RNA–Protein interactions for RNA: YNL287W

SEC21, Transcript of Gamma subunit of coatomer, yeastyeast

Gene SEC21, Length 2,808 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC21YNL287W TRF5P48561 642 aaKnown RBP1.46□□□□□ -2.18
SEC21YNL287W SAP4P53036 818 aa1.46□□□□□ -2.18
SEC21YNL287W MAL11P53048 616 aa1.46□□□□□ -2.18
SEC21YNL287W TAD1P53065 400 aa1.46□□□□□ -2.18
SEC21YNL287W PCL10P53124 433 aa1.46□□□□□ -2.18
SEC21YNL287W RPN14P53196 417 aa1.46□□□□□ -2.18
SEC21YNL287W DAM1P53267 343 aa1.46□□□□□ -2.18
SEC21YNL287W NAN1Q02931 896 aaKnown RBP1.46□□□□□ -2.18
SEC21YNL287W RRN5Q02983 363 aa1.46□□□□□ -2.18
SEC21YNL287W UME1Q03010 460 aa1.46□□□□□ -2.18
SEC21YNL287W ATP25Q03153 612 aa1.46□□□□□ -2.18
SEC21YNL287W TDA9Q04545 1251 aa1.46□□□□□ -2.18
SEC21YNL287W OPY2Q06810 360 aa1.46□□□□□ -2.18
SEC21YNL287W NOP6Q07623 225 aaKnown RBP1.46□□□□□ -2.18
SEC21YNL287W MLH2Q07980 695 aa1.46□□□□□ -2.18
SEC21YNL287W LTE1P07866 1435 aa1.46□□□□□ -2.18
SEC21YNL287W RPN13O13563 156 aa1.46□□□□□ -2.18
SEC21YNL287W PHR1P05066 565 aaKnown RBP RIP-Chip data1.46□□□□□ -2.18not detected
SEC21YNL287W MET8P15807 274 aa1.46□□□□□ -2.18
SEC21YNL287W DBP3P20447 523 aaKnown RBP1.46□□□□□ -2.18
SEC21YNL287W DAL7P21826 554 aa1.46□□□□□ -2.18
SEC21YNL287W SEC15P22224 910 aa1.46□□□□□ -2.18
SEC21YNL287W SAN1P22470 610 aa1.46□□□□□ -2.18
SEC21YNL287W RRP43P25359 394 aaPredicted RBP1.46□□□□□ -2.18
SEC21YNL287W MSH1P25846 959 aa1.46□□□□□ -2.18
SEC21YNL287W PSO2P30620 661 aa1.46□□□□□ -2.18
SEC21YNL287W SRB4P32569 687 aa1.46□□□□□ -2.18
SEC21YNL287W NPL6P32832 435 aa1.46□□□□□ -2.18
SEC21YNL287W SET3P36124 751 aa1.46□□□□□ -2.18
SEC21YNL287W YBR284WP38150 797 aa1.46□□□□□ -2.18
SEC21YNL287W YSW1P38280 609 aa1.46□□□□□ -2.18
SEC21YNL287W SLX1P38324 304 aa1.46□□□□□ -2.18
SEC21YNL287W TIF5P38431 405 aaKnown RBP1.46□□□□□ -2.18
SEC21YNL287W MSR1P38714 643 aa1.46□□□□□ -2.18
SEC21YNL287W RIM4P38741 713 aa1.46□□□□□ -2.18
SEC21YNL287W PIH1P38768 344 aa1.46□□□□□ -2.18
SEC21YNL287W HRB1P38922 454 aaKnown RBP RIP-Chip data1.46□□□□□ -2.18not detected
SEC21YNL287W TMN3P40071 706 aa1.46□□□□□ -2.18
SEC21YNL287W YIL161WP40449 235 aaKnown RBP1.46□□□□□ -2.18
SEC21YNL287W NAS2P40555 220 aa1.46□□□□□ -2.18
SEC21YNL287W ALR2P43553 858 aa1.46□□□□□ -2.18
SEC21YNL287W CWC24P53769 259 aa1.46□□□□□ -2.18
SEC21YNL287W YNL144CP53907 740 aa1.46□□□□□ -2.18
SEC21YNL287W PRO2P54885 456 aaKnown RBP1.46□□□□□ -2.18
SEC21YNL287W TFB2Q02939 513 aa1.46□□□□□ -2.18
SEC21YNL287W YMR018WQ04364 514 aa1.46□□□□□ -2.18
SEC21YNL287W RRN11Q04712 507 aa1.46□□□□□ -2.18
SEC21YNL287W EIS1Q05050 843 aaKnown RBP1.46□□□□□ -2.18
SEC21YNL287W CIA1Q05583 330 aa1.46□□□□□ -2.18
