RNA–Protein interactions for RNA: YGR156W

PTI1, Transcript of Essential component of CPF (cleavage and polyadenylation factor), yeast

Gene PTI1, Length 1,278 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PTI1	YGR156W	TY2B-C	P25384	1770 aa		4.05	□□□□□ -1.76
PTI1	YGR156W	TY2B-DR2	Q03494	1770 aa		4.05	□□□□□ -1.76
PTI1	YGR156W	TY1B-DR1	Q03855	1755 aa		4.05	□□□□□ -1.76
PTI1	YGR156W	TY2B-DR3	Q07791	1770 aa	Known RBP	4.05	□□□□□ -1.76
PTI1	YGR156W	TY2B-OR1	Q12113	1770 aa		4.05	□□□□□ -1.76
PTI1	YGR156W	TY2B-DR1	Q12472	1770 aa		4.05	□□□□□ -1.76
PTI1	YGR156W	TY2B-OR2	Q12501	1770 aa		4.05	□□□□□ -1.76
PTI1	YGR156W	SEC18	P18759	758 aa	Known RBP	4.05	□□□□□ -1.76
PTI1	YGR156W	PRE4	P30657	266 aa		4.05	□□□□□ -1.76
PTI1	YGR156W	MRPL9	P31334	269 aa		4.05	□□□□□ -1.76
PTI1	YGR156W	MSS1	P32559	526 aa	Predicted RBP	4.05	□□□□□ -1.76
PTI1	YGR156W	CDS1	P38221	457 aa		4.05	□□□□□ -1.76
PTI1	YGR156W	PIH1	P38768	344 aa		4.05	□□□□□ -1.76
PTI1	YGR156W	DUN1	P39009	513 aa		4.05	□□□□□ -1.76
PTI1	YGR156W	MAD3	P47074	515 aa		4.05	□□□□□ -1.76
PTI1	YGR156W	CPR6	P53691	371 aa	Known RBP	4.05	□□□□□ -1.76
PTI1	YGR156W	ARC35	P53731	342 aa	Known RBP	4.05	□□□□□ -1.76
PTI1	YGR156W	YNR071C	P53757	342 aa		4.05	□□□□□ -1.76
PTI1	YGR156W	COG4	Q06096	861 aa		4.05	□□□□□ -1.76
PTI1	YGR156W	TFC6	Q06339	672 aa		4.05	□□□□□ -1.76
PTI1	YGR156W	OPY2	Q06810	360 aa		4.05	□□□□□ -1.76
PTI1	YGR156W	TSC11	P40061	1430 aa		4.04	□□□□□ -1.76
PTI1	YGR156W	TRM3	Q07527	1436 aa		4.04	□□□□□ -1.76
PTI1	YGR156W	VAS1	P07806	1104 aa	Known RBP	4.04	□□□□□ -1.76
PTI1	YGR156W	MTF2	P10849	440 aa		4.04	□□□□□ -1.76
PTI1	YGR156W	HSC82	P15108	705 aa	Known RBP	4.04	□□□□□ -1.76
PTI1	YGR156W	PRP22	P24384	1145 aa	Known RBP	4.04	□□□□□ -1.76
PTI1	YGR156W	CWH43	P25618	953 aa		4.04	□□□□□ -1.76
PTI1	YGR156W	PRP45	P28004	379 aa	Predicted RBP	4.04	□□□□□ -1.76
PTI1	YGR156W	FRD1	P32614	470 aa	Known RBP	4.04	□□□□□ -1.76
PTI1	YGR156W	BEM3	P32873	1128 aa		4.04	□□□□□ -1.76
PTI1	YGR156W	STT3	P39007	718 aa	Known RBP	4.04	□□□□□ -1.76
PTI1	YGR156W	PRM2	P40534	656 aa		4.04	□□□□□ -1.76
PTI1	YGR156W	PXA1	P41909	870 aa		4.04	□□□□□ -1.76
PTI1	YGR156W	YDL183C	P48569	320 aa		4.04	□□□□□ -1.76
PTI1	YGR156W	SNF12	P53628	566 aa		4.04	□□□□□ -1.76
PTI1	YGR156W	ATP23	P53722	227 aa		4.04	□□□□□ -1.76
PTI1	YGR156W	YPL068C	Q02749	293 aa		4.04	□□□□□ -1.76
PTI1	YGR156W	PPN1	Q04119	674 aa		4.04	□□□□□ -1.76
PTI1	YGR156W	IZH3	Q07959	543 aa		4.04	□□□□□ -1.76
PTI1	YGR156W	GEP3	Q08622	556 aa		4.04	□□□□□ -1.76
PTI1	YGR156W	CIR2	Q08822	631 aa		4.04	□□□□□ -1.76
PTI1	YGR156W	DBP10	Q12389	995 aa	Known RBP	4.04	□□□□□ -1.76
PTI1	YGR156W	YOL087C	Q99247	1116 aa		4.04	□□□□□ -1.76
PTI1	YGR156W	SNT2	P53127	1403 aa		4.04	□□□□□ -1.76
PTI1	YGR156W	SIR1	P21691	654 aa		4.03	□□□□□ -1.76
PTI1	YGR156W	YCL049C	P25577	312 aa		4.03	□□□□□ -1.76
PTI1	YGR156W	RMA1	P36001	430 aa	Known RBP	4.03	□□□□□ -1.76
