RNA–Protein interactions for RNA: YOR142W

LSC1, Transcript of Alpha subunit of succinyl-CoA ligase, yeastyeast

Gene LSC1, Length 990 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSC1YOR142W SML1Q04964 104 aa6.83□□□□□ -1.32
LSC1YOR142W YML053CQ04978 212 aa6.83□□□□□ -1.32
LSC1YOR142W SWC7Q06707 132 aa6.83□□□□□ -1.32
LSC1YOR142W CBC2Q08920 208 aaKnown RBP RIP-Chip data6.83□□□□□ -1.32not detected
LSC1YOR142W EFG1Q3E705 233 aaKnown RBP6.83□□□□□ -1.32
LSC1YOR142W COX5AP00424 153 aa6.82□□□□□ -1.32
LSC1YOR142W MIS1P09440 975 aaKnown RBP6.82□□□□□ -1.32
LSC1YOR142W DAL81P21657 970 aa6.82□□□□□ -1.32
LSC1YOR142W GUT1P32190 709 aa6.82□□□□□ -1.32
LSC1YOR142W ADD66P36040 267 aa6.82□□□□□ -1.32
LSC1YOR142W TCD2P36101 447 aaKnown RBP6.82□□□□□ -1.32
LSC1YOR142W MRPL40P36534 297 aa6.82□□□□□ -1.32
LSC1YOR142W APM3P38153 483 aa6.82□□□□□ -1.32
LSC1YOR142W FUI1P38196 639 aa6.82□□□□□ -1.32
LSC1YOR142W SRP68P38687 599 aaKnown RBP6.82□□□□□ -1.32
LSC1YOR142W GDH3P39708 457 aa6.82□□□□□ -1.32
LSC1YOR142W AIM23P47015 356 aa6.82□□□□□ -1.32
LSC1YOR142W TCB2P48231 1178 aa6.82□□□□□ -1.32
LSC1YOR142W NPY1P53164 384 aa6.82□□□□□ -1.32
LSC1YOR142W PEX13P80667 386 aa6.82□□□□□ -1.32
LSC1YOR142W LCB5Q06147 687 aaKnown RBP6.82□□□□□ -1.32
LSC1YOR142W MCM16Q12262 181 aa6.82□□□□□ -1.32
LSC1YOR142W PEX11Q12462 236 aa6.82□□□□□ -1.32
LSC1YOR142W HTA1P04911 132 aaKnown RBP6.81□□□□□ -1.32
LSC1YOR142W HTA2P04912 132 aa6.81□□□□□ -1.32
LSC1YOR142W MRPL8P22353 238 aa6.81□□□□□ -1.32
LSC1YOR142W AAT2P23542 418 aaKnown RBP6.81□□□□□ -1.32
LSC1YOR142W PUF4P25339 888 aaKnown RBP RIP-Chip data6.81□□□□□ -1.32not detected
LSC1YOR142W PYC2P32327 1180 aaKnown RBP6.81□□□□□ -1.32
LSC1YOR142W OTU2P38747 307 aaKnown RBP6.81□□□□□ -1.32
LSC1YOR142W SMF1P38925 575 aa6.81□□□□□ -1.32
LSC1YOR142W SER33P40510 469 aa6.81□□□□□ -1.32
LSC1YOR142W RRN7P40992 514 aa6.81□□□□□ -1.32
LSC1YOR142W YJL132WP47014 750 aa6.81□□□□□ -1.32
LSC1YOR142W EMC4P53073 190 aa6.81□□□□□ -1.32
LSC1YOR142W AIM14P53109 570 aa6.81□□□□□ -1.32
LSC1YOR142W TIM13P53299 105 aa6.81□□□□□ -1.32
LSC1YOR142W GND2P53319 492 aa6.81□□□□□ -1.32
LSC1YOR142W RPL34AP87262 121 aaPredicted RBP6.81□□□□□ -1.32
LSC1YOR142W TDA9Q04545 1251 aa6.81□□□□□ -1.32
LSC1YOR142W POB3Q04636 552 aaKnown RBP6.81□□□□□ -1.32
LSC1YOR142W CLP1Q08685 445 aaPredicted RBP6.81□□□□□ -1.32
LSC1YOR142W FAP7Q12055 197 aaPredicted RBP6.81□□□□□ -1.32
LSC1YOR142W SEY1Q99287 776 aa6.81□□□□□ -1.32
LSC1YOR142W PYC1P11154 1178 aaKnown RBP6.8□□□□□ -1.32
LSC1YOR142W GCD6P32501 712 aaKnown RBP6.8□□□□□ -1.32
LSC1YOR142W MRS6P32864 603 aaKnown RBP6.8□□□□□ -1.32
LSC1YOR142W ALY1P36117 915 aa6.8□□□□□ -1.32
