RNA–Protein interactions for RNA: snR38

snR38, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR38, Length 95 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR38snR38 YDL186WP48568 277 aa0□□□□□ -2.41
snR38snR38 CAC2Q04199 468 aa0□□□□□ -2.41
snR38snR38 YPR091CQ06833 770 aa0□□□□□ -2.41
snR38snR38 YDL124WQ07551 312 aaKnown RBP0□□□□□ -2.41
snR38snR38 RTC1Q08281 1341 aa-0.01□□□□□ -2.41
snR38snR38 SUP35P05453 685 aaKnown RBP-0.01□□□□□ -2.41
snR38snR38 PRI2P20457 528 aa-0.01□□□□□ -2.41
snR38snR38 MGR1P25573 417 aa-0.01□□□□□ -2.41
snR38snR38 MRP21P38175 177 aa-0.01□□□□□ -2.41
snR38snR38 RCK2P38623 610 aa-0.01□□□□□ -2.41
snR38snR38 YHR202WP38887 602 aa-0.01□□□□□ -2.41
snR38snR38 YJL213WP40896 331 aa-0.01□□□□□ -2.41
snR38snR38 DIM1P41819 318 aaKnown RBP-0.01□□□□□ -2.41
snR38snR38 YJR039WP47107 1121 aa-0.01□□□□□ -2.41
snR38snR38 YMR178WQ03219 274 aaKnown RBP-0.01□□□□□ -2.41
snR38snR38 RSF1Q05043 376 aa-0.01□□□□□ -2.41
snR38snR38 YOL159CQ08300 171 aa-0.01□□□□□ -2.41
snR38snR38 MRN1Q08925 612 aaKnown RBP RIP-Chip data-0.01□□□□□ -2.41not detected
snR38snR38 AIM41Q12032 185 aa-0.01□□□□□ -2.41
snR38snR38 CBP1P07252 654 aa-0.02□□□□□ -2.41
snR38snR38 BET2P20133 325 aa-0.02□□□□□ -2.41
snR38snR38 ARE1P25628 610 aa-0.02□□□□□ -2.41
snR38snR38 SFP1P32432 683 aa-0.02□□□□□ -2.41
snR38snR38 GDA1P32621 518 aa-0.02□□□□□ -2.41
snR38snR38 YKL069WP36088 180 aa-0.02□□□□□ -2.41
snR38snR38 SSZ1P38788 538 aaKnown RBP-0.02□□□□□ -2.41
snR38snR38 YJL068CP40363 299 aa-0.02□□□□□ -2.41
snR38snR38 BRE5P53741 515 aaKnown RBP-0.02□□□□□ -2.41
snR38snR38 YNL234WP53857 426 aa-0.02□□□□□ -2.41
snR38snR38 TIM50Q02776 476 aa-0.02□□□□□ -2.41
snR38snR38 PLM2Q04383 521 aa-0.02□□□□□ -2.41
snR38snR38 SWF1Q04629 336 aa-0.02□□□□□ -2.41
snR38snR38 RAD34Q06665 692 aa-0.02□□□□□ -2.41
snR38snR38 UBX5Q06682 500 aa-0.02□□□□□ -2.41
snR38snR38 RFM1Q12192 310 aa-0.02□□□□□ -2.41
snR38snR38 SAL1D6W196 494 aa-0.03□□□□□ -2.41
snR38snR38 PRB1P09232 635 aa-0.03□□□□□ -2.41
snR38snR38 ATE1P16639 503 aa-0.03□□□□□ -2.41
snR38snR38 PLC1P32383 869 aa-0.03□□□□□ -2.41
snR38snR38 YHR033WP38690 423 aa-0.03□□□□□ -2.41
snR38snR38 ERV46P39727 415 aa-0.03□□□□□ -2.41
snR38snR38 DOT6P40059 670 aaKnown RBP-0.03□□□□□ -2.41
snR38snR38 YGL036WP53185 909 aaPredicted RBP-0.03□□□□□ -2.41
snR38snR38 NOP15P53927 220 aaPredicted RBP-0.03□□□□□ -2.41
snR38snR38 DIA1P54005 336 aa-0.03□□□□□ -2.41
snR38snR38 ACS1Q01574 713 aa-0.03□□□□□ -2.41
snR38snR38 SMA1Q02651 245 aa-0.03□□□□□ -2.41
snR38snR38 PDR8Q06149 701 aa-0.03□□□□□ -2.41
snR38snR38 FMP25Q08023 583 aa-0.03□□□□□ -2.41
