RNA–Protein interactions for RNA: snR49

snR49, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeastyeast

Gene snR49, Length 165 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR49snR49 YGR153WP48238 217 aa2.05□□□□□ -2.08
snR49snR49 ACS1Q01574 713 aa2.05□□□□□ -2.08
snR49snR49 YHM2Q04013 314 aa2.05□□□□□ -2.08
snR49snR49 LCB4Q12246 624 aa2.05□□□□□ -2.08
snR49snR49 DGR2P32330 852 aa2.04□□□□□ -2.08
snR49snR49 PLC1P32383 869 aa2.04□□□□□ -2.08
snR49snR49 SDA1P53313 767 aaKnown RBP2.04□□□□□ -2.08
snR49snR49 SQS1P53866 767 aaKnown RBP2.04□□□□□ -2.08
snR49snR49 UBP16Q02863 499 aa2.04□□□□□ -2.08
snR49snR49 PLM2Q04383 521 aa2.04□□□□□ -2.08
snR49snR49 YER175W-AQ8TGU4 54 aa2.04□□□□□ -2.08
snR49snR49 APM4Q99186 491 aa2.04□□□□□ -2.08
snR49snR49 SEC12P11655 471 aa2.03□□□□□ -2.08
snR49snR49 CBP3P21560 335 aa2.03□□□□□ -2.08
snR49snR49 PRP19P32523 503 aaKnown RBP2.03□□□□□ -2.08
snR49snR49 SLX1P38324 304 aa2.03□□□□□ -2.08
snR49snR49 MAM1P40065 302 aa2.03□□□□□ -2.08
snR49snR49 PEF1P53238 335 aa2.03□□□□□ -2.08
snR49snR49 YNL144CP53907 740 aa2.03□□□□□ -2.08
snR49snR49 ORC1P54784 914 aaPredicted RBP2.03□□□□□ -2.08
snR49snR49 CDC23P16522 626 aa2.02□□□□□ -2.09
snR49snR49 HXT4P32467 576 aa2.02□□□□□ -2.09
snR49snR49 RKM3P38222 552 aa2.02□□□□□ -2.09
snR49snR49 IMP4P53941 290 aaKnown RBP2.02□□□□□ -2.09
snR49snR49 YML053CQ04978 212 aa2.02□□□□□ -2.09
snR49snR49 FMP42Q04991 504 aa2.02□□□□□ -2.09
snR49snR49 YLR281CQ05863 155 aa2.02□□□□□ -2.09
snR49snR49 GPN2Q08726 347 aaPredicted RBP2.02□□□□□ -2.09
snR49snR49 TIP41Q12199 356 aa2.02□□□□□ -2.09
snR49snR49 SES1P07284 462 aaKnown RBP2.01□□□□□ -2.09
snR49snR49 PRP16P15938 1071 aaPredicted RBP2.01□□□□□ -2.09
snR49snR49 NIC96P34077 839 aa2.01□□□□□ -2.09
snR49snR49 ARN1P38731 627 aa2.01□□□□□ -2.09
snR49snR49 RRP8P38961 392 aaKnown RBP2.01□□□□□ -2.09
snR49snR49 PCL6P40038 420 aa2.01□□□□□ -2.09
snR49snR49 UBP7P40453 1071 aa2.01□□□□□ -2.09
snR49snR49 QRI7P43122 407 aa2.01□□□□□ -2.09
snR49snR49 ORC5P50874 479 aa2.01□□□□□ -2.09
snR49snR49 PTA1Q01329 785 aaPredicted RBP2.01□□□□□ -2.09
snR49snR49 SND1Q04007 877 aa2.01□□□□□ -2.09
snR49snR49 SEC1P30619 724 aaKnown RBP2□□□□□ -2.09
snR49snR49 GSH1P32477 678 aa2□□□□□ -2.09
snR49snR49 EXO84P38261 753 aa2□□□□□ -2.09
snR49snR49 OCA5P38738 679 aa2□□□□□ -2.09
snR49snR49 AZF1P41696 914 aa2□□□□□ -2.09
snR49snR49 GZF3P42944 551 aaKnown RBP2□□□□□ -2.09
snR49snR49 COS12P53053 380 aa2□□□□□ -2.09
snR49snR49 YAT1P80235 687 aa2□□□□□ -2.09
snR49snR49 FCP1Q03254 732 aa2□□□□□ -2.09
snR49snR49 YLR352WQ06479 807 aa2□□□□□ -2.09