LSC1YOR142W GIP1P38229 639 aa6.8□□□□□ -1.32
LSC1YOR142W DIA4P38705 446 aaPredicted RBP6.8□□□□□ -1.32
LSC1YOR142W GIP4P39732 760 aa6.8□□□□□ -1.32
LSC1YOR142W REF2P42073 533 aaPredicted RBP6.8□□□□□ -1.32
LSC1YOR142W CWC22P53333 577 aaKnown RBP6.8□□□□□ -1.32
LSC1YOR142W PRM1P53835 661 aa6.8□□□□□ -1.32
LSC1YOR142W SMA1Q02651 245 aa6.8□□□□□ -1.32
LSC1YOR142W YMR187CQ03236 431 aa6.8□□□□□ -1.32
LSC1YOR142W MSH6Q03834 1242 aa6.8□□□□□ -1.32
LSC1YOR142W MFB1Q04922 465 aa6.8□□□□□ -1.32
LSC1YOR142W ARP9Q05123 467 aa6.8□□□□□ -1.32
LSC1YOR142W HEL2Q05580 639 aaKnown RBP6.8□□□□□ -1.32
LSC1YOR142W AIM41Q12032 185 aa6.8□□□□□ -1.32
LSC1YOR142W AI5_ALPHAQ9ZZX1 630 aa6.8□□□□□ -1.32
LSC1YOR142W MIH1P23748 554 aa6.79□□□□□ -1.32
LSC1YOR142W UTR2P32623 467 aa6.79□□□□□ -1.32
LSC1YOR142W RAD5P32849 1169 aaPredicted RBP6.79□□□□□ -1.32
LSC1YOR142W PXA2P34230 853 aa6.79□□□□□ -1.32
LSC1YOR142W MSG5P38590 489 aa6.79□□□□□ -1.32
LSC1YOR142W MMS21P38632 267 aa6.79□□□□□ -1.32
LSC1YOR142W PPX1P38698 397 aa6.79□□□□□ -1.32
LSC1YOR142W YAT2P40017 923 aa6.79□□□□□ -1.32
LSC1YOR142W YMR134WP40207 237 aa6.79□□□□□ -1.32
LSC1YOR142W PAN6P40459 309 aa6.79□□□□□ -1.32
LSC1YOR142W MND2P40577 368 aa6.79□□□□□ -1.32
LSC1YOR142W REG1Q00816 1014 aa6.79□□□□□ -1.32
LSC1YOR142W MTG1Q03151 367 aaPredicted RBP6.79□□□□□ -1.32
LSC1YOR142W URH1Q04179 340 aa6.79□□□□□ -1.32
LSC1YOR142W RPC11Q04307 110 aaPredicted RBP6.79□□□□□ -1.32
LSC1YOR142W HPF1Q05164 967 aa6.79□□□□□ -1.32
LSC1YOR142W ECI1Q05871 280 aa6.79□□□□□ -1.32
LSC1YOR142W YLL056CQ12177 298 aa6.79□□□□□ -1.32
LSC1YOR142W RAD3P06839 778 aa6.78□□□□□ -1.32
LSC1YOR142W LEU1P07264 779 aaKnown RBP6.78□□□□□ -1.32
LSC1YOR142W SST2P11972 698 aaKnown RBP6.78□□□□□ -1.32
LSC1YOR142W RML2P32611 393 aa6.78□□□□□ -1.32
LSC1YOR142W TYE7P33122 291 aaPredicted RBP6.78□□□□□ -1.32
LSC1YOR142W PBP2P38151 413 aaKnown RBP RIP-Chip data6.78□□□□□ -1.32not detected
LSC1YOR142W YBP1P38315 674 aa6.78□□□□□ -1.32
LSC1YOR142W WSC4P38739 605 aa6.78□□□□□ -1.32
LSC1YOR142W PIK1P39104 1066 aa6.78□□□□□ -1.32
LSC1YOR142W ELO3P40319 345 aa6.78□□□□□ -1.32
LSC1YOR142W ROK1P45818 564 aaPredicted RBP6.78□□□□□ -1.32
LSC1YOR142W RPC17P47076 161 aa6.78□□□□□ -1.32
LSC1YOR142W AQR1P53943 586 aa6.78□□□□□ -1.32
LSC1YOR142W VAC7P53950 1165 aa6.78□□□□□ -1.32
LSC1YOR142W YNL035CP53962 389 aaKnown RBP6.78□□□□□ -1.32
LSC1YOR142W ENT5Q03769 411 aaKnown RBP6.78□□□□□ -1.32
LSC1YOR142W YMR160WQ03823 816 aa6.78□□□□□ -1.32
LSC1YOR142W CMS1Q07897 291 aaKnown RBP6.78□□□□□ -1.32
LSC1YOR142W NRT1Q08485 598 aa6.78□□□□□ -1.32
LSC1YOR142W PGC1Q08959 321 aa6.78□□□□□ -1.32
Retrieved 100 of 5,963 RNA–protein pairs in 122.4 ms