RNA–Protein interactions for RNA: YPL193W

RSA1, Transcript of Protein involved in the assembly of 60S ribosomal subunits, yeast

Gene RSA1, Length 1,146 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RSA1	YPL193W	OCA5	P38738	679 aa		3.67	□□□□□ -1.82
RSA1	YPL193W	YJL193W	P39542	402 aa		3.67	□□□□□ -1.82
RSA1	YPL193W	YEL076C	P39971	216 aa		3.67	□□□□□ -1.82
RSA1	YPL193W	VID28	P40547	921 aa		3.67	□□□□□ -1.82
RSA1	YPL193W	YHM2	Q04013	314 aa		3.67	□□□□□ -1.82
RSA1	YPL193W	TRM3	Q07527	1436 aa		3.67	□□□□□ -1.82
RSA1	YPL193W	MLP2	P40457	1679 aa		3.66	□□□□□ -1.82
RSA1	YPL193W	AAC1	P04710	309 aa		3.66	□□□□□ -1.82
RSA1	YPL193W	HMG2	P12684	1045 aa		3.66	□□□□□ -1.82
RSA1	YPL193W	RPT3	P33298	428 aa	Known RBP	3.66	□□□□□ -1.82
RSA1	YPL193W	FAT1	P38225	669 aa		3.66	□□□□□ -1.82
RSA1	YPL193W	MDV1	P47025	714 aa		3.66	□□□□□ -1.82
RSA1	YPL193W	ORC1	P54784	914 aa	Predicted RBP	3.66	□□□□□ -1.82
RSA1	YPL193W	SNU56	Q03782	492 aa	Known RBP	3.66	□□□□□ -1.82
RSA1	YPL193W	PNO1	Q99216	274 aa	Known RBP	3.66	□□□□□ -1.82
RSA1	YPL193W	PCK1	P10963	549 aa		3.65	□□□□□ -1.83
RSA1	YPL193W	VPS33	P20795	691 aa		3.65	□□□□□ -1.83
RSA1	YPL193W	GND1	P38720	489 aa	Known RBP	3.65	□□□□□ -1.83
RSA1	YPL193W	HXT6	P39003	570 aa	Known RBP	3.65	□□□□□ -1.83
RSA1	YPL193W	HXT7	P39004	570 aa		3.65	□□□□□ -1.83
RSA1	YPL193W	YOR111W	Q99210	232 aa		3.65	□□□□□ -1.83
RSA1	YPL193W	NUP157	P40064	1391 aa	Known RBP	3.64	□□□□□ -1.83
RSA1	YPL193W	YTA7	P40340	1379 aa		3.64	□□□□□ -1.83
RSA1	YPL193W	BUD3	P25558	1636 aa		3.64	□□□□□ -1.83
RSA1	YPL193W	CDC26	P14724	124 aa		3.64	□□□□□ -1.83
RSA1	YPL193W	ACO1	P19414	778 aa	Known RBP RIP-Chip data	3.64	□□□□□ -1.83	not detected
RSA1	YPL193W	BET2	P20133	325 aa		3.64	□□□□□ -1.83
RSA1	YPL193W	IMD2	P38697	523 aa	Known RBP	3.64	□□□□□ -1.83
RSA1	YPL193W	IMD3	P50095	523 aa	Known RBP	3.64	□□□□□ -1.83
RSA1	YPL193W	ECM9	Q02202	377 aa		3.64	□□□□□ -1.83
RSA1	YPL193W	YPT1	P01123	206 aa	Known RBP	3.63	□□□□□ -1.83
RSA1	YPL193W	AIM17	P23180	465 aa	Known RBP	3.63	□□□□□ -1.83
RSA1	YPL193W	SFP1	P32432	683 aa		3.63	□□□□□ -1.83
RSA1	YPL193W	RMA1	P36001	430 aa	Known RBP	3.63	□□□□□ -1.83
RSA1	YPL193W	OAF3	P36023	863 aa		3.63	□□□□□ -1.83
RSA1	YPL193W	SCO2	P38072	301 aa		3.63	□□□□□ -1.83
RSA1	YPL193W	MTG2	P38860	518 aa		3.63	□□□□□ -1.83
RSA1	YPL193W	OSW7	P43611	510 aa		3.63	□□□□□ -1.83
RSA1	YPL193W	BOP3	P53958	396 aa		3.63	□□□□□ -1.83
RSA1	YPL193W	RAD33	Q04231	177 aa		3.63	□□□□□ -1.83
RSA1	YPL193W	YTH1	Q06102	208 aa	Predicted RBP	3.63	□□□□□ -1.83
RSA1	YPL193W	GAL4	P04386	881 aa		3.62	□□□□□ -1.83
RSA1	YPL193W	RPS21A	P0C0V8	87 aa	Known RBP	3.62	□□□□□ -1.83
RSA1	YPL193W	GDA1	P32621	518 aa		3.62	□□□□□ -1.83
RSA1	YPL193W	ENP2	P48234	707 aa	Known RBP	3.62	□□□□□ -1.83
RSA1	YPL193W	SQS1	P53866	767 aa	Known RBP	3.62	□□□□□ -1.83
RSA1	YPL193W	SCW10	Q04951	389 aa		3.62	□□□□□ -1.83
RSA1	YPL193W	RPL8A	P17076	256 aa	Known RBP	3.61	□□□□□ -1.83