snR49snR49 YDL242WQ07746 117 aa2□□□□□ -2.09
snR49snR49 NGL1Q08213 363 aaKnown RBP2□□□□□ -2.09
snR49snR49 RSA1Q08932 381 aa2□□□□□ -2.09
snR49snR49 RPL8AP17076 256 aaKnown RBP1.99□□□□□ -2.09
snR49snR49 AEP2P22136 580 aa1.99□□□□□ -2.09
snR49snR49 MNN2P38069 597 aa1.99□□□□□ -2.09
snR49snR49 BZZ1P38822 633 aa1.99□□□□□ -2.09
snR49snR49 VPS41P38959 992 aa1.99□□□□□ -2.09
snR49snR49 MTQ2Q03920 221 aaPredicted RBP1.99□□□□□ -2.09
snR49snR49 YLR112WQ12130 139 aa1.99□□□□□ -2.09
snR49snR49 ATP12P22135 325 aa1.98□□□□□ -2.09
snR49snR49 SAN1P22470 610 aa1.98□□□□□ -2.09
snR49snR49 CWH43P25618 953 aa1.98□□□□□ -2.09
snR49snR49 DID4P36108 232 aa1.98□□□□□ -2.09
snR49snR49 TYS1P36421 394 aaKnown RBP1.98□□□□□ -2.09
snR49snR49 FAA2P39518 744 aa1.98□□□□□ -2.09
snR49snR49 ROK1P45818 564 aaPredicted RBP1.98□□□□□ -2.09
snR49snR49 MNN11P46985 422 aaKnown RBP1.98□□□□□ -2.09
snR49snR49 MDR1P53258 950 aa1.98□□□□□ -2.09
snR49snR49 RNH70P53331 553 aa1.98□□□□□ -2.09
snR49snR49 IZH1Q03419 316 aa1.98□□□□□ -2.09
snR49snR49 APL5Q08951 932 aaKnown RBP1.98□□□□□ -2.09
snR49snR49 NOP56Q12460 504 aaKnown RBP RIP-Chip data1.98□□□□□ -2.09not detected
snR49snR49 KGD2P19262 463 aaPredicted RBP1.97□□□□□ -2.09
snR49snR49 ARG1P22768 420 aa1.97□□□□□ -2.09
snR49snR49 VBA2P38358 474 aaKnown RBP1.97□□□□□ -2.09
snR49snR49 STB5P38699 743 aa1.97□□□□□ -2.09
snR49snR49 ARO9P38840 513 aaPredicted RBP1.97□□□□□ -2.09
snR49snR49 ASG1P40467 964 aa1.97□□□□□ -2.09
snR49snR49 CRZ1P53968 678 aa1.97□□□□□ -2.09
snR49snR49 FPR4Q06205 392 aaPredicted RBP1.97□□□□□ -2.09
snR49snR49 YTM1Q12024 460 aaPredicted RBP1.97□□□□□ -2.09
snR49snR49 KRE9P39005 276 aa1.96□□□□□ -2.1
snR49snR49 TPA1P40032 644 aaKnown RBP1.96□□□□□ -2.1
snR49snR49 IRC5P43610 853 aa1.96□□□□□ -2.1
snR49snR49 VPS25P47142 202 aa1.96□□□□□ -2.1
snR49snR49 EAF7P53911 425 aaKnown RBP1.96□□□□□ -2.1
snR49snR49 ARP9Q05123 467 aa1.96□□□□□ -2.1
snR49snR49 PDR8Q06149 701 aa1.96□□□□□ -2.1
snR49snR49 YOR378WQ08902 515 aa1.96□□□□□ -2.1
snR49snR49 TAH18Q12181 623 aa1.96□□□□□ -2.1
snR49snR49 VPS5Q92331 675 aa1.96□□□□□ -2.1
snR49snR49 NOP14Q99207 810 aaKnown RBP1.96□□□□□ -2.1
snR49snR49 ILV2P07342 687 aaKnown RBP1.95□□□□□ -2.1
snR49snR49 PTC6P25646 442 aa1.95□□□□□ -2.1
snR49snR49 MSS51P32335 436 aa1.95□□□□□ -2.1
snR49snR49 SER1P33330 395 aaKnown RBP1.95□□□□□ -2.1
snR49snR49 CDC1P40986 491 aa1.95□□□□□ -2.1
snR49snR49 PSP1P50896 841 aaKnown RBP1.95□□□□□ -2.1
snR49snR49 YGL036WP53185 909 aaPredicted RBP1.95□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 59 ms