RNA–Protein interactions for RNA: YLR006C

SSK1, Transcript of Cytoplasmic phosphorelay intermediate osmosensor and regulator, yeastyeast

Gene SSK1, Length 2,139 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSK1YLR006C YPL277CQ08989 487 aa5.95□□□□□ -1.46
SSK1YLR006C STE3P06783 470 aa5.95□□□□□ -1.46
SSK1YLR006C BAS1P22035 811 aa5.95□□□□□ -1.46
SSK1YLR006C DBP1P24784 617 aaKnown RBP5.95□□□□□ -1.46
SSK1YLR006C GPI10P30777 616 aa5.95□□□□□ -1.46
SSK1YLR006C PUP2P32379 260 aa5.95□□□□□ -1.46
SSK1YLR006C PDB1P32473 366 aaKnown RBP5.95□□□□□ -1.46
SSK1YLR006C MGM101P32787 269 aaKnown RBP5.95□□□□□ -1.46
SSK1YLR006C MRP4P32902 394 aa5.95□□□□□ -1.46
SSK1YLR006C SEA4P38164 1038 aa5.95□□□□□ -1.46
SSK1YLR006C YEL023CP39992 682 aa5.95□□□□□ -1.46
SSK1YLR006C FET5P43561 622 aa5.95□□□□□ -1.46
SSK1YLR006C NUP85P46673 744 aa5.95□□□□□ -1.46
SSK1YLR006C FMS1P50264 508 aa5.95□□□□□ -1.46
SSK1YLR006C DIP5P53388 608 aa5.95□□□□□ -1.46
SSK1YLR006C CEG1Q01159 459 aaPredicted RBP5.95□□□□□ -1.46
SSK1YLR006C MUB1Q03162 620 aa5.95□□□□□ -1.46
SSK1YLR006C RRN11Q04712 507 aa5.95□□□□□ -1.46
SSK1YLR006C KAP95Q06142 861 aaKnown RBP5.95□□□□□ -1.46
SSK1YLR006C PSY3Q12318 242 aa5.95□□□□□ -1.46
SSK1YLR006C YOR019WQ99248 730 aa5.95□□□□□ -1.46
SSK1YLR006C BI4P03879 638 aa5.94□□□□□ -1.46
SSK1YLR006C HOM2P13663 365 aaKnown RBP5.94□□□□□ -1.46
SSK1YLR006C CHS2P14180 963 aa5.94□□□□□ -1.46
SSK1YLR006C HEM12P32347 362 aaPredicted RBP5.94□□□□□ -1.46
SSK1YLR006C CST26P38226 397 aa5.94□□□□□ -1.46
SSK1YLR006C MMS4P38257 691 aa5.94□□□□□ -1.46
SSK1YLR006C RRT2P38332 387 aa5.94□□□□□ -1.46
SSK1YLR006C PAN5P38787 379 aa5.94□□□□□ -1.46
SSK1YLR006C DUN1P39009 513 aa5.94□□□□□ -1.46
SSK1YLR006C YHB1P39676 399 aaKnown RBP5.94□□□□□ -1.46
SSK1YLR006C MNN11P46985 422 aaKnown RBP5.94□□□□□ -1.46
SSK1YLR006C YJR115WP47152 169 aa5.94□□□□□ -1.46
SSK1YLR006C YNL144CP53907 740 aa5.94□□□□□ -1.46
SSK1YLR006C UBP2Q01476 1272 aa5.94□□□□□ -1.46
SSK1YLR006C YDR278CQ05612 105 aa5.94□□□□□ -1.46
SSK1YLR006C EAF1Q06337 982 aa5.94□□□□□ -1.46
SSK1YLR006C BRX1Q08235 291 aaKnown RBP5.94□□□□□ -1.46
SSK1YLR006C GRX6Q12438 231 aa5.94□□□□□ -1.46
SSK1YLR006C SBP1P10080 294 aaKnown RBP5.93□□□□□ -1.46
SSK1YLR006C SRV2P17555 526 aaKnown RBP5.93□□□□□ -1.46
SSK1YLR006C YCR051WP25631 222 aa5.93□□□□□ -1.46
SSK1YLR006C MDJ1P35191 511 aa5.93□□□□□ -1.46
SSK1YLR006C HEK2P38199 381 aaKnown RBP RIP-Chip data5.93□□□□□ -1.46 RIP-Chip
SSK1YLR006C APM2P38700 605 aa5.93□□□□□ -1.46
SSK1YLR006C SAK1P38990 1142 aa5.93□□□□□ -1.46
SSK1YLR006C MET12P46151 657 aa5.93□□□□□ -1.46
SSK1YLR006C ILM1P47155 203 aa5.93□□□□□ -1.46
