RNA–Protein interactions for RNA: YMR153W

NUP53, Transcript of FG-nucleoporin component of central core of nuclear pore complex (NPC), yeastyeast

Gene NUP53, Length 1,428 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP53YMR153W FLC2P39719 783 aa7.82□□□□□ -1.16
NUP53YMR153W SAW1P39735 261 aa7.82□□□□□ -1.16
NUP53YMR153W TIF34P40217 347 aaKnown RBP7.82□□□□□ -1.16
NUP53YMR153W ATM1P40416 690 aa7.82□□□□□ -1.16
NUP53YMR153W RRN7P40992 514 aa7.82□□□□□ -1.16
NUP53YMR153W RFX1P48743 811 aa7.82□□□□□ -1.16
NUP53YMR153W MNN10P50108 393 aaKnown RBP7.82□□□□□ -1.16
NUP53YMR153W YMR187CQ03236 431 aa7.82□□□□□ -1.16
NUP53YMR153W THI7Q05998 598 aa7.82□□□□□ -1.16
NUP53YMR153W SFI1Q12369 946 aa7.82□□□□□ -1.16
NUP53YMR153W SLY1P22213 666 aa7.81□□□□□ -1.16
NUP53YMR153W YCR015CP25616 317 aa7.81□□□□□ -1.16
NUP53YMR153W PAT1P25644 796 aaKnown RBP7.81□□□□□ -1.16
NUP53YMR153W EBP2P36049 427 aaKnown RBP7.81□□□□□ -1.16
NUP53YMR153W TCD1P38756 429 aa7.81□□□□□ -1.16
NUP53YMR153W RAD26P40352 1085 aa7.81□□□□□ -1.16
NUP53YMR153W PAN6P40459 309 aa7.81□□□□□ -1.16
NUP53YMR153W MVP1P40959 511 aaKnown RBP7.81□□□□□ -1.16
NUP53YMR153W ROK1P45818 564 aaPredicted RBP7.81□□□□□ -1.16
NUP53YMR153W YML6P51998 286 aa7.81□□□□□ -1.16
NUP53YMR153W MNT2P53059 558 aa7.81□□□□□ -1.16
NUP53YMR153W TIM13P53299 105 aa7.81□□□□□ -1.16
NUP53YMR153W ORC3P54790 616 aa7.81□□□□□ -1.16
NUP53YMR153W REG1Q00816 1014 aa7.81□□□□□ -1.16
NUP53YMR153W NGL3Q03210 505 aa7.81□□□□□ -1.16
NUP53YMR153W RPC11Q04307 110 aaPredicted RBP7.81□□□□□ -1.16
NUP53YMR153W YPR114WQ06107 315 aa7.81□□□□□ -1.16
NUP53YMR153W PGC1Q08959 321 aa7.81□□□□□ -1.16
NUP53YMR153W YLR462WO13556 202 aa7.8□□□□□ -1.16
NUP53YMR153W LEU1P07264 779 aaKnown RBP7.8□□□□□ -1.16
NUP53YMR153W CHL1P22516 861 aaPredicted RBP7.8□□□□□ -1.16
NUP53YMR153W DCW1P36091 449 aa7.8□□□□□ -1.16
NUP53YMR153W TGL4P36165 910 aa7.8□□□□□ -1.16
NUP53YMR153W PCA1P38360 1216 aa7.8□□□□□ -1.16
NUP53YMR153W YHL049CP38722 271 aa7.8□□□□□ -1.16
NUP53YMR153W FAA3P39002 694 aa7.8□□□□□ -1.16
NUP53YMR153W YFL064CP43540 174 aa7.8□□□□□ -1.16
NUP53YMR153W YJR124CP47159 448 aa7.8□□□□□ -1.16
NUP53YMR153W ENT5Q03769 411 aaKnown RBP7.8□□□□□ -1.16
NUP53YMR153W AAD15Q08361 143 aa7.8□□□□□ -1.16
NUP53YMR153W CBC2Q08920 208 aaKnown RBP RIP-Chip data7.8□□□□□ -1.16not detected
NUP53YMR153W YBL111CQ3E7Y5 667 aa7.8□□□□□ -1.16
NUP53YMR153W IRA2P19158 3079 aa7.8□□□□□ -1.16
NUP53YMR153W SCH9P11792 824 aaKnown RBP7.79□□□□□ -1.16
NUP53YMR153W MNE1P24720 663 aa7.79□□□□□ -1.16
NUP53YMR153W HXT1P32465 570 aa7.79□□□□□ -1.16
NUP53YMR153W YHL041WP38730 149 aa7.79□□□□□ -1.16
NUP53YMR153W WSC4P38739 605 aa7.79□□□□□ -1.16
NUP53YMR153W SEC9P40357 651 aa7.79□□□□□ -1.16
