RNA–Protein interactions for RNA: YGR109W-B

YGR109W-B, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeastyeast

Gene YGR109W-B, Length 4,644 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YGR109W-BYGR109W-B TIM23P32897 222 aa1.73□□□□□ -2.13
YGR109W-BYGR109W-B SET3P36124 751 aa1.73□□□□□ -2.13
YGR109W-BYGR109W-B YMR262WP38430 313 aa1.73□□□□□ -2.13
YGR109W-BYGR109W-B SNO3P43544 222 aa1.73□□□□□ -2.13
YGR109W-BYGR109W-B YJR008WP47085 338 aa1.73□□□□□ -2.13
YGR109W-BYGR109W-B ATP22P50273 684 aaPredicted RBP1.73□□□□□ -2.13
YGR109W-BYGR109W-B NUP84P52891 726 aa1.73□□□□□ -2.13
YGR109W-BYGR109W-B TOF1P53840 1238 aa1.73□□□□□ -2.13
YGR109W-BYGR109W-B ECM30Q06673 1274 aa1.73□□□□□ -2.13
YGR109W-BYGR109W-B YPL216WQ08964 1102 aa1.73□□□□□ -2.13
YGR109W-BYGR109W-B ERR1P0CX10 437 aa1.73□□□□□ -2.13
YGR109W-BYGR109W-B ERR2P0CX11 437 aa1.73□□□□□ -2.13
YGR109W-BYGR109W-B MTF2P10849 440 aa1.73□□□□□ -2.13
YGR109W-BYGR109W-B KRS1P15180 591 aaKnown RBP1.73□□□□□ -2.13
YGR109W-BYGR109W-B MSH1P25846 959 aa1.73□□□□□ -2.13
YGR109W-BYGR109W-B NPL6P32832 435 aa1.73□□□□□ -2.13
YGR109W-BYGR109W-B COS111P38308 924 aa1.73□□□□□ -2.13
YGR109W-BYGR109W-B MGS1P40151 587 aa1.73□□□□□ -2.13
YGR109W-BYGR109W-B LOC1P43586 204 aaPredicted RBP1.73□□□□□ -2.13
YGR109W-BYGR109W-B BRE5P53741 515 aaKnown RBP1.73□□□□□ -2.13
YGR109W-BYGR109W-B UBX4P54730 416 aa1.73□□□□□ -2.13
YGR109W-BYGR109W-B ISA1Q07821 250 aaPredicted RBP1.73□□□□□ -2.13
YGR109W-BYGR109W-B AIM41Q12032 185 aa1.73□□□□□ -2.13
YGR109W-BYGR109W-B APM4Q99186 491 aa1.73□□□□□ -2.13
YGR109W-BYGR109W-B TY3B-GQ99315 1547 aa1.73□□□□□ -2.13
YGR109W-BYGR109W-B PDE2P06776 526 aa1.73□□□□□ -2.13
YGR109W-BYGR109W-B HMG1P12683 1054 aa1.73□□□□□ -2.13
YGR109W-BYGR109W-B SFL1P20134 766 aa1.73□□□□□ -2.13
YGR109W-BYGR109W-B MIH1P23748 554 aa1.73□□□□□ -2.13
YGR109W-BYGR109W-B LCB1P25045 558 aaKnown RBP1.73□□□□□ -2.13
YGR109W-BYGR109W-B PRO3P32263 286 aaKnown RBP1.73□□□□□ -2.13
YGR109W-BYGR109W-B ECM32P32644 1121 aaKnown RBP1.73□□□□□ -2.13
YGR109W-BYGR109W-B RPC37P36121 282 aa1.73□□□□□ -2.13
YGR109W-BYGR109W-B YMR124WP39523 943 aaKnown RBP1.73□□□□□ -2.13
YGR109W-BYGR109W-B TPM2P40414 161 aa1.73□□□□□ -2.13
YGR109W-BYGR109W-B SKP2P42843 763 aa1.73□□□□□ -2.13
YGR109W-BYGR109W-B CAF130P53280 1122 aaPredicted RBP1.73□□□□□ -2.13
YGR109W-BYGR109W-B COQ6P53318 479 aa1.73□□□□□ -2.13
YGR109W-BYGR109W-B RNH1Q04740 348 aa1.73□□□□□ -2.13
YGR109W-BYGR109W-B FAP7Q12055 197 aaPredicted RBP1.73□□□□□ -2.13
YGR109W-BYGR109W-B HUA2Q12134 243 aa1.73□□□□□ -2.13
YGR109W-BYGR109W-B RGT2Q12300 763 aa1.73□□□□□ -2.13
YGR109W-BYGR109W-B ISA2Q12425 185 aa1.73□□□□□ -2.13
YGR109W-BYGR109W-B PHO5P00635 467 aa1.73□□□□□ -2.13
YGR109W-BYGR109W-B MIS1P09440 975 aaKnown RBP1.73□□□□□ -2.13
YGR109W-BYGR109W-B ERG11P10614 530 aa1.73□□□□□ -2.13
YGR109W-BYGR109W-B MDM10P18409 493 aa1.73□□□□□ -2.13
YGR109W-BYGR109W-B PMA2P19657 947 aa1.73□□□□□ -2.13
YGR109W-BYGR109W-B ERG6P25087 383 aaKnown RBP1.73□□□□□ -2.13
