RNA–Protein interactions for RNA: YHR099W

TRA1, Transcript of Subunit of SAGA and NuA4 histone acetyltransferase complexes, yeastyeast

Gene TRA1, Length 11,235 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRA1YHR099W IRC4Q03036 179 aa2.47□□□□□ -2.01
TRA1YHR099W YMR265CQ03508 461 aaKnown RBP2.47□□□□□ -2.01
TRA1YHR099W FAR10Q06001 478 aa2.47□□□□□ -2.01
TRA1YHR099W PUS7Q08647 676 aaKnown RBP2.47□□□□□ -2.01
TRA1YHR099W RMD5Q12508 421 aa2.47□□□□□ -2.01
TRA1YHR099W APM4Q99186 491 aa2.47□□□□□ -2.01
TRA1YHR099W PDR15Q04182 1529 aaKnown RBP2.47□□□□□ -2.01
TRA1YHR099W IML1P47170 1584 aa2.47□□□□□ -2.01
TRA1YHR099W ERG11P10614 530 aa2.47□□□□□ -2.01
TRA1YHR099W CKI1P20485 582 aa2.47□□□□□ -2.01
TRA1YHR099W OAF3P36023 863 aa2.47□□□□□ -2.01
TRA1YHR099W COS8P38723 381 aa2.47□□□□□ -2.01
TRA1YHR099W VPS52P39904 641 aa2.47□□□□□ -2.01
TRA1YHR099W MSB3P48566 633 aaPredicted RBP2.47□□□□□ -2.01
TRA1YHR099W MNN10P50108 393 aaKnown RBP2.47□□□□□ -2.01
TRA1YHR099W OKP1P53298 406 aa2.47□□□□□ -2.01
TRA1YHR099W SHS1Q07657 551 aa2.47□□□□□ -2.01
TRA1YHR099W BUD7Q08754 746 aa2.47□□□□□ -2.01
TRA1YHR099W YPL199CQ08954 240 aa2.47□□□□□ -2.01
TRA1YHR099W MDY2Q12285 212 aa2.47□□□□□ -2.01
TRA1YHR099W HTA1P04911 132 aaKnown RBP2.47□□□□□ -2.01
TRA1YHR099W HTA2P04912 132 aa2.47□□□□□ -2.01
TRA1YHR099W CPS1P27614 576 aa2.47□□□□□ -2.01
TRA1YHR099W VPH1P32563 840 aaKnown RBP2.47□□□□□ -2.01
TRA1YHR099W JEM1P40358 645 aa2.47□□□□□ -2.01
TRA1YHR099W SCD6P45978 349 aaKnown RBP RIP-Chip data2.47□□□□□ -2.01not detected
TRA1YHR099W STE24P47154 453 aa2.47□□□□□ -2.01
TRA1YHR099W ARH1P48360 493 aa2.47□□□□□ -2.01
TRA1YHR099W SAE3P89114 91 aa2.47□□□□□ -2.01
TRA1YHR099W MYO5Q04439 1219 aaKnown RBP2.47□□□□□ -2.01
TRA1YHR099W ADH6Q04894 360 aaKnown RBP2.47□□□□□ -2.01
TRA1YHR099W TFB4Q12004 338 aa2.47□□□□□ -2.01
TRA1YHR099W RHO1P06780 209 aaKnown RBP2.47□□□□□ -2.01
TRA1YHR099W SEC63P14906 663 aa2.47□□□□□ -2.01
TRA1YHR099W CCA1P21269 546 aa2.47□□□□□ -2.01
TRA1YHR099W CRM1P30822 1084 aaKnown RBP2.47□□□□□ -2.01
TRA1YHR099W BSD2P38356 321 aa2.47□□□□□ -2.01
TRA1YHR099W XPT1P47165 209 aa2.47□□□□□ -2.01
TRA1YHR099W STR3P53101 465 aaKnown RBP2.47□□□□□ -2.01
TRA1YHR099W CAF120P53836 1060 aa2.47□□□□□ -2.01
TRA1YHR099W YNL193WP53870 558 aa2.47□□□□□ -2.01
TRA1YHR099W EAF1Q06337 982 aa2.47□□□□□ -2.01
TRA1YHR099W SUB2Q07478 446 aaKnown RBP2.47□□□□□ -2.01
TRA1YHR099W RPL7AP05737 244 aaKnown RBP2.47□□□□□ -2.01
TRA1YHR099W RPC40P07703 335 aaKnown RBP2.47□□□□□ -2.01
TRA1YHR099W NPP1P25353 742 aa2.47□□□□□ -2.01
TRA1YHR099W ATP7P30902 174 aa2.47□□□□□ -2.01
TRA1YHR099W NUP120P35729 1037 aa2.47□□□□□ -2.01