PTI1	YGR156W	TAF5	P38129	798 aa		4.03	□□□□□ -1.76
PTI1	YGR156W	APM3	P38153	483 aa		4.03	□□□□□ -1.76
PTI1	YGR156W	PSY4	P38193	441 aa		4.03	□□□□□ -1.76
PTI1	YGR156W	ERP2	P39704	215 aa		4.03	□□□□□ -1.76
PTI1	YGR156W	VPS27	P40343	622 aa	Known RBP	4.03	□□□□□ -1.76
PTI1	YGR156W	BNA1	P47096	177 aa		4.03	□□□□□ -1.76
PTI1	YGR156W	GTR1	Q00582	310 aa		4.03	□□□□□ -1.76
PTI1	YGR156W	TRS23	Q03784	219 aa		4.03	□□□□□ -1.76
PTI1	YGR156W	TDA9	Q04545	1251 aa		4.03	□□□□□ -1.76
PTI1	YGR156W	BLS1	Q06071	122 aa		4.03	□□□□□ -1.76
PTI1	YGR156W	HIM1	Q06674	414 aa		4.03	□□□□□ -1.76
PTI1	YGR156W	MYO4	P32492	1471 aa		4.03	□□□□□ -1.76
PTI1	YGR156W	DNF2	Q12675	1612 aa		4.03	□□□□□ -1.77
PTI1	YGR156W	TY1B-H	O13535	1793 aa		4.02	□□□□□ -1.77
PTI1	YGR156W	TY1B-DR5	P0C2I2	1755 aa		4.02	□□□□□ -1.77
PTI1	YGR156W	TY1B-DR6	P0C2I3	1755 aa		4.02	□□□□□ -1.77
PTI1	YGR156W	TY1B-LR2	P0C2I5	1755 aa		4.02	□□□□□ -1.77
PTI1	YGR156W	TY1B-LR3	P0C2I6	1755 aa	Known RBP	4.02	□□□□□ -1.77
PTI1	YGR156W	TY1B-PR1	P0C2I9	1755 aa	Known RBP	4.02	□□□□□ -1.77
PTI1	YGR156W	TY1B-PR2	P0C2J0	1756 aa		4.02	□□□□□ -1.77
PTI1	YGR156W	TY1B-PR3	P0C2J1	1755 aa	Known RBP	4.02	□□□□□ -1.77
PTI1	YGR156W	TY1B-JR1	P47098	1755 aa		4.02	□□□□□ -1.77
PTI1	YGR156W	TY1B-ML2	Q03434	1755 aa	Known RBP	4.02	□□□□□ -1.77
PTI1	YGR156W	TY1B-ER1	Q03612	1755 aa		4.02	□□□□□ -1.77
PTI1	YGR156W	TY1B-ML1	Q04711	1755 aa	Known RBP	4.02	□□□□□ -1.77
PTI1	YGR156W	TY1B-GR2	Q12269	1755 aa		4.02	□□□□□ -1.77
PTI1	YGR156W	TY1B-OL	Q12273	1755 aa		4.02	□□□□□ -1.77
PTI1	YGR156W	TY1B-PL	Q12414	1755 aa	Known RBP	4.02	□□□□□ -1.77
PTI1	YGR156W	BIK1	P11709	440 aa		4.02	□□□□□ -1.77
PTI1	YGR156W	NCP1	P16603	691 aa	Known RBP	4.02	□□□□□ -1.77
PTI1	YGR156W	CBP3	P21560	335 aa		4.02	□□□□□ -1.77
PTI1	YGR156W	MCM3	P24279	971 aa	Known RBP	4.02	□□□□□ -1.77
PTI1	YGR156W	XRS2	P33301	854 aa		4.02	□□□□□ -1.77
PTI1	YGR156W	MEP2	P41948	499 aa		4.02	□□□□□ -1.77
PTI1	YGR156W	SPO1	P53541	631 aa		4.02	□□□□□ -1.77
PTI1	YGR156W	NEW1	Q08972	1196 aa	Known RBP	4.02	□□□□□ -1.77
PTI1	YGR156W	YOR1	P53049	1477 aa		4.02	□□□□□ -1.77
PTI1	YGR156W	NUP170	P38181	1502 aa		4.01	□□□□□ -1.77
PTI1	YGR156W	URA3	P03962	267 aa		4.01	□□□□□ -1.77
PTI1	YGR156W	HMG2	P12684	1045 aa		4.01	□□□□□ -1.77
PTI1	YGR156W	STE4	P18851	423 aa		4.01	□□□□□ -1.77
PTI1	YGR156W	IMP2'	P32351	346 aa		4.01	□□□□□ -1.77
PTI1	YGR156W	MCM10	P32354	571 aa		4.01	□□□□□ -1.77
PTI1	YGR156W	RRN3	P36070	627 aa		4.01	□□□□□ -1.77
PTI1	YGR156W	PUG1	P40100	303 aa		4.01	□□□□□ -1.77
PTI1	YGR156W	AAD4	Q07747	329 aa		4.01	□□□□□ -1.77
PTI1	YGR156W	ZPS1	Q12512	249 aa		4.01	□□□□□ -1.77
PTI1	YGR156W	YOR093C	Q12275	1648 aa		4.01	□□□□□ -1.77
PTI1	YGR156W	TUP1	P16649	713 aa		4	□□□□□ -1.77
PTI1	YGR156W	ARG1	P22768	420 aa		4	□□□□□ -1.77
PTI1	YGR156W	RPN12	P32496	274 aa		4	□□□□□ -1.77
PTI1	YGR156W	YHR033W	P38690	423 aa		4	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 26.8 ms