RSA1	YPL193W	YCR043C	P25361	127 aa		3.61	□□□□□ -1.83
RSA1	YPL193W	DGR2	P32330	852 aa		3.61	□□□□□ -1.83
RSA1	YPL193W	MF(ALPHA)2	P32435	120 aa		3.61	□□□□□ -1.83
RSA1	YPL193W	DSS4	P32601	143 aa		3.61	□□□□□ -1.83
RSA1	YPL193W	FTH1	P38310	465 aa		3.61	□□□□□ -1.83
RSA1	YPL193W	CRT10	Q08226	957 aa		3.61	□□□□□ -1.83
RSA1	YPL193W	NRT1	Q08485	598 aa		3.61	□□□□□ -1.83
RSA1	YPL193W	YOR389W	Q08912	624 aa		3.61	□□□□□ -1.83
RSA1	YPL193W	SEC7	P11075	2009 aa	Known RBP	3.61	□□□□□ -1.83
RSA1	YPL193W	STH1	P32597	1359 aa		3.61	□□□□□ -1.83
RSA1	YPL193W	MNN1	P39106	762 aa		3.6	□□□□□ -1.83
RSA1	YPL193W	YGL260W	P53056	76 aa		3.6	□□□□□ -1.83
RSA1	YPL193W	YNL092W	P53934	400 aa		3.6	□□□□□ -1.83
RSA1	YPL193W	MAK10	Q02197	733 aa		3.6	□□□□□ -1.83
RSA1	YPL193W	HFI1	Q12060	488 aa		3.6	□□□□□ -1.83
RSA1	YPL193W	YSP2	Q06681	1438 aa		3.6	□□□□□ -1.83
RSA1	YPL193W	TYS1	P36421	394 aa	Known RBP	3.59	□□□□□ -1.83
RSA1	YPL193W	YAP3	P38749	330 aa		3.59	□□□□□ -1.83
RSA1	YPL193W	CIN1	P40987	1014 aa		3.59	□□□□□ -1.83
RSA1	YPL193W	PTA1	Q01329	785 aa	Predicted RBP	3.59	□□□□□ -1.83
RSA1	YPL193W	ATX2	Q12067	313 aa		3.59	□□□□□ -1.83
RSA1	YPL193W	UBX3	Q12229	455 aa		3.59	□□□□□ -1.83
RSA1	YPL193W	TY3B-G	Q99315	1547 aa		3.59	□□□□□ -1.84
RSA1	YPL193W	CET1	O13297	549 aa	Predicted RBP	3.58	□□□□□ -1.84
RSA1	YPL193W	TUF1	P02992	437 aa	Known RBP	3.58	□□□□□ -1.84
RSA1	YPL193W	ILS1	P09436	1072 aa	Known RBP	3.58	□□□□□ -1.84
RSA1	YPL193W	SEC12	P11655	471 aa		3.58	□□□□□ -1.84
RSA1	YPL193W	CDC5	P32562	705 aa		3.58	□□□□□ -1.84
RSA1	YPL193W	YMR034C	Q05131	434 aa	Predicted RBP	3.58	□□□□□ -1.84
RSA1	YPL193W	DSE3	Q08729	430 aa		3.58	□□□□□ -1.84
RSA1	YPL193W	PFA4	Q12006	378 aa		3.58	□□□□□ -1.84
RSA1	YPL193W	NOP14	Q99207	810 aa	Known RBP	3.58	□□□□□ -1.84
RSA1	YPL193W	RTC1	Q08281	1341 aa		3.58	□□□□□ -1.84
RSA1	YPL193W	MAK32	P23060	363 aa		3.57	□□□□□ -1.84
RSA1	YPL193W	YIL152W	P40455	235 aa		3.57	□□□□□ -1.84
RSA1	YPL193W	TES1	P41903	349 aa	Known RBP	3.57	□□□□□ -1.84
RSA1	YPL193W	YML119W	Q03208	357 aa		3.57	□□□□□ -1.84
RSA1	YPL193W	GRS2	Q06817	618 aa		3.57	□□□□□ -1.84
RSA1	YPL193W	PHO2	P07269	559 aa		3.56	□□□□□ -1.84
RSA1	YPL193W	ARC40	P38328	384 aa	Known RBP	3.56	□□□□□ -1.84
RSA1	YPL193W	GZF3	P42944	551 aa	Known RBP	3.56	□□□□□ -1.84
RSA1	YPL193W	HLJ1	P48353	224 aa		3.56	□□□□□ -1.84
RSA1	YPL193W	YNL058C	P53947	316 aa		3.56	□□□□□ -1.84
RSA1	YPL193W	MTQ2	Q03920	221 aa	Predicted RBP	3.56	□□□□□ -1.84
RSA1	YPL193W	RRP43	P25359	394 aa	Predicted RBP	3.55	□□□□□ -1.84
RSA1	YPL193W	HXT4	P32467	576 aa		3.55	□□□□□ -1.84
RSA1	YPL193W	MET30	P39014	640 aa		3.55	□□□□□ -1.84
RSA1	YPL193W	CIR1	P42940	261 aa		3.55	□□□□□ -1.84
RSA1	YPL193W	COG2	P53271	262 aa		3.55	□□□□□ -1.84
RSA1	YPL193W	AAT1	Q01802	451 aa		3.55	□□□□□ -1.84
RSA1	YPL193W	MTD1	Q02046	320 aa	Known RBP	3.55	□□□□□ -1.84
RSA1	YPL193W	UBP16	Q02863	499 aa		3.55	□□□□□ -1.84

Retrieved 100 of 5,963 RNA–protein pairs in 40.3 ms