RNA–Protein interactions for RNA: snR40

snR40, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR40, Length 97 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR40snR40 DEG1P31115 442 aaKnown RBP-1.24□□□□□ -2.61
snR40snR40 ABD1P32783 436 aaPredicted RBP-1.24□□□□□ -2.61
snR40snR40 BEM4P39011 633 aa-1.24□□□□□ -2.61
snR40snR40 TPA1P40032 644 aaKnown RBP-1.24□□□□□ -2.61
snR40snR40 TMN3P40071 706 aa-1.24□□□□□ -2.61
snR40snR40 RLP7P40693 322 aaKnown RBP-1.24□□□□□ -2.61
snR40snR40 UBX6P47049 396 aa-1.24□□□□□ -2.61
snR40snR40 ALT2P52892 507 aa-1.24□□□□□ -2.61
snR40snR40 YPL014WQ02606 381 aa-1.24□□□□□ -2.61
snR40snR40 USA1Q03714 838 aa-1.24□□□□□ -2.61
snR40snR40 RSF1Q05043 376 aa-1.24□□□□□ -2.61
snR40snR40 ARR3Q06598 404 aa-1.24□□□□□ -2.61
snR40snR40 YOL159CQ08300 171 aa-1.24□□□□□ -2.61
snR40snR40 YPQ1Q12010 308 aa-1.24□□□□□ -2.61
snR40snR40 DIF1O13577 133 aa-1.25□□□□□ -2.61
snR40snR40 ADH2P00331 348 aaKnown RBP-1.25□□□□□ -2.61
snR40snR40 GUK1P15454 187 aaKnown RBP-1.25□□□□□ -2.61
snR40snR40 MCM3P24279 971 aaKnown RBP-1.25□□□□□ -2.61
snR40snR40 KIN82P25341 720 aa-1.25□□□□□ -2.61
snR40snR40 RVS161P25343 265 aaKnown RBP-1.25□□□□□ -2.61
snR40snR40 RPS26AP39938 119 aaKnown RBP-1.25□□□□□ -2.61
snR40snR40 RPS26BP39939 119 aaKnown RBP-1.25□□□□□ -2.61
snR40snR40 YFR016CP43597 1233 aaKnown RBP-1.25□□□□□ -2.61
snR40snR40 BIT61P47041 543 aa-1.25□□□□□ -2.61
snR40snR40 MTD1Q02046 320 aaKnown RBP-1.25□□□□□ -2.61
snR40snR40 YDR338CQ05497 695 aa-1.25□□□□□ -2.61
snR40snR40 HRT1Q08273 121 aa-1.25□□□□□ -2.61
snR40snR40 SET6Q12529 373 aa-1.25□□□□□ -2.61
snR40snR40 TOM70P07213 617 aaKnown RBP-1.26□□□□□ -2.61
snR40snR40 GDA1P32621 518 aa-1.26□□□□□ -2.61
snR40snR40 LEU5P38702 357 aa-1.26□□□□□ -2.61
snR40snR40 YJL068CP40363 299 aa-1.26□□□□□ -2.61
snR40snR40 SNG1P46950 547 aa-1.26□□□□□ -2.61
snR40snR40 YGR054WP53235 642 aaKnown RBP-1.26□□□□□ -2.61
snR40snR40 ATG21Q02887 496 aa-1.26□□□□□ -2.61
snR40snR40 ERP1Q05359 219 aaKnown RBP-1.26□□□□□ -2.61
snR40snR40 YER078W-AQ3E7A2 54 aa-1.26□□□□□ -2.61
snR40snR40 PRP8P33334 2413 aaKnown RBP-1.27□□□□□ -2.61
snR40snR40 TEF1P02994 458 aaKnown RBP-1.27□□□□□ -2.61
snR40snR40 OLE1P21147 510 aaKnown RBP-1.27□□□□□ -2.61
snR40snR40 PAD1P33751 242 aaKnown RBP RIP-Chip data-1.27□□□□□ -2.61not detected
snR40snR40 EMC3P36039 253 aa-1.27□□□□□ -2.61
snR40snR40 RPR2P40571 144 aa-1.27□□□□□ -2.61
snR40snR40 YNL092WP53934 400 aa-1.27□□□□□ -2.61
snR40snR40 MOT3P54785 490 aaKnown RBP-1.27□□□□□ -2.61
snR40snR40 REH1Q06709 432 aa-1.27□□□□□ -2.61
snR40snR40 CIT1P00890 479 aa-1.28□□□□□ -2.61
snR40snR40 SNF3P10870 884 aa-1.28□□□□□ -2.61
