RNA–Protein interactions for RNA: YJR044C

VPS55, Transcript of Late endosomal protein involved in late endosome to vacuole transport, yeastyeast

Gene VPS55, Length 423 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS55YJR044C MF(ALPHA)2P32435 120 aa1.82□□□□□ -2.12
VPS55YJR044C PRP19P32523 503 aaKnown RBP1.82□□□□□ -2.12
VPS55YJR044C SWE1P32944 819 aa1.82□□□□□ -2.12
VPS55YJR044C RMA1P36001 430 aaKnown RBP1.82□□□□□ -2.12
VPS55YJR044C SAD1P43589 448 aa1.82□□□□□ -2.12
VPS55YJR044C UME1Q03010 460 aa1.82□□□□□ -2.12
VPS55YJR044C YHM2Q04013 314 aa1.82□□□□□ -2.12
VPS55YJR044C THI73Q07904 523 aa1.82□□□□□ -2.12
VPS55YJR044C TRE2Q08693 809 aa1.82□□□□□ -2.12
VPS55YJR044C SLX4Q12098 748 aa1.82□□□□□ -2.12
VPS55YJR044C TMA17Q12513 150 aa1.82□□□□□ -2.12
VPS55YJR044C RTC1Q08281 1341 aa1.82□□□□□ -2.12
VPS55YJR044C RPL42AP0CX27 106 aaKnown RBP1.81□□□□□ -2.12
VPS55YJR044C RPL42BP0CX28 106 aaKnown RBP1.81□□□□□ -2.12
VPS55YJR044C PCK1P10963 549 aa1.81□□□□□ -2.12
VPS55YJR044C SEC18P18759 758 aaKnown RBP1.81□□□□□ -2.12
VPS55YJR044C VPS33P20795 691 aa1.81□□□□□ -2.12
VPS55YJR044C HXT4P32467 576 aa1.81□□□□□ -2.12
VPS55YJR044C SKP2P42843 763 aa1.81□□□□□ -2.12
VPS55YJR044C YPT11P48559 417 aa1.81□□□□□ -2.12
VPS55YJR044C PEX14P53112 341 aa1.81□□□□□ -2.12
VPS55YJR044C MTQ2Q03920 221 aaPredicted RBP1.81□□□□□ -2.12
VPS55YJR044C YOR389WQ08912 624 aa1.81□□□□□ -2.12
VPS55YJR044C APM4Q99186 491 aa1.81□□□□□ -2.12
VPS55YJR044C Q0010Q9ZZX9 128 aa1.81□□□□□ -2.12
VPS55YJR044C ILS1P09436 1072 aaKnown RBP1.8□□□□□ -2.12
VPS55YJR044C YFL068WP0CX99 160 aa1.8□□□□□ -2.12
VPS55YJR044C YLL066W-AP0CY00 160 aa1.8□□□□□ -2.12
VPS55YJR044C YLL067W-AP0CY01 160 aa1.8□□□□□ -2.12
VPS55YJR044C TRX2P22803 104 aaKnown RBP1.8□□□□□ -2.12
VPS55YJR044C PPZ1P26570 692 aa1.8□□□□□ -2.12
VPS55YJR044C MRS6P32864 603 aaKnown RBP1.8□□□□□ -2.12
VPS55YJR044C TYS1P36421 394 aaKnown RBP1.8□□□□□ -2.12
VPS55YJR044C PAF1P38351 445 aa1.8□□□□□ -2.12
VPS55YJR044C DHH1P39517 506 aaKnown RBP1.8□□□□□ -2.12
VPS55YJR044C YJL193WP39542 402 aa1.8□□□□□ -2.12
VPS55YJR044C ERP2P39704 215 aa1.8□□□□□ -2.12
VPS55YJR044C VRG4P40107 337 aa1.8□□□□□ -2.12
VPS55YJR044C YML119WQ03208 357 aa1.8□□□□□ -2.12
VPS55YJR044C ATG16Q03818 150 aa1.8□□□□□ -2.12
VPS55YJR044C SND1Q04007 877 aa1.8□□□□□ -2.12
VPS55YJR044C YDL121CQ07541 149 aa1.8□□□□□ -2.12
VPS55YJR044C GET3Q12154 354 aaKnown RBP1.8□□□□□ -2.12
VPS55YJR044C ATP12P22135 325 aa1.79□□□□□ -2.12
VPS55YJR044C RRP43P25359 394 aaPredicted RBP1.79□□□□□ -2.12
VPS55YJR044C PWP2P25635 923 aaKnown RBP1.79□□□□□ -2.12
VPS55YJR044C CDC5P32562 705 aa1.79□□□□□ -2.12
VPS55YJR044C DSS4P32601 143 aa1.79□□□□□ -2.12
VPS55YJR044C SER1P33330 395 aaKnown RBP1.79□□□□□ -2.12
VPS55YJR044C PTH2P34222 208 aa1.79□□□□□ -2.12
VPS55YJR044C TOM71P38825 639 aaKnown RBP1.79□□□□□ -2.12
VPS55YJR044C ERV46P39727 415 aa1.79□□□□□ -2.12
VPS55YJR044C GZF3P42944 551 aaKnown RBP1.79□□□□□ -2.12
VPS55YJR044C YJR120WP47157 116 aa1.79□□□□□ -2.12
VPS55YJR044C PEX8P53248 589 aa1.79□□□□□ -2.12
VPS55YJR044C PTA1Q01329 785 aaPredicted RBP1.79□□□□□ -2.12
VPS55YJR044C TMA64Q04600 565 aaKnown RBP1.79□□□□□ -2.12
VPS55YJR044C ECM22Q05958 814 aaPredicted RBP1.79□□□□□ -2.12
VPS55YJR044C ATP4P05626 244 aa1.78□□□□□ -2.12
VPS55YJR044C BET2P20133 325 aa1.78□□□□□ -2.12
VPS55YJR044C DAL3P32459 195 aa1.78□□□□□ -2.12
VPS55YJR044C TFC4P33339 1025 aa1.78□□□□□ -2.12
VPS55YJR044C VPS24P36095 224 aaKnown RBP1.78□□□□□ -2.12
VPS55YJR044C FUI1P38196 639 aa1.78□□□□□ -2.12
VPS55YJR044C NOC2P39744 710 aaKnown RBP1.78□□□□□ -2.12
VPS55YJR044C YND1P40009 630 aa1.78□□□□□ -2.12
VPS55YJR044C PEA2P40091 420 aa1.78□□□□□ -2.12
VPS55YJR044C MNN11P46985 422 aaKnown RBP1.78□□□□□ -2.12
VPS55YJR044C GPG1P53130 126 aa1.78□□□□□ -2.12
VPS55YJR044C VTC3Q02725 835 aa1.78□□□□□ -2.12
VPS55YJR044C ARA2Q04212 335 aa1.78□□□□□ -2.12
VPS55YJR044C NGL1Q08213 363 aaKnown RBP1.78□□□□□ -2.12
VPS55YJR044C CRT10Q08226 957 aa1.78□□□□□ -2.12
VPS55YJR044C TIP41Q12199 356 aa1.78□□□□□ -2.12
VPS55YJR044C RRI1Q12468 440 aa1.78□□□□□ -2.12
VPS55YJR044C AEP2P22136 580 aa1.77□□□□□ -2.13
VPS55YJR044C AMD2P22580 549 aa1.77□□□□□ -2.13
VPS55YJR044C CNA1P23287 553 aa1.77□□□□□ -2.13
VPS55YJR044C DGR2P32330 852 aa1.77□□□□□ -2.13
VPS55YJR044C RPN12P32496 274 aa1.77□□□□□ -2.13
VPS55YJR044C NIC96P34077 839 aa1.77□□□□□ -2.13
VPS55YJR044C YKL133CP36066 463 aa1.77□□□□□ -2.13
VPS55YJR044C YBR071WP38243 211 aa1.77□□□□□ -2.13
VPS55YJR044C PEF1P53238 335 aa1.77□□□□□ -2.13
VPS55YJR044C BET4Q00618 327 aa1.77□□□□□ -2.13
VPS55YJR044C RAD34Q06665 692 aa1.77□□□□□ -2.13
VPS55YJR044C GSH2Q08220 491 aa1.77□□□□□ -2.13
VPS55YJR044C YOR378WQ08902 515 aa1.77□□□□□ -2.13
VPS55YJR044C YTM1Q12024 460 aaPredicted RBP1.77□□□□□ -2.13
VPS55YJR044C LYS21Q12122 440 aaKnown RBP1.77□□□□□ -2.13
VPS55YJR044C NOP56Q12460 504 aaKnown RBP RIP-Chip data1.77□□□□□ -2.13not detected
VPS55YJR044C NKP1Q12493 238 aa1.77□□□□□ -2.13
VPS55YJR044C RMP1Q12530 201 aa1.77□□□□□ -2.13
VPS55YJR044C MPD2Q99316 277 aa1.77□□□□□ -2.13
VPS55YJR044C INH1P01097 85 aa1.76□□□□□ -2.13
VPS55YJR044C SST2P11972 698 aaKnown RBP1.76□□□□□ -2.13
VPS55YJR044C PHO81P17442 1178 aa1.76□□□□□ -2.13
VPS55YJR044C SAN1P22470 610 aa1.76□□□□□ -2.13
VPS55YJR044C GFD2P25370 566 aaKnown RBP1.76□□□□□ -2.13
VPS55YJR044C SDH8P38345 138 aa1.76□□□□□ -2.13
Retrieved 100 of 5,963 RNA–protein pairs in 34 ms