NUP53YMR153W ARG2P40360 574 aa7.79□□□□□ -1.16
NUP53YMR153W MKT1P40850 830 aaKnown RBP7.79□□□□□ -1.16
NUP53YMR153W ALF1P53904 254 aa7.79□□□□□ -1.16
NUP53YMR153W VAC7P53950 1165 aa7.79□□□□□ -1.16
NUP53YMR153W YMR178WQ03219 274 aaKnown RBP7.79□□□□□ -1.16
NUP53YMR153W STB3Q12427 513 aa7.79□□□□□ -1.16
NUP53YMR153W OCA6Q12454 224 aa7.79□□□□□ -1.16
NUP53YMR153W COX3P00420 269 aa7.78□□□□□ -1.16
NUP53YMR153W TUB3P09734 445 aaKnown RBP7.78□□□□□ -1.16
NUP53YMR153W SPT15P13393 240 aaKnown RBP7.78□□□□□ -1.16
NUP53YMR153W PMA2P19657 947 aa7.78□□□□□ -1.16
NUP53YMR153W RBK1P25332 333 aa7.78□□□□□ -1.16
NUP53YMR153W PMI40P29952 429 aaKnown RBP7.78□□□□□ -1.16
NUP53YMR153W SLX5P32828 619 aaKnown RBP7.78□□□□□ -1.16
NUP53YMR153W TAE1P38340 232 aa7.78□□□□□ -1.16
NUP53YMR153W RCK2P38623 610 aa7.78□□□□□ -1.16
NUP53YMR153W PPE1P38796 400 aa7.78□□□□□ -1.16
NUP53YMR153W YPT35P38815 214 aaKnown RBP7.78□□□□□ -1.16
NUP53YMR153W PFS1P38872 237 aa7.78□□□□□ -1.16
NUP53YMR153W LCP5P40079 357 aaPredicted RBP7.78□□□□□ -1.16
NUP53YMR153W DSN1P40568 576 aa7.78□□□□□ -1.16
NUP53YMR153W ALY2P47029 1046 aa7.78□□□□□ -1.16
NUP53YMR153W YGL140CP53120 1219 aa7.78□□□□□ -1.16
NUP53YMR153W SNO2P53823 222 aa7.78□□□□□ -1.16
NUP53YMR153W MSH6Q03834 1242 aa7.78□□□□□ -1.16
NUP53YMR153W CMS1Q07897 291 aaKnown RBP7.78□□□□□ -1.16
NUP53YMR153W SAM4Q08985 325 aaKnown RBP7.78□□□□□ -1.16
NUP53YMR153W RTK1Q12100 620 aaPredicted RBP7.78□□□□□ -1.16
NUP53YMR153W YLL056CQ12177 298 aa7.78□□□□□ -1.16
NUP53YMR153W NAG1Q8TGN9 163 aa7.78□□□□□ -1.16
NUP53YMR153W Q0182Q9ZZW1 134 aa7.78□□□□□ -1.16
NUP53YMR153W COX5AP00424 153 aa7.78□□□□□ -1.16
NUP53YMR153W RAD10P06838 210 aa7.78□□□□□ -1.16
NUP53YMR153W POL30P15873 258 aaKnown RBP7.78□□□□□ -1.16
NUP53YMR153W SFL1P20134 766 aa7.78□□□□□ -1.16
NUP53YMR153W RAD5P32849 1169 aaPredicted RBP7.78□□□□□ -1.16
NUP53YMR153W MFT1P33441 392 aaKnown RBP7.78□□□□□ -1.16
NUP53YMR153W PMT1P33775 817 aa7.78□□□□□ -1.16
NUP53YMR153W STO1P34160 861 aaKnown RBP7.78□□□□□ -1.16
NUP53YMR153W DIA4P38705 446 aaPredicted RBP7.78□□□□□ -1.16
NUP53YMR153W EFM4P40516 257 aa7.78□□□□□ -1.16
NUP53YMR153W YPS6P40583 537 aa7.78□□□□□ -1.16
NUP53YMR153W GLG2P47011 380 aa7.78□□□□□ -1.16
NUP53YMR153W SPC105P53148 917 aa7.78□□□□□ -1.16
NUP53YMR153W BTN2P53286 410 aa7.78□□□□□ -1.16
NUP53YMR153W CTR9P89105 1077 aa7.78□□□□□ -1.16
NUP53YMR153W YMR114CQ04471 368 aaKnown RBP7.78□□□□□ -1.16
NUP53YMR153W OPT2Q06593 877 aa7.78□□□□□ -1.16
NUP53YMR153W TRE2Q08693 809 aa7.78□□□□□ -1.16
NUP53YMR153W YDR018CQ12185 396 aa7.78□□□□□ -1.16
NUP53YMR153W AAT2P23542 418 aaKnown RBP7.77□□□□□ -1.17
Retrieved 100 of 5,963 RNA–protein pairs in 120.5 ms