TRA1YHR099W RGI1P40043 161 aaPredicted RBP2.47□□□□□ -2.01
TRA1YHR099W NET1P47035 1189 aa2.47□□□□□ -2.01
TRA1YHR099W LIA1P47120 325 aaKnown RBP2.47□□□□□ -2.01
TRA1YHR099W YGR125WP53273 1036 aa2.47□□□□□ -2.01
TRA1YHR099W PBP1P53297 722 aaKnown RBP2.47□□□□□ -2.01
TRA1YHR099W SSP2Q08646 371 aa2.47□□□□□ -2.01
TRA1YHR099W YOR214CQ12282 236 aa2.47□□□□□ -2.01
TRA1YHR099W AHC1Q12433 566 aa2.47□□□□□ -2.01
TRA1YHR099W MAK31P23059 88 aa2.46□□□□□ -2.01
TRA1YHR099W ADY2P25613 283 aa2.46□□□□□ -2.01
TRA1YHR099W LYP1P32487 611 aa2.46□□□□□ -2.01
TRA1YHR099W YIL092WP40497 633 aa2.46□□□□□ -2.01
TRA1YHR099W JAC1P53193 184 aa2.46□□□□□ -2.01
TRA1YHR099W TRM44Q02648 567 aaKnown RBP2.46□□□□□ -2.01
TRA1YHR099W MUK1Q02866 612 aa2.46□□□□□ -2.01
TRA1YHR099W GRE2Q12068 342 aaKnown RBP2.46□□□□□ -2.01
TRA1YHR099W SKS1Q12505 502 aa2.46□□□□□ -2.01
TRA1YHR099W STF1P01098 86 aa2.46□□□□□ -2.02
TRA1YHR099W LCB1P25045 558 aaKnown RBP2.46□□□□□ -2.02
TRA1YHR099W VMA6P32366 345 aaKnown RBP2.46□□□□□ -2.02
TRA1YHR099W RPN10P38886 268 aaKnown RBP2.46□□□□□ -2.02
TRA1YHR099W FHL1P39521 936 aa2.46□□□□□ -2.02
TRA1YHR099W FAR7P43592 221 aa2.46□□□□□ -2.02
TRA1YHR099W MOG1P47123 218 aa2.46□□□□□ -2.02
TRA1YHR099W TEL2P53038 688 aa2.46□□□□□ -2.02
TRA1YHR099W NUP116Q02630 1113 aa2.46□□□□□ -2.02
TRA1YHR099W YEH1Q07804 573 aa2.46□□□□□ -2.02
TRA1YHR099W DIA2Q08496 732 aaPredicted RBP2.46□□□□□ -2.02
TRA1YHR099W MUM3Q08750 479 aa2.46□□□□□ -2.02
TRA1YHR099W CWC2Q12046 339 aaPredicted RBP2.46□□□□□ -2.02
TRA1YHR099W SPE3Q12074 293 aaKnown RBP2.46□□□□□ -2.02
TRA1YHR099W DCN1Q12395 269 aa2.46□□□□□ -2.02
TRA1YHR099W YBL113CQ7M4S9 792 aa2.46□□□□□ -2.02
TRA1YHR099W SDH2P21801 266 aa2.46□□□□□ -2.02
TRA1YHR099W MIH1P23748 554 aa2.46□□□□□ -2.02
TRA1YHR099W GLC3P32775 704 aa2.46□□□□□ -2.02
TRA1YHR099W YER034WP40022 185 aaKnown RBP2.46□□□□□ -2.02
TRA1YHR099W TPA1P40032 644 aaKnown RBP2.46□□□□□ -2.02
TRA1YHR099W SGN1P40561 250 aaKnown RBP RIP-Chip data2.46□□□□□ -2.02not detected
TRA1YHR099W ERV14P53173 138 aa2.46□□□□□ -2.02
TRA1YHR099W GPI1P53306 609 aa2.46□□□□□ -2.02
TRA1YHR099W GCN5Q03330 439 aa2.46□□□□□ -2.02
TRA1YHR099W YLR297WQ05899 129 aa2.46□□□□□ -2.02
TRA1YHR099W BOP2Q06150 570 aa2.46□□□□□ -2.02
TRA1YHR099W NUP157P40064 1391 aaKnown RBP2.46□□□□□ -2.02
TRA1YHR099W ADE3P07245 946 aaKnown RBP2.46□□□□□ -2.02
TRA1YHR099W CCT5P40413 562 aaKnown RBP2.46□□□□□ -2.02
TRA1YHR099W PSA1P41940 361 aaKnown RBP2.46□□□□□ -2.02
TRA1YHR099W YJR098CP47139 656 aa2.46□□□□□ -2.02
TRA1YHR099W CSI1Q04368 295 aa2.46□□□□□ -2.02
TRA1YHR099W TCO89Q08921 799 aa2.46□□□□□ -2.02
TRA1YHR099W GLK1P17709 500 aaKnown RBP2.46□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 18.8 ms