SSK1YLR006C ATH1P48016 1211 aa5.93□□□□□ -1.46
SSK1YLR006C YGR067CP53243 804 aa5.93□□□□□ -1.46
SSK1YLR006C GIM3P53900 129 aa5.93□□□□□ -1.46
SSK1YLR006C CDC55Q00362 526 aa5.93□□□□□ -1.46
SSK1YLR006C YPL109CQ02981 657 aa5.93□□□□□ -1.46
SSK1YLR006C YMR187CQ03236 431 aa5.93□□□□□ -1.46
SSK1YLR006C FUS2Q05670 677 aa5.93□□□□□ -1.46
SSK1YLR006C ARG80P07249 177 aa5.93□□□□□ -1.46
SSK1YLR006C ADH4P10127 382 aa5.93□□□□□ -1.46
SSK1YLR006C KRS1P15180 591 aaKnown RBP5.93□□□□□ -1.46
SSK1YLR006C AEP2P22136 580 aa5.93□□□□□ -1.46
SSK1YLR006C ADP1P25371 1049 aa5.93□□□□□ -1.46
SSK1YLR006C HMX1P32339 317 aa5.93□□□□□ -1.46
SSK1YLR006C AFG2P32794 780 aa5.93□□□□□ -1.46
SSK1YLR006C GYP6P32806 458 aa5.93□□□□□ -1.46
SSK1YLR006C EXO5P38289 585 aa5.93□□□□□ -1.46
SSK1YLR006C OAF1P39720 1047 aaPredicted RBP5.93□□□□□ -1.46
SSK1YLR006C KHA1P40309 873 aa5.93□□□□□ -1.46
SSK1YLR006C YJR061WP40355 935 aa5.93□□□□□ -1.46
SSK1YLR006C YMR1P47147 688 aaKnown RBP RIP-Chip data5.93□□□□□ -1.46not detected
SSK1YLR006C MET13P53128 600 aa5.93□□□□□ -1.46
SSK1YLR006C UTP8P53276 713 aaKnown RBP5.93□□□□□ -1.46
SSK1YLR006C SNF12P53628 566 aa5.93□□□□□ -1.46
SSK1YLR006C YNR061CP53747 219 aa5.93□□□□□ -1.46
SSK1YLR006C FAR8Q05040 523 aa5.93□□□□□ -1.46
SSK1YLR006C TAF10Q12030 206 aa5.93□□□□□ -1.46
SSK1YLR006C NCA2Q12374 616 aa5.93□□□□□ -1.46
SSK1YLR006C SKS1Q12505 502 aa5.93□□□□□ -1.46
SSK1YLR006C GCR1P07261 785 aa5.92□□□□□ -1.46
SSK1YLR006C CAR2P07991 424 aaKnown RBP5.92□□□□□ -1.46
SSK1YLR006C SRD1P09007 221 aa5.92□□□□□ -1.46
SSK1YLR006C SEC15P22224 910 aa5.92□□□□□ -1.46
SSK1YLR006C HIR2P32480 875 aa5.92□□□□□ -1.46
SSK1YLR006C RAD5P32849 1169 aaPredicted RBP5.92□□□□□ -1.46
SSK1YLR006C RAD54P32863 898 aa5.92□□□□□ -1.46
SSK1YLR006C SUR1P33300 382 aa5.92□□□□□ -1.46
SSK1YLR006C SLI15P38283 698 aa5.92□□□□□ -1.46
SSK1YLR006C YBR225WP38321 900 aa5.92□□□□□ -1.46
SSK1YLR006C KSP1P38691 1029 aaKnown RBP5.92□□□□□ -1.46
SSK1YLR006C XDJ1P39102 459 aa5.92□□□□□ -1.46
SSK1YLR006C GEM1P39722 662 aa5.92□□□□□ -1.46
SSK1YLR006C YEL068CP39977 110 aa5.92□□□□□ -1.46
SSK1YLR006C RPN3P40016 523 aaKnown RBP5.92□□□□□ -1.46
SSK1YLR006C RIO2P40160 425 aaKnown RBP5.92□□□□□ -1.46
SSK1YLR006C YIL077CP40508 320 aa5.92□□□□□ -1.46
SSK1YLR006C ZIP2P53061 704 aa5.92□□□□□ -1.46
SSK1YLR006C ERP6P53198 216 aa5.92□□□□□ -1.46
SSK1YLR006C VPS9P54787 451 aa5.92□□□□□ -1.46
SSK1YLR006C ORC4P54791 529 aa5.92□□□□□ -1.46
SSK1YLR006C TIM8P57744 87 aa5.92□□□□□ -1.46
SSK1YLR006C LCB5Q06147 687 aaKnown RBP5.92□□□□□ -1.46
SSK1YLR006C YLL032CQ07834 825 aaKnown RBP RIP-Chip data5.92□□□□□ -1.46not detected
Retrieved 100 of 5,963 RNA–protein pairs in 48.6 ms