SEC21YNL287W NNT1Q05874 261 aa1.46□□□□□ -2.18
SEC21YNL287W YLR287CQ05881 355 aa1.46□□□□□ -2.18
SEC21YNL287W RGC1Q06108 1083 aaKnown RBP1.46□□□□□ -2.18
SEC21YNL287W TDA5Q06417 326 aaKnown RBP1.46□□□□□ -2.18
SEC21YNL287W THI73Q07904 523 aa1.46□□□□□ -2.18
SEC21YNL287W OSW1Q08692 278 aa1.46□□□□□ -2.18
SEC21YNL287W RRG1Q12167 365 aaPredicted RBP1.46□□□□□ -2.18
SEC21YNL287W BUG1Q12191 341 aa1.46□□□□□ -2.18
SEC21YNL287W HSH49Q99181 213 aaPredicted RBP1.46□□□□□ -2.18
SEC21YNL287W THO2P53552 1597 aaKnown RBP1.45□□□□□ -2.18
SEC21YNL287W CAN1P04817 590 aa1.45□□□□□ -2.18
SEC21YNL287W PET494P07390 489 aaPredicted RBP1.45□□□□□ -2.18
SEC21YNL287W MSS18P08593 268 aa1.45□□□□□ -2.18
SEC21YNL287W MIS1P09440 975 aaKnown RBP1.45□□□□□ -2.18
SEC21YNL287W MRP7P12687 371 aa1.45□□□□□ -2.18
SEC21YNL287W PRP28P23394 588 aa1.45□□□□□ -2.18
SEC21YNL287W KCC4P25389 1037 aa1.45□□□□□ -2.18
SEC21YNL287W YUR1P26725 428 aa1.45□□□□□ -2.18
SEC21YNL287W POT1P27796 417 aaKnown RBP RIP-Chip data1.45□□□□□ -2.18not detected
SEC21YNL287W YJU2P28320 278 aaPredicted RBP1.45□□□□□ -2.18
SEC21YNL287W BEM3P32873 1128 aa1.45□□□□□ -2.18
SEC21YNL287W YKL133CP36066 463 aa1.45□□□□□ -2.18
SEC21YNL287W UIP5P36137 443 aa1.45□□□□□ -2.18
SEC21YNL287W FTH1P38310 465 aa1.45□□□□□ -2.18
SEC21YNL287W SRP72P38688 640 aaKnown RBP1.45□□□□□ -2.18
SEC21YNL287W AIM10P39965 576 aaKnown RBP1.45□□□□□ -2.18
SEC21YNL287W BUD16P39988 312 aa1.45□□□□□ -2.18
SEC21YNL287W ERR3P42222 437 aa1.45□□□□□ -2.18
SEC21YNL287W ZIM17P42844 174 aa1.45□□□□□ -2.18
SEC21YNL287W FYV8P46949 817 aaKnown RBP1.45□□□□□ -2.18
SEC21YNL287W MAD3P47074 515 aa1.45□□□□□ -2.18
SEC21YNL287W HLJ1P48353 224 aa1.45□□□□□ -2.18
SEC21YNL287W LYS4P49367 693 aaPredicted RBP1.45□□□□□ -2.18
SEC21YNL287W ZIP2P53061 704 aa1.45□□□□□ -2.18
SEC21YNL287W MDR1P53258 950 aa1.45□□□□□ -2.18
SEC21YNL287W TIM10P87108 93 aa1.45□□□□□ -2.18
SEC21YNL287W SNP1Q00916 300 aaPredicted RBP1.45□□□□□ -2.18
SEC21YNL287W MUB1Q03162 620 aa1.45□□□□□ -2.18
SEC21YNL287W RBA50Q04418 439 aa1.45□□□□□ -2.18
SEC21YNL287W DPB4Q04603 196 aaKnown RBP1.45□□□□□ -2.18
SEC21YNL287W MLC2Q06580 163 aa1.45□□□□□ -2.18
SEC21YNL287W YLR001CQ07895 862 aa1.45□□□□□ -2.18
SEC21YNL287W BRX1Q08235 291 aaKnown RBP1.45□□□□□ -2.18
SEC21YNL287W KEL3Q08979 651 aaPredicted RBP1.45□□□□□ -2.18
SEC21YNL287W ENT1Q12518 454 aa1.45□□□□□ -2.18
SEC21YNL287W YKL033W-AQ86ZR7 236 aa1.45□□□□□ -2.18
SEC21YNL287W PDR15Q04182 1529 aaKnown RBP1.45□□□□□ -2.18
SEC21YNL287W NUP145P49687 1317 aa1.45□□□□□ -2.18
SEC21YNL287W STE3P06783 470 aa1.45□□□□□ -2.18
SEC21YNL287W SEN2P16658 377 aa1.45□□□□□ -2.18
SEC21YNL287W AAC3P18238 307 aa1.45□□□□□ -2.18
Retrieved 100 of 5,963 RNA–protein pairs in 54.9 ms