snR38snR38 BSC1Q12140 328 aa-0.03□□□□□ -2.41
snR38snR38 TUF1P02992 437 aaKnown RBP-0.04□□□□□ -2.42
snR38snR38 CAN1P04817 590 aa-0.04□□□□□ -2.42
snR38snR38 STE5P32917 917 aa-0.04□□□□□ -2.42
snR38snR38 STO1P34160 861 aaKnown RBP-0.04□□□□□ -2.42
snR38snR38 YPK3P38070 525 aa-0.04□□□□□ -2.42
snR38snR38 CRG1P38892 291 aaRIP-Chip data-0.04□□□□□ -2.42not detected
snR38snR38 YEN1P40028 759 aa-0.04□□□□□ -2.42
snR38snR38 FTR1P40088 404 aa-0.04□□□□□ -2.42
snR38snR38 YPS6P40583 537 aa-0.04□□□□□ -2.42
snR38snR38 MAD1P40957 749 aa-0.04□□□□□ -2.42
snR38snR38 IAH1P41734 238 aa-0.04□□□□□ -2.42
snR38snR38 YAT1P80235 687 aa-0.04□□□□□ -2.42
snR38snR38 NHX1Q04121 633 aa-0.04□□□□□ -2.42
snR38snR38 MCH4Q08268 501 aa-0.04□□□□□ -2.42
snR38snR38 CTT1P06115 562 aa-0.05□□□□□ -2.42
snR38snR38 ILV2P07342 687 aaKnown RBP-0.05□□□□□ -2.42
snR38snR38 RRP43P25359 394 aaPredicted RBP-0.05□□□□□ -2.42
snR38snR38 IMG2P25642 146 aaPredicted RBP-0.05□□□□□ -2.42
snR38snR38 AGA1P32323 725 aa-0.05□□□□□ -2.42
snR38snR38 ASF1P32447 279 aa-0.05□□□□□ -2.42
snR38snR38 CDC5P32562 705 aa-0.05□□□□□ -2.42
snR38snR38 YME1P32795 747 aa-0.05□□□□□ -2.42
snR38snR38 CHK1P38147 527 aa-0.05□□□□□ -2.42
snR38snR38 RRP3P38712 501 aaKnown RBP-0.05□□□□□ -2.42
snR38snR38 YJL193WP39542 402 aa-0.05□□□□□ -2.42
snR38snR38 LRO1P40345 661 aa-0.05□□□□□ -2.42
snR38snR38 BFA1P47113 574 aa-0.05□□□□□ -2.42
snR38snR38 DNM1P54861 757 aa-0.05□□□□□ -2.42
snR38snR38 SNP1Q00916 300 aaPredicted RBP-0.05□□□□□ -2.42
snR38snR38 UTP21Q06078 939 aaPredicted RBP-0.05□□□□□ -2.42
snR38snR38 TDA5Q06417 326 aaKnown RBP-0.05□□□□□ -2.42
snR38snR38 IES4Q08561 116 aa-0.05□□□□□ -2.42
snR38snR38 PRM7Q12459 698 aa-0.05□□□□□ -2.42
snR38snR38 RLF2Q12495 606 aa-0.05□□□□□ -2.42
snR38snR38 RRP12Q12754 1228 aaKnown RBP-0.05□□□□□ -2.42
snR38snR38 YBL111CQ3E7Y5 667 aa-0.05□□□□□ -2.42
snR38snR38 CIT1P00890 479 aa-0.06□□□□□ -2.42
snR38snR38 PRE4P30657 266 aa-0.06□□□□□ -2.42
snR38snR38 DEG1P31115 442 aaKnown RBP-0.06□□□□□ -2.42
snR38snR38 PAD1P33751 242 aaKnown RBP RIP-Chip data-0.06□□□□□ -2.42not detected
snR38snR38 MIC60P36112 540 aa-0.06□□□□□ -2.42
snR38snR38 MAL31P38156 614 aa-0.06□□□□□ -2.42
snR38snR38 TIF5P38431 405 aaKnown RBP-0.06□□□□□ -2.42
snR38snR38 YGP1P38616 354 aaKnown RBP-0.06□□□□□ -2.42
snR38snR38 VPS41P38959 992 aa-0.06□□□□□ -2.42
snR38snR38 BEM4P39011 633 aa-0.06□□□□□ -2.42
snR38snR38 SPF1P39986 1215 aaKnown RBP-0.06□□□□□ -2.42
snR38snR38 IDP2P41939 412 aa-0.06□□□□□ -2.42
snR38snR38 YGR210CP42942 411 aa-0.06□□□□□ -2.42
snR38snR38 YJR120WP47157 116 aa-0.06□□□□□ -2.42
Retrieved 100 of 5,963 RNA–protein pairs in 10.9 ms