YGR109W-BYGR109W-B NPR3P38742 1146 aa1.73□□□□□ -2.13
YGR109W-BYGR109W-B MIT1P40002 666 aa1.73□□□□□ -2.13
YGR109W-BYGR109W-B ASN1P49089 572 aaKnown RBP1.73□□□□□ -2.13
YGR109W-BYGR109W-B SDA1P53313 767 aaKnown RBP1.73□□□□□ -2.13
YGR109W-BYGR109W-B HFD1Q04458 532 aa1.73□□□□□ -2.13
YGR109W-BYGR109W-B RPL7AP05737 244 aaKnown RBP1.72□□□□□ -2.13
YGR109W-BYGR109W-B SEC12P11655 471 aa1.72□□□□□ -2.13
YGR109W-BYGR109W-B MRP7P12687 371 aa1.72□□□□□ -2.13
YGR109W-BYGR109W-B AEP2P22136 580 aa1.72□□□□□ -2.13
YGR109W-BYGR109W-B APN1P22936 367 aa1.72□□□□□ -2.13
YGR109W-BYGR109W-B TDA3P38758 523 aa1.72□□□□□ -2.13
YGR109W-BYGR109W-B YHR202WP38887 602 aa1.72□□□□□ -2.13
YGR109W-BYGR109W-B RMD8P43620 662 aa1.72□□□□□ -2.13
YGR109W-BYGR109W-B STB2P46679 850 aa1.72□□□□□ -2.13
YGR109W-BYGR109W-B YJR030CP47101 745 aa1.72□□□□□ -2.13
YGR109W-BYGR109W-B YGL117WP53133 265 aa1.72□□□□□ -2.13
YGR109W-BYGR109W-B DIP5P53388 608 aa1.72□□□□□ -2.13
YGR109W-BYGR109W-B MPS1P54199 764 aa1.72□□□□□ -2.13
YGR109W-BYGR109W-B DCS2Q12123 353 aa1.72□□□□□ -2.13
YGR109W-BYGR109W-B RPL7BQ12213 244 aaKnown RBP1.72□□□□□ -2.13
YGR109W-BYGR109W-B ACO1P19414 778 aaKnown RBP RIP-Chip data1.72□□□□□ -2.13not detected
YGR109W-BYGR109W-B VPS1P21576 704 aaKnown RBP1.72□□□□□ -2.13
YGR109W-BYGR109W-B PAH1P32567 862 aa1.72□□□□□ -2.13
YGR109W-BYGR109W-B DID4P36108 232 aa1.72□□□□□ -2.13
YGR109W-BYGR109W-B ERC1P38767 581 aa1.72□□□□□ -2.13
YGR109W-BYGR109W-B KAP123P40069 1113 aaKnown RBP1.72□□□□□ -2.13
YGR109W-BYGR109W-B GAT1P43574 510 aa1.72□□□□□ -2.13
YGR109W-BYGR109W-B RFX1P48743 811 aa1.72□□□□□ -2.13
YGR109W-BYGR109W-B NBP1P52919 319 aaPredicted RBP1.72□□□□□ -2.13
YGR109W-BYGR109W-B RNH70P53331 553 aa1.72□□□□□ -2.13
YGR109W-BYGR109W-B EAF7P53911 425 aaKnown RBP1.72□□□□□ -2.13
YGR109W-BYGR109W-B ZDS2P54786 942 aa1.72□□□□□ -2.13
YGR109W-BYGR109W-B NTG2Q08214 380 aa1.72□□□□□ -2.13
YGR109W-BYGR109W-B CRT10Q08226 957 aa1.72□□□□□ -2.13
YGR109W-BYGR109W-B SEY1Q99287 776 aa1.72□□□□□ -2.13
YGR109W-BYGR109W-B Q0142Q9ZZW4 58 aa1.72□□□□□ -2.13
YGR109W-BYGR109W-B SWI6P09959 803 aa1.72□□□□□ -2.13
YGR109W-BYGR109W-B STE12P13574 688 aa1.72□□□□□ -2.13
YGR109W-BYGR109W-B SEN2P16658 377 aa1.72□□□□□ -2.13
YGR109W-BYGR109W-B MBR1P23493 339 aa1.72□□□□□ -2.13
YGR109W-BYGR109W-B APE3P37302 537 aaKnown RBP1.72□□□□□ -2.13
YGR109W-BYGR109W-B VPS45P38932 577 aa1.72□□□□□ -2.13
YGR109W-BYGR109W-B YEL057CP39983 233 aa1.72□□□□□ -2.13
YGR109W-BYGR109W-B DJP1P40564 432 aa1.72□□□□□ -2.13
YGR109W-BYGR109W-B BPL1P48445 690 aaPredicted RBP1.72□□□□□ -2.13
YGR109W-BYGR109W-B LSG1P53145 640 aaKnown RBP1.72□□□□□ -2.13
YGR109W-BYGR109W-B RSC1P53236 928 aa1.72□□□□□ -2.13
YGR109W-BYGR109W-B ARP4P80428 489 aa1.72□□□□□ -2.13
YGR109W-BYGR109W-B PTA1Q01329 785 aaPredicted RBP1.72□□□□□ -2.13
YGR109W-BYGR109W-B MTD1Q02046 320 aaKnown RBP1.72□□□□□ -2.13
YGR109W-BYGR109W-B ERG27Q12452 347 aaKnown RBP1.72□□□□□ -2.13
Retrieved 100 of 5,963 RNA–protein pairs in 81.5 ms