snR40snR40 KGD1P20967 1014 aaKnown RBP-1.28□□□□□ -2.61
snR40snR40 CAP1P28495 268 aaKnown RBP-1.28□□□□□ -2.61
snR40snR40 SBA1P28707 216 aaKnown RBP-1.28□□□□□ -2.61
snR40snR40 RAD16P31244 790 aa-1.28□□□□□ -2.61
snR40snR40 DHR2P36009 735 aaPredicted RBP-1.28□□□□□ -2.61
snR40snR40 YPK3P38070 525 aa-1.28□□□□□ -2.61
snR40snR40 ARK1P53974 638 aa-1.28□□□□□ -2.61
snR40snR40 RMD1Q03441 430 aa-1.28□□□□□ -2.61
snR40snR40 YBL113CQ7M4S9 792 aa-1.28□□□□□ -2.61
snR40snR40 YEF3P16521 1044 aaKnown RBP-1.29□□□□□ -2.62
snR40snR40 RRP43P25359 394 aaPredicted RBP-1.29□□□□□ -2.62
snR40snR40 PDR3P33200 976 aa-1.29□□□□□ -2.62
snR40snR40 YBL059WP34224 193 aa-1.29□□□□□ -2.62
snR40snR40 VID24P38263 362 aa-1.29□□□□□ -2.62
snR40snR40 NMD2P38798 1089 aaKnown RBP-1.29□□□□□ -2.62
snR40snR40 NDT80P38830 627 aa-1.29□□□□□ -2.62
snR40snR40 MET10P39692 1035 aa-1.29□□□□□ -2.62
snR40snR40 VPS8P39702 1274 aa-1.29□□□□□ -2.62
snR40snR40 SEO1P39709 593 aa-1.29□□□□□ -2.62
snR40snR40 DOT6P40059 670 aaKnown RBP-1.29□□□□□ -2.62
snR40snR40 BNA2P47125 453 aa-1.29□□□□□ -2.62
snR40snR40 UBP8P50102 471 aa-1.29□□□□□ -2.62
snR40snR40 ARP4P80428 489 aa-1.29□□□□□ -2.62
snR40snR40 FDC1Q03034 503 aa-1.29□□□□□ -2.62
snR40snR40 AIM32Q04689 311 aa-1.29□□□□□ -2.62
snR40snR40 PDR8Q06149 701 aa-1.29□□□□□ -2.62
snR40snR40 PIG1Q06216 648 aa-1.29□□□□□ -2.62
snR40snR40 GRC3Q07845 632 aa-1.29□□□□□ -2.62
snR40snR40 YPR071WQ12346 211 aa-1.29□□□□□ -2.62
snR40snR40 WTM1Q12363 437 aaKnown RBP-1.29□□□□□ -2.62
snR40snR40 APC2Q12440 853 aa-1.29□□□□□ -2.62
snR40snR40 YBR056W-AI2HB52 66 aa-1.3□□□□□ -2.62
snR40snR40 YPK1P12688 680 aaKnown RBP-1.3□□□□□ -2.62
snR40snR40 CDC34P14682 295 aa-1.3□□□□□ -2.62
snR40snR40 AGP1P25376 633 aa-1.3□□□□□ -2.62
snR40snR40 MRC1P25588 1096 aa-1.3□□□□□ -2.62
snR40snR40 SMY1P32364 656 aaKnown RBP-1.3□□□□□ -2.62
snR40snR40 HBS1P32769 611 aaKnown RBP-1.3□□□□□ -2.62
snR40snR40 YHR219WP38900 624 aa-1.3□□□□□ -2.62
snR40snR40 FTR1P40088 404 aa-1.3□□□□□ -2.62
snR40snR40 RTT101P47050 842 aa-1.3□□□□□ -2.62
snR40snR40 RPN14P53196 417 aa-1.3□□□□□ -2.62
snR40snR40 HNT3Q08702 217 aa-1.3□□□□□ -2.62
snR40snR40 KEL3Q08979 651 aaPredicted RBP-1.3□□□□□ -2.62
snR40snR40 VPS54Q12071 889 aa-1.3□□□□□ -2.62
snR40snR40 Q0010Q9ZZX9 128 aa-1.3□□□□□ -2.62
snR40snR40 MSS51P32335 436 aa-1.31□□□□□ -2.62
snR40snR40 APN2P38207 520 aa-1.31□□□□□ -2.62
snR40snR40 SPO73P40031 143 aa-1.31□□□□□ -2.62
snR40snR40 TMA108P40462 946 aa-1.31□□□□□ -2.62
snR40snR40 RPM2Q02773 1202 aa-1.31□□□□□ -2.62
snR40snR40 TIM50Q02776 476 aa-1.31□□□□□ -2.62
Retrieved 100 of 5,963 RNA–protein pairs in 22.9 ms