RNA–Protein interactions for RNA: YJL061W

NUP82, Transcript of Linker nucleoporin component of the nuclear pore complex (NPC), yeast

Gene NUP82, Length 2,142 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NUP82	YJL061W	AAT1	Q01802	451 aa		2.69	□□□□□ -1.98
NUP82	YJL061W	PCL8	Q08966	492 aa		2.69	□□□□□ -1.98
NUP82	YJL061W	CHO2	P05374	869 aa	Known RBP	2.68	□□□□□ -1.98
NUP82	YJL061W	KGD2	P19262	463 aa	Predicted RBP	2.68	□□□□□ -1.98
NUP82	YJL061W	PDE1	P22434	369 aa		2.68	□□□□□ -1.98
NUP82	YJL061W	MSM1	P22438	575 aa		2.68	□□□□□ -1.98
NUP82	YJL061W	GDA1	P32621	518 aa		2.68	□□□□□ -1.98
NUP82	YJL061W	ORC2	P32833	620 aa		2.68	□□□□□ -1.98
NUP82	YJL061W	APD1	P38281	316 aa		2.68	□□□□□ -1.98
NUP82	YJL061W	IMA1	P53051	589 aa		2.68	□□□□□ -1.98
NUP82	YJL061W	YNL092W	P53934	400 aa		2.68	□□□□□ -1.98
NUP82	YJL061W	COQ11	Q05892	277 aa		2.68	□□□□□ -1.98
NUP82	YJL061W	YNL162W-A	Q3E7A8	72 aa		2.68	□□□□□ -1.98
NUP82	YJL061W	AI5_ALPHA	Q9ZZX1	630 aa		2.68	□□□□□ -1.98
NUP82	YJL061W	ADE3	P07245	946 aa	Known RBP	2.68	□□□□□ -1.98
NUP82	YJL061W	ARO9	P38840	513 aa	Predicted RBP	2.68	□□□□□ -1.98
NUP82	YJL061W	TDA10	P42938	290 aa		2.68	□□□□□ -1.98
NUP82	YJL061W	TAX4	P47030	604 aa		2.68	□□□□□ -1.98
NUP82	YJL061W	YNL058C	P53947	316 aa		2.68	□□□□□ -1.98
NUP82	YJL061W	UBP16	Q02863	499 aa		2.68	□□□□□ -1.98
NUP82	YJL061W	MRI1	Q06489	411 aa	Known RBP	2.68	□□□□□ -1.98
NUP82	YJL061W	OSW1	Q08692	278 aa		2.68	□□□□□ -1.98
NUP82	YJL061W	YBR255C-A	Q3E776	120 aa		2.68	□□□□□ -1.98
NUP82	YJL061W	SEC3	P33332	1336 aa	Known RBP	2.67	□□□□□ -1.98
NUP82	YJL061W	BIK1	P11709	440 aa		2.67	□□□□□ -1.98
NUP82	YJL061W	AMD2	P22580	549 aa		2.67	□□□□□ -1.98
NUP82	YJL061W	PWP2	P25635	923 aa	Known RBP	2.67	□□□□□ -1.98
NUP82	YJL061W	GCD7	P32502	381 aa	Predicted RBP	2.67	□□□□□ -1.98
NUP82	YJL061W	SIP1	P32578	815 aa		2.67	□□□□□ -1.98
NUP82	YJL061W	HOT13	P36078	116 aa		2.67	□□□□□ -1.98
NUP82	YJL061W	MRPL36	P36531	177 aa		2.67	□□□□□ -1.98
NUP82	YJL061W	FSH1	P38777	243 aa	Known RBP	2.67	□□□□□ -1.98
NUP82	YJL061W	EXO1	P39875	702 aa		2.67	□□□□□ -1.98
NUP82	YJL061W	SKP2	P42843	763 aa		2.67	□□□□□ -1.98
NUP82	YJL061W	LGE1	Q02796	332 aa	Known RBP	2.67	□□□□□ -1.98
NUP82	YJL061W	BLS1	Q06071	122 aa		2.67	□□□□□ -1.98
NUP82	YJL061W	IRC3	Q06683	689 aa		2.67	□□□□□ -1.98
NUP82	YJL061W	YDL242W	Q07746	117 aa		2.67	□□□□□ -1.98
NUP82	YJL061W	ICL2	Q12031	575 aa		2.67	□□□□□ -1.98
NUP82	YJL061W	LCB4	Q12246	624 aa		2.67	□□□□□ -1.98
NUP82	YJL061W	AQY1	P0CD91	305 aa		2.66	□□□□□ -1.98
NUP82	YJL061W	PET122	P10355	254 aa		2.66	□□□□□ -1.98
NUP82	YJL061W	CLB4	P24871	460 aa		2.66	□□□□□ -1.98
NUP82	YJL061W	SWI4	P25302	1093 aa	Known RBP	2.66	□□□□□ -1.98
NUP82	YJL061W	ARP2	P32381	391 aa	Known RBP	2.66	□□□□□ -1.98
NUP82	YJL061W	MRS6	P32864	603 aa	Known RBP	2.66	□□□□□ -1.98
NUP82	YJL061W	VPS24	P36095	224 aa	Known RBP	2.66	□□□□□ -1.98
NUP82	YJL061W	RPF2	P36160	344 aa	Known RBP	2.66	□□□□□ -1.98
NUP82	YJL061W	PUG1	P40100	303 aa		2.66	□□□□□ -1.98
NUP82	YJL061W	CIR1	P42940	261 aa		2.66	□□□□□ -1.98
NUP82	YJL061W	YML119W	Q03208	357 aa		2.66	□□□□□ -1.98
NUP82	YJL061W	ATG16	Q03818	150 aa		2.66	□□□□□ -1.98
NUP82	YJL061W	RAD33	Q04231	177 aa		2.66	□□□□□ -1.98
NUP82	YJL061W	PLM2	Q04383	521 aa		2.66	□□□□□ -1.98
NUP82	YJL061W	ORM2	Q06144	216 aa		2.66	□□□□□ -1.98
NUP82	YJL061W	BI2	P03873	423 aa		2.66	□□□□□ -1.98
NUP82	YJL061W	ERG11	P10614	530 aa		2.66	□□□□□ -1.98
NUP82	YJL061W	APA1	P16550	321 aa	Known RBP	2.66	□□□□□ -1.98
NUP82	YJL061W	GSY2	P27472	705 aa		2.66	□□□□□ -1.98
NUP82	YJL061W	YJU2	P28320	278 aa	Predicted RBP	2.66	□□□□□ -1.98
NUP82	YJL061W	RPT2	P40327	437 aa	Known RBP	2.66	□□□□□ -1.98
NUP82	YJL061W	SAP185	P40856	1058 aa		2.66	□□□□□ -1.98
NUP82	YJL061W	TRS130	Q03660	1102 aa		2.66	□□□□□ -1.98
NUP82	YJL061W	YML053C	Q04978	212 aa		2.66	□□□□□ -1.98
NUP82	YJL061W	PSR2	Q07949	397 aa		2.66	□□□□□ -1.98
NUP82	YJL061W	RRP43	P25359	394 aa	Predicted RBP	2.65	□□□□□ -1.98
NUP82	YJL061W	YCL049C	P25577	312 aa		2.65	□□□□□ -1.98
NUP82	YJL061W	DBF20	P32328	564 aa		2.65	□□□□□ -1.98
NUP82	YJL061W	YBR138C	P38277	524 aa		2.65	□□□□□ -1.98
NUP82	YJL061W	NPR3	P38742	1146 aa		2.65	□□□□□ -1.98
NUP82	YJL061W	VPS8	P39702	1274 aa		2.65	□□□□□ -1.98
NUP82	YJL061W	CYK3	Q07533	885 aa		2.65	□□□□□ -1.98
NUP82	YJL061W	YPL191C	Q08930	360 aa		2.65	□□□□□ -1.98
NUP82	YJL061W	RDL1	Q12305	139 aa	Known RBP	2.65	□□□□□ -1.98
NUP82	YJL061W	FUN12	P39730	1002 aa	Known RBP	2.65	□□□□□ -1.99
NUP82	YJL061W	SAP1	P39955	897 aa	Known RBP	2.65	□□□□□ -1.99
NUP82	YJL061W	PSF2	P40359	213 aa		2.65	□□□□□ -1.99
NUP82	YJL061W	BST1	P43571	1029 aa		2.65	□□□□□ -1.99
NUP82	YJL061W	ZAP1	P47043	880 aa		2.65	□□□□□ -1.99
NUP82	YJL061W	ATP23	P53722	227 aa		2.65	□□□□□ -1.99
NUP82	YJL061W	MRPL13	Q02204	264 aa		2.65	□□□□□ -1.99
NUP82	YJL061W	MTG1	Q03151	367 aa	Predicted RBP	2.65	□□□□□ -1.99
NUP82	YJL061W	SEG1	Q04279	960 aa		2.65	□□□□□ -1.99
NUP82	YJL061W	HRD3	Q05787	833 aa		2.65	□□□□□ -1.99
NUP82	YJL061W	THI7	Q05998	598 aa		2.65	□□□□□ -1.99
NUP82	YJL061W	SPN1	Q06505	410 aa	Predicted RBP	2.65	□□□□□ -1.99
NUP82	YJL061W	BSP1	Q06604	576 aa		2.65	□□□□□ -1.99
NUP82	YJL061W	SUL2	Q12325	893 aa		2.65	□□□□□ -1.99
NUP82	YJL061W	RVB2	Q12464	471 aa	Known RBP	2.65	□□□□□ -1.99
NUP82	YJL061W	PGK1	P00560	416 aa	Known RBP	2.64	□□□□□ -1.99
NUP82	YJL061W	NUC1	P08466	329 aa		2.64	□□□□□ -1.99
NUP82	YJL061W	DPB3	P27344	201 aa		2.64	□□□□□ -1.99
NUP82	YJL061W	NUP120	P35729	1037 aa		2.64	□□□□□ -1.99
NUP82	YJL061W	KES1	P35844	434 aa	Known RBP	2.64	□□□□□ -1.99
NUP82	YJL061W	VBA2	P38358	474 aa	Known RBP	2.64	□□□□□ -1.99
NUP82	YJL061W	ERC1	P38767	581 aa		2.64	□□□□□ -1.99
NUP82	YJL061W	IES5	P40060	125 aa		2.64	□□□□□ -1.99
NUP82	YJL061W	SAE2	P46946	345 aa		2.64	□□□□□ -1.99
NUP82	YJL061W	GTB1	Q04924	702 aa		2.64	□□□□□ -1.99
NUP82	YJL061W	Q0010	Q9ZZX9	128 aa		2.64	□□□□□ -1.99

Retrieved 100 of 5,963 RNA–protein pairs in 47.5 ms