST00000005705 Runx1Q03347 451 aa12.3□□□□□ -0.44
Trim28-201ENSMUST00000005705 Tal2Q62282 108 aa12.3□□□□□ -0.44
Trim28-201ENSMUST00000005705 CubnQ9JLB4 3623 aa12.3□□□□□ -0.44
Trim28-201ENSMUST00000005705 Psmg4P0C7N9 123 aa12.3□□□□□ -0.44
Trim28-201ENSMUST00000005705 Lrcol1Q3URS3 161 aa12.3□□□□□ -0.44
Trim28-201ENSMUST00000005705 Zfand3Q497H0 227 aa12.3□□□□□ -0.44
Trim28-201ENSMUST00000005705 Ighv1-23A0A0A6YVW3 117 aa12.29□□□□□ -0.44
Trim28-201ENSMUST00000005705 Lyrm7Q9DA03 104 aa12.29□□□□□ -0.44
Trim28-201ENSMUST00000005705 Rab37Q9JKM7 223 aa12.29□□□□□ -0.44
Trim28-201ENSMUST00000005705 OtogO55225 2910 aa12.29□□□□□ -0.44
Trim28-201ENSMUST00000005705 Cdx4Q07424 282 aa12.29□□□□□ -0.44
Trim28-201ENSMUST00000005705 Lgals6O54891 301 aa12.28□□□□□ -0.44
Trim28-201ENSMUST00000005705 Sdhaf1Q3U276 118 aa12.28□□□□□ -0.44
Retrieved 100 of 22,080 RNA–protein pairs